FFCP PHASE1:Hg19::chr3:119813302..119813318,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2932 | |EntrezGene=2932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4617 | |HGNC=4617 | ||
|TSSclassifier=strong | |||
|UniProt=P49841,Q6FI27 | |UniProt=P49841,Q6FI27 | ||
|association_with_transcript=-38bp_to_ENST00000264235,NM_001146156,NM_002093,uc003edn.2,uc003edo.2_5end | |association_with_transcript=-38bp_to_ENST00000264235,NM_001146156,NM_002093,uc003edn.2,uc003edo.2_5end | ||
|cluster_id=chr3:119813302..119813318,- | |||
|description=CAGE_peak_2_at_GSK3B_5end | |description=CAGE_peak_2_at_GSK3B_5end | ||
|id=chr3:119813302..119813318,- | |id=chr3:119813302..119813318,- | ||
|ontology_enrichment_celltype=CL:0000738!1.49e-08!140;CL:0000766!1.34e-07!76 | |ontology_enrichment_celltype=CL:0000738!1.49e-08!140;CL:0000766!1.34e-07!76 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.33e-09,136;CL:0000766,5.15e-09,72;CL:0000557,2.06e-07,67;CL:0002031,4.82e-07,120;CL:0002087,7.92e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.86e-18!115;UBERON:0001049!1.11e-13!57;UBERON:0005068!1.11e-13!57;UBERON:0006241!1.11e-13!57;UBERON:0007135!1.11e-13!57;UBERON:0002780!1.31e-12!41;UBERON:0001890!1.31e-12!41;UBERON:0006240!1.31e-12!41;UBERON:0002616!1.59e-12!59;UBERON:0003080!1.63e-12!42;UBERON:0001017!8.67e-12!82;UBERON:0005743!9.87e-12!86;UBERON:0000955!1.88e-11!69;UBERON:0006238!1.88e-11!69;UBERON:0002619!4.65e-11!22;UBERON:0001893!1.25e-10!34;UBERON:0001869!2.33e-10!32;UBERON:0000073!2.35e-10!94;UBERON:0001016!2.35e-10!94;UBERON:0002020!2.63e-10!34;UBERON:0003528!2.63e-10!34;UBERON:0001950!3.67e-10!20;UBERON:0002791!3.95e-10!33;UBERON:0000956!2.03e-09!25;UBERON:0000203!2.03e-09!25;UBERON:0003075!1.07e-08!86;UBERON:0007284!1.07e-08!86;UBERON:0002390!1.73e-08!102;UBERON:0003061!1.73e-08!102;UBERON:0003056!2.07e-08!61;UBERON:0002346!1.69e-07!90;UBERON:0000153!2.45e-07!129;UBERON:0007811!2.45e-07!129;UBERON:0000033!7.21e-07!123;UBERON:0004121!8.72e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!8.86e-18!115;UBERON:0001049!1.11e-13!57;UBERON:0005068!1.11e-13!57;UBERON:0006241!1.11e-13!57;UBERON:0007135!1.11e-13!57;UBERON:0002780!1.31e-12!41;UBERON:0001890!1.31e-12!41;UBERON:0006240!1.31e-12!41;UBERON:0002616!1.59e-12!59;UBERON:0003080!1.63e-12!42;UBERON:0001017!8.67e-12!82;UBERON:0005743!9.87e-12!86;UBERON:0000955!1.88e-11!69;UBERON:0006238!1.88e-11!69;UBERON:0002619!4.65e-11!22;UBERON:0001893!1.25e-10!34;UBERON:0001869!2.33e-10!32;UBERON:0000073!2.35e-10!94;UBERON:0001016!2.35e-10!94;UBERON:0002020!2.63e-10!34;UBERON:0003528!2.63e-10!34;UBERON:0001950!3.67e-10!20;UBERON:0002791!3.95e-10!33;UBERON:0000956!2.03e-09!25;UBERON:0000203!2.03e-09!25;UBERON:0003075!1.07e-08!86;UBERON:0007284!1.07e-08!86;UBERON:0002390!1.73e-08!102;UBERON:0003061!1.73e-08!102;UBERON:0003056!2.07e-08!61;UBERON:0002346!1.69e-07!90;UBERON:0000153!2.45e-07!129;UBERON:0007811!2.45e-07!129;UBERON:0000033!7.21e-07!123;UBERON:0004121!8.72e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.90e-11;22!UBERON:0001950;3.97e-10;20!UBERON:0000