FFCP PHASE1:Hg19::chr3:12045814..12045834,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:12045814..12045834,+
|short_description=p2@SYN2
|description=CAGE_peak_2_at_SYN2_5end
|association_with_transcript=-27bp_to_ENST00000540660,NM_003178,NM_13...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6854 | |EntrezGene=6854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11495 | |HGNC=11495 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7H8,Q86VA8 | |UniProt=F5H7H8,Q86VA8 | ||
|association_with_transcript=-27bp_to_ENST00000540660,NM_003178,NM_133625,uc003bwl.1,uc003bwm.2_5end | |||
|cluster_id=chr3:12045814..12045834,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SYN2_5end | |||
|id=chr3:12045814..12045834,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.25e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.50e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.46e-15;82!UBERON:0009117;4.56e-07;10!UBERON:0005564;4.56e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;5.37e-40;32!UBERON:0001893;1.17e-38;34!UBERON:0003528;1.74e-38;34!UBERON:0002020;1.74e-38;34!UBERON:0002619;5.14e-38;22!UBERON:0002791;2.32e-37;32!UBERON:0002780;2.34e-37;41!UBERON:0001890;2.34e-37;41!UBERON:0000073;7.08e-37;53!UBERON:0002616;7.08e-37;53!UBERON:0001950;1.85e-34;20!UBERON:0000956;9.93e-33;25!UBERON:0000203;9.93e-33;25!UBERON:0001017;5.76e-26;75!UBERON:0000955;1.47e-25;68!UBERON:0001016;1.33e-22;83!UBERON:0002420;8.30e-14;9!UBERON:0007245;8.30e-14;9!UBERON:0010009;8.30e-14;9!UBERON:0010011;8.30e-14;9!UBERON:0000454;8.30e-14;9!UBERON:0004733;1.23e-13;12!UBERON:0002028;1.23e-13;12!UBERON:0000125;2.52e-13;9!UBERON:0002308;2.52e-13;9!UBERON:0007023;4.96e-13;114!UBERON:0004732;2.15e-12;13!UBERON:0000200;2.69e-12;6!UBERON:0002298;5.86e-11;6!UBERON:0000349;1.18e-10;5!UBERON:0001871;2.05e-10;6!UBERON:0011216;2.70e-10;132!UBERON:0000922;2.76e-10;49!UBERON:0002021;2.88e-10;5!UBERON:0009663;3.64e-10;7!UBERON:0001872;3.73e-10;5!UBERON:0002680;2.44e-09;9!UBERON:0001895;2.44e-09;9!UBERON:0000369;7.43e-09;4!UBERON:0002435;7.43e-09;4!UBERON:0000204;7.43e-09;4!UBERON:0001894;1.61e-08;7!UBERON:0005383;4.09e-07;3!UBERON:0005382;4.09e-07;3!UBERON:0001870;6.59e-07;3!UBERON:0000473;6.60e-07;8 | |||
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| ||
|short_description=p2@SYN2 | |||
}} | }} |
Latest revision as of 22:20, 19 September 2015
Short description: | p2@SYN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -27bp_to_ENST00000540660, NM_003178, NM_133625, uc003bwl.1, uc003bwm.2_5end |
EntrezGene: | SYN2 |
HGNC: | 11495 |
UniProt: | F5H7H8Q86VA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.50e-07 | 5 |