FFCP PHASE1:Hg19::chr14:39644395..39644417,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5411 | |EntrezGene=5411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9162 | |HGNC=9162 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H307 | |UniProt=Q9H307 | ||
|association_with_transcript=0bp_to_ENST00000216832_5end | |association_with_transcript=0bp_to_ENST00000216832_5end | ||
|cluster_id=chr14:39644395..39644417,+ | |||
|coexpression_cluster_id=C1724 | |||
|description=CAGE_peak_2_at_PNN_5end | |description=CAGE_peak_2_at_PNN_5end | ||
|id=chr14:39644395..39644417,+ | |id=chr14:39644395..39644417,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.99e-32!172;CL:0000566!2.99e-32!172;CL:0002032!4.33e-30!165;CL:0000837!4.33e-30!165;CL:0000988!8.38e-28!182;CL:0000738!5.12e-21!140;CL:0000763!1.57e-20!112;CL:0000049!1.57e-20!112;CL:0002031!4.34e-17!124;CL:0002087!3.89e-16!119;CL:0000860!6.17e-11!45;CL:0000766!1.44e-10!76;CL:0002057!1.02e-09!42;CL:0000557!1.40e-09!71;CL:0000542!6.15e-09!53;CL:0000051!6.15e-09!53;CL:0000839!1.20e-08!70;CL:0000838!1.25e-08!52;CL:0002009!1.31e-07!65;CL:0002194!3.83e-07!63;CL:0000576!3.83e-07!63;CL:0000040!3.83e-07!63;CL:0000559!3.83e-07!63 | |ontology_enrichment_celltype=CL:0000037!2.99e-32!172;CL:0000566!2.99e-32!172;CL:0002032!4.33e-30!165;CL:0000837!4.33e-30!165;CL:0000988!8.38e-28!182;CL:0000738!5.12e-21!140;CL:0000763!1.57e-20!112;CL:0000049!1.57e-20!112;CL:0002031!4.34e-17!124;CL:0002087!3.89e-16!119;CL:0000860!6.17e-11!45;CL:0000766!1.44e-10!76;CL:0002057!1.02e-09!42;CL:0000557!1.40e-09!71;CL:0000542!6.15e-09!53;CL:0000051!6.15e-09!53;CL:0000839!1.20e-08!70;CL:0000838!1.25e-08!52;CL:0002009!1.31e-07!65;CL:0002194!3.83e-07!63;CL:0000576!3.83e-07!63;CL:0000040!3.83e-07!63;CL:0000559!3.83e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000763;5.77e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.80e-31,168;CL:0002032,3.85e-29,161;CL:0000837,3.85e-29,161;CL:0000988,1.61e-27,177;CL:0000738,3.67e-20,136;CL:0000763,1.09e-19,108;CL:0000049,1.09e-19,108;CL:0002031,2.80e-16,120;CL:0002087,2.44e-15,115;CL:0000766,7.82e-10,72;CL:0000860,1.02e-09,42;CL:0002057,1.02e-09,42;CL:0000542,6.15e-09,53;CL:0000051,6.15e-09,53;CL:0000557,7.41e-09,67;CL:0000838,1.25e-08,52;CL:0000839,6.10e-08,66;CL:0000473,2.35e-07,48;CL:0000234,2.35e-07,48;CL:0002009,6.36e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.83e-07;42 | |||
|ontology_enrichment_disease=DOID:162!4.08e-22!235;DOID:14566!7.80e-21!239;DOID:2531!1.90e-14!51;DOID:0060083!1.90e-14!51;DOID:1240!2.43e-14!39;DOID:0050686!1.38e-12!137;DOID:8692!3.43e-12!31;DOID:0050687!4.55e-12!143;DOID:305!1.17e-09!106 | |ontology_enrichment_disease=DOID:162!4.08e-22!235;DOID:14566!7.80e-21!239;DOID:2531!1.90e-14!51;DOID:0060083!1.90e-14!51;DOID:1240!2.43e-14!39;DOID:0050686!1.38e-12!137;DOID:8692!3.43e-12!31;DOID:0050687!4.55e-12!143;DOID:305!1.17e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:8692;7.95e-12;31!DOID:1240;2.86e-11;39!DOID:2531;1.61e-09;51!DOID:0060083;1.61e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.09e-22,235;DOID:14566,7.83e-21,239;DOID:2531,1.90e-14,51;DOID:0060083,1.90e-14,51;DOID:1240,2.43e-14,39;DOID:0050686,1.39e-12,137;DOID:8692,3.43e-12,31;DOID:0050687,4.57e-12,143;DOID:305,1.18e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-08!102;UBERON:0003061!1.12e-08!102;UBERON:0001474!2.73e-07!86;UBERON:0002371!8.15e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!1.12e-08!102;UBERON:0003061!1.12e-08!102;UBERON:0001474!2.73e-07!86;UBERON:0002371!8.15e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.16e-08,98;UBERON:0003061,5.16e-08,98 | |||
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| ||
|short_description=p2@PNN | |short_description=p2@PNN | ||
}} | }} |
Latest revision as of 00:04, 20 September 2015
Short description: | p2@PNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PNN_5end |
Coexpression cluster: | C1724_Mast_medulloblastoma_small_non_cerebellum_hepatoblastoma_merkel |
Association with transcript: | 0bp_to_ENST00000216832_5end |
EntrezGene: | PNN |
HGNC: | 9162 |
UniProt: | Q9H307 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.80e-31 | 168 |
hematopoietic oligopotent progenitor cell | 3.85e-29 | 161 |
hematopoietic multipotent progenitor cell | 3.85e-29 | 161 |
hematopoietic cell | 1.61e-27 | 177 |
leukocyte | 3.67e-20 | 136 |
myeloid cell | 1.09e-19 | 108 |
common myeloid progenitor | 1.09e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 2.80e-16 | 120 |
nongranular leukocyte | 2.44e-15 | 115 |
myeloid leukocyte | 7.82e-10 | 72 |
classical monocyte | 1.02e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-09 | 42 |
lymphocyte | 6.15e-09 | 53 |
common lymphoid progenitor | 6.15e-09 | 53 |
granulocyte monocyte progenitor cell | 7.41e-09 | 67 |
lymphoid lineage restricted progenitor cell | 1.25e-08 | 52 |
myeloid lineage restricted progenitor cell | 6.10e-08 | 66 |
defensive cell | 2.35e-07 | 48 |
phagocyte | 2.35e-07 | 48 |
macrophage dendritic cell progenitor | 6.36e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.16e-08 | 98 |
blood island | 5.16e-08 | 98 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.09e-22 | 235 |
disease of cellular proliferation | 7.83e-21 | 239 |
hematologic cancer | 1.90e-14 | 51 |
immune system cancer | 1.90e-14 | 51 |
leukemia | 2.43e-14 | 39 |
organ system cancer | 1.39e-12 | 137 |
myeloid leukemia | 3.43e-12 | 31 |
cell type cancer | 4.57e-12 | 143 |
carcinoma | 1.18e-09 | 106 |