956;1.93e-09;25!UBERON:0000203;1.93e-09;25!UBERON:0001893;2.74e-09;34!UBERON:0001869;4.32e-09;32!UBERON:0003528;4.44e-09;34!UBERON:0002020;4.44e-09;34!UBERON:0002780;5.57e-09;41!UBERON:0001890;5.57e-09;41!UBERON:0002791;9.10e-09;32!UBERON:0000073;2.17e-08;53!UBERON:0002616;2.17e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.79e-17,114;UBERON:0001049,9.64e-14,56;UBERON:0005068,9.64e-14,56;UBERON:0006241,9.64e-14,56;UBERON:0007135,9.64e-14,56;UBERON:0000073,1.90e-13,53;UBERON:0002616,1.90e-13,53;UBERON:0002780,1.31e-12,41;UBERON:0001890,1.31e-12,41;UBERON:0003080,1.31e-12,41;UBERON:0006240,1.31e-12,41;UBERON:0001017,8.74e-12,81;UBERON:0000955,1.85e-11,68;UBERON:0006238,1.85e-11,68;UBERON:0002619,4.65e-11,22;UBERON:0001893,1.25e-10,34;UBERON:0001869,2.33e-10,32;UBERON:0001016,2.44e-10,89;UBERON:0003528,2.63e-10,34;UBERON:0002020,2.63e-10,34;UBERON:0001950,3.67e-10,20;UBERON:0002791,6.69e-10,32;UBERON:0002390,9.28e-10,98;UBERON:0003061,9.28e-10,98;UBERON:0000956,2.03e-09,25;UBERON:0000203,2.03e-09,25;UBERON:0003075,1.28e-08,82;UBERON:0007284,1.28e-08,82;UBERON:0003056,6.04e-08,61;UBERON:0002346,2.13e-07,86;UBERON:0010371,2.37e-07,104;UBERON:0002193,2.65e-07,108 | |||
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| ||
|short_description=p2@GSK3B | |short_description=p2@GSK3B | ||
}} | }} |
Latest revision as of 21:25, 19 September 2015
Short description: | p2@GSK3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GSK3B_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000264235, NM_001146156, NM_002093, uc003edn.2, uc003edo.2_5end |
EntrezGene: | GSK3B |
HGNC: | 4617 |
UniProt: | P49841Q6FI27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.33e-09 | 136 |
myeloid leukocyte | 5.15e-09 | 72 |
granulocyte monocyte progenitor cell | 2.06e-07 | 67 |
hematopoietic lineage restricted progenitor cell | 4.82e-07 | 120 |
nongranular leukocyte | 7.92e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.79e-17 | 114 |
neural tube | 9.64e-14 | 56 |
neural rod | 9.64e-14 | 56 |
future spinal cord | 9.64e-14 | 56 |
neural keel | 9.64e-14 | 56 |
regional part of nervous system | 1.90e-13 | 53 |
regional part of brain | 1.90e-13 | 53 |
regional part of forebrain | 1.31e-12 | 41 |
forebrain | 1.31e-12 | 41 |
anterior neural tube | 1.31e-12 | 41 |
future forebrain | 1.31e-12 | 41 |
central nervous system | 8.74e-12 | 81 |
brain | 1.85e-11 | 68 |
future brain | 1.85e-11 | 68 |
regional part of cerebral cortex | 4.65e-11 | 22 |
telencephalon | 1.25e-10 | 34 |
cerebral hemisphere | 2.33e-10 | 32 |
nervous system | 2.44e-10 | 89 |
brain grey matter | 2.63e-10 | 34 |
gray matter | 2.63e-10 | 34 |
neocortex | 3.67e-10 | 20 |
regional part of telencephalon | 6.69e-10 | 32 |
hematopoietic system | 9.28e-10 | 98 |
blood island | 9.28e-10 | 98 |
cerebral cortex | 2.03e-09 | 25 |
pallium | 2.03e-09 | 25 |
neural plate | 1.28e-08 | 82 |
presumptive neural plate | 1.28e-08 | 82 |
pre-chordal neural plate | 6.04e-08 | 61 |
neurectoderm | 2.13e-07 | 86 |
ecto-epithelium | 2.37e-07 | 104 |
hemolymphoid system | 2.65e-07 | 108 |