FFCP PHASE1:Hg19::chr10:94449675..94449694,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:94449675..94449694,+ to FFCP PHASE1:Hg19::chr10:94449675..94449694,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3087 | |EntrezGene=3087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4901 | |HGNC=4901 | ||
|TSSclassifier=strong | |||
|UniProt=B1AQ17,Q03014 | |UniProt=B1AQ17,Q03014 | ||
|association_with_transcript=0bp_to_NM_002729,uc001kid.2_5end | |||
|cluster_id=chr10:94449675..94449694,+ | |||
|coexpression_cluster_id=C3059 | |||
|description=CAGE_peak_2_at_HHEX_5end | |||
|id=chr10:94449675..94449694,+ | |||
|ontology_enrichment_celltype=CL:0000763!8.62e-26!112;CL:0000049!8.62e-26!112;CL:0000037!1.36e-20!172;CL:0000566!1.36e-20!172;CL:0000988!3.84e-19!182;CL:0002032!6.76e-19!165;CL:0000837!6.76e-19!165;CL:0000115!3.44e-15!35;CL:0000766!5.26e-14!76;CL:0002139!1.30e-12!24;CL:0000557!6.36e-12!71;CL:0002078!9.34e-12!44;CL:0000839!8.85e-11!70;CL:0002009!2.27e-10!65;CL:0000071!3.28e-10!18;CL:0002546!3.28e-10!18;CL:0002194!5.30e-10!63;CL:0000576!5.30e-10!63;CL:0000040!5.30e-10!63;CL:0000559!5.30e-10!63;CL:0000738!7.36e-10!140;CL:0000236!6.69e-09!14;CL:0002031!4.66e-07!124;CL:0002087!7.07e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000115;9.22e-14;36!CL:0002139;2.26e-13;24!CL:0000071;9.40e-11;18!CL:0000236;2.04e-09;13!CL:0000763;3.99e-09;100!CL:0002078;1.28e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.79e-26,108;CL:0000049,9.79e-26,108;CL:0000037,3.42e-20,168;CL:0002032,2.59e-18,161;CL:0000837,2.59e-18,161;CL:0000988,1.12e-17,177;CL:0000115,3.20e-16,36;CL:0000766,3.62e-14,72;CL:0002139,2.66e-13,24;CL:0000557,5.81e-12,67;CL:0002078,6.29e-12,45;CL:0000071,9.48e-11,18;CL:0002546,9.48e-11,18;CL:0002009,1.38e-10,61;CL:0000839,1.59e-10,66;CL:0002194,3.40e-10,59;CL:0000576,3.40e-10,59;CL:0000040,3.40e-10,59;CL:0000559,3.40e-10,59;CL:0000236,2.33e-09,14;CL:0000738,2.39e-09,136;CL:0000473,5.21e-08,48;CL:0000234,5.21e-08,48 | |||
|ontology_enrichment_development_v019=CL:0002546;9.40e-11;18!CL:0000049;1.94e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.06e-15!31;DOID:1240!1.72e-11!39;DOID:2531!1.25e-08!51;DOID:0060083!1.25e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.58e-16;31!DOID:1240;5.92e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.39e-16,31;DOID:1240,4.95e-12,39;DOID:2531,3.02e-09,51;DOID:0060083,3.02e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0003081!6.65e-20!216;UBERON:0003914!1.55e-15!118;UBERON:0001009!2.05e-15!113;UBERON:0004535!3.08e-15!110;UBERON:0000055!1.06e-14!69;UBERON:0001981!7.91e-14!60;UBERON:0007500!7.91e-14!60;UBERON:0004537!7.91e-14!60;UBERON:0006965!7.91e-14!60;UBERON:0002405!1.17e-13!115;UBERON:0002049!2.78e-13!79;UBERON:0007798!2.78e-13!79;UBERON:0002193!4.07e-13!112;UBERON:0004872!3.23e-12!84;UBERON:0002390!7.20e-11!102;UBERON:0003061!7.20e-11!102;UBERON:0001986!3.28e-10!18;UBERON:0004638!3.28e-10!18;UBERON:0004852!3.28e-10!18;UBERON:0001474!1.69e-09!86;UBERON:0002371!1.71e-09!80;UBERON:0000487!1.91e-09!22;UBERON:0000490!5.76e-09!138;UBERON:0000025!7.21e-09!194;UBERON:0001637!9.37e-09!42;UBERON:0003509!9.37e-09!42;UBERON:0004572!9.37e-09!42;UBERON:0004111!5.68e-08!241;UBERON:0006914!2.74e-07!25;UBERON:0000477!4.03e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.40e-11;18!UBERON:0001986;9.40e-11;18!UBERON:0004852;9.40e-11;18!UBERON:0000487;1.19e-09;22!UBERON:0000055;2.89e-08;65!UBERON:0007500;1.99e-07;56!UBERON:0001981;1.99e-07;56!UBERON:0004537;1.99e-07;56!UBERON:0006914;3.52e-07;25!UBERON:0001637;3.74e-07;42!UBERON:0003509;3.74e-07;42!UBERON:0004572;3.74e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.48e-21,203;UBERON:0003914,1.41e-15,117;UBERON:0000055,1.58e-15,68;UBERON:0001009,9.02e-15,112;UBERON:0004535,1.41e-14,109;UBERON:0007500,2.80e-14,59;UBERON:0001981,2.80e-14,59;UBERON:0004537,2.80e-14,59;UBERON:0006965,2.80e-14,59;UBERON:0002049,2.56e-13,78;UBERON:0007798,2.56e-13,78;UBERON:0002193,3.37e-13,108;UBERON:0004872,1.23e-12,83;UBERON:0002405,2.02e-11,93;UBERON:0004638,9.48e-11,18;UBERON:0001986,9.48e-11,18;UBERON:0004852,9.48e-11,18;UBERON:0002390,9.95e-11,98;UBERON:0003061,9.95e-11,98;UBERON:0002371,1.00e-09,76;UBERON:0001474,1.02e-09,82;UBERON:0000487,1.29e-09,22;UBERON:0001637,4.65e-09,42;UBERON:0003509,4.65e-09,42;UBERON:0004572,4.65e-09,42;UBERON:0000926,7.33e-08,315;UBERON:0004120,7.33e-08,315;UBERON:0006603,7.33e-08,315;UBERON:0000025,2.50e-07,192;UBERON:0006914,3.70e-07,25;UBERON:0004765,4.92e-07,90 | |||
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| ||
|short_description=p2@HHEX | |||
}} | }} |
Latest revision as of 00:53, 20 September 2015
Short description: | p2@HHEX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HHEX_5end |
Coexpression cluster: | C3059_thyroid_Renal_Smooth_Hepatic_acute_CD34_Endothelial |
Association with transcript: | 0bp_to_NM_002729, uc001kid.2_5end |
EntrezGene: | HHEX |
HGNC: | 4901 |
UniProt: | B1AQ17Q03014 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.79e-26 | 108 |
common myeloid progenitor | 9.79e-26 | 108 |
hematopoietic stem cell | 3.42e-20 | 168 |
hematopoietic oligopotent progenitor cell | 2.59e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.59e-18 | 161 |
hematopoietic cell | 1.12e-17 | 177 |
endothelial cell | 3.20e-16 | 36 |
myeloid leukocyte | 3.62e-14 | 72 |
endothelial cell of vascular tree | 2.66e-13 | 24 |
granulocyte monocyte progenitor cell | 5.81e-12 | 67 |
meso-epithelial cell | 6.29e-12 | 45 |
blood vessel endothelial cell | 9.48e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.48e-11 | 18 |
macrophage dendritic cell progenitor | 1.38e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.59e-10 | 66 |
monopoietic cell | 3.40e-10 | 59 |
monocyte | 3.40e-10 | 59 |
monoblast | 3.40e-10 | 59 |
promonocyte | 3.40e-10 | 59 |
B cell | 2.33e-09 | 14 |
leukocyte | 2.39e-09 | 136 |
defensive cell | 5.21e-08 | 48 |
phagocyte | 5.21e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.48e-21 | 203 |
epithelial tube | 1.41e-15 | 117 |
vessel | 1.58e-15 | 68 |
circulatory system | 9.02e-15 | 112 |
cardiovascular system | 1.41e-14 | 109 |
epithelial tube open at both ends | 2.80e-14 | 59 |
blood vessel | 2.80e-14 | 59 |
blood vasculature | 2.80e-14 | 59 |
vascular cord | 2.80e-14 | 59 |
vasculature | 2.56e-13 | 78 |
vascular system | 2.56e-13 | 78 |
hemolymphoid system | 3.37e-13 | 108 |
splanchnic layer of lateral plate mesoderm | 1.23e-12 | 83 |
immune system | 2.02e-11 | 93 |
blood vessel endothelium | 9.48e-11 | 18 |
endothelium | 9.48e-11 | 18 |
cardiovascular system endothelium | 9.48e-11 | 18 |
hematopoietic system | 9.95e-11 | 98 |
blood island | 9.95e-11 | 98 |
bone marrow | 1.00e-09 | 76 |
bone element | 1.02e-09 | 82 |
simple squamous epithelium | 1.29e-09 | 22 |
artery | 4.65e-09 | 42 |
arterial blood vessel | 4.65e-09 | 42 |
arterial system | 4.65e-09 | 42 |
mesoderm | 7.33e-08 | 315 |
mesoderm-derived structure | 7.33e-08 | 315 |
presumptive mesoderm | 7.33e-08 | 315 |
tube | 2.50e-07 | 192 |
squamous epithelium | 3.70e-07 | 25 |
skeletal element | 4.92e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.39e-16 | 31 |
leukemia | 4.95e-12 | 39 |
hematologic cancer | 3.02e-09 | 51 |
immune system cancer | 3.02e-09 | 51 |