FFCP PHASE1:Hg19::chr12:6740777..6740788,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6740777..6740788,-
|short_description=p7@LPAR5
|description=CAGE_peak_7_at_LPAR5_5end
|association_with_transcript=26bp_to_ENST00000431922,NM_001142961,uc...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57121 | |EntrezGene=57121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13307 | |HGNC=13307 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H1C0,Q5KU18 | |UniProt=Q9H1C0,Q5KU18 | ||
|association_with_transcript=26bp_to_ENST00000431922,NM_001142961,uc009zer.2_5end | |||
|cluster_id=chr12:6740777..6740788,- | |||
|description=CAGE_peak_7_at_LPAR5_5end | |||
|id=chr12:6740777..6740788,- | |||
|ontology_enrichment_celltype=CL:0002274!6.33e-09!5;CL:0000457!6.33e-09!5;CL:0002191!6.33e-09!5;CL:0000097!6.33e-09!5;CL:0000831!6.33e-09!5;CL:0002028!6.33e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000817;8.72e-18;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.97e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.98e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.20e-33!115;UBERON:0001049!1.04e-25!57;UBERON:0005068!1.04e-25!57;UBERON:0006241!1.04e-25!57;UBERON:0007135!1.04e-25!57;UBERON:0002780!6.94e-22!41;UBERON:0001890!6.94e-22!41;UBERON:0006240!6.94e-22!41;UBERON:0003080!3.48e-21!42;UBERON:0002616!1.02e-19!59;UBERON:0001893!3.22e-19!34;UBERON:0002791!6.05e-18!33;UBERON:0002020!5.72e-17!34;UBERON:0003528!5.72e-17!34;UBERON:0001869!9.88e-17!32;UBERON:0000955!1.49e-16!69;UBERON:0006238!1.49e-16!69;UBERON:0001017!9.16e-16!82;UBERON:0003075!6.57e-15!86;UBERON:0007284!6.57e-15!86;UBERON:0005743!1.39e-14!86;UBERON:0002346!8.24e-14!90;UBERON:0000073!2.60e-12!94;UBERON:0001016!2.60e-12!94;UBERON:0003056!2.73e-12!61;UBERON:0002619!4.15e-12!22;UBERON:0001950!1.69e-11!20;UBERON:0000956!2.85e-10!25;UBERON:0000203!2.85e-10!25;UBERON:0002420!3.27e-09!9;UBERON:0007245!3.27e-09!9;UBERON:0010009!3.27e-09!9;UBERON:0010011!3.27e-09!9;UBERON:0000454!3.27e-09!9;UBERON:0002308!7.23e-09!9;UBERON:0000125!7.23e-09!9;UBERON:0009663!7.62e-09!7;UBERON:0000153!8.89e-08!129;UBERON:0007811!8.89e-08!129;UBERON:0000033!2.04e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;8.72e-18;1!UBERON:0011215;8.72e-18;1!UBERON:0001018;8.72e-18;1!UBERON:0002473;8.72e-18;1!UBERON:0005340;8.72e-18;1!UBERON:0003544;8.72e-18;1!UBERON:0005970;8.72e-18;1!UBERON:0002316;8.72e-18;1!UBERON:0001020;8.72e-18;1!UBERON:0002437;8.72e-18;1!UBERON:0001876;1.44e-09;2!UBERON:0005162;1.44e-09;2!UBERON:0000122;1.44e-09;2!UBERON:0000160;5.52e-09;17!UBERON:0001155;2.33e-08;9!UBERON:0005409;3.79e-07;22!UBERON:0000059;5.39e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,5.26e-18,1;UBERON:0011215,5.26e-18,1;UBERON:0001018,5.26e-18,1;UBERON:0002473,5.26e-18,1;UBERON:0005340,5.26e-18,1;UBERON:0003544,5.26e-18,1;UBERON:0005970,5.26e-18,1;UBERON:0002316,5.26e-18,1;UBERON:0001020,5.26e-18,1;UBERON:0002437,5.26e-18,1;UBERON:0005162,1.12e-09,2;UBERON:0000122,1.12e-09,2;UBERON:0001876,1.86e-09,2;UBERON:0000160,4.95e-09,17;UBERON:0001155,2.05e-08,9;UBERON:0000059,4.85e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.57470412614962,0.393553906568396,0,0.383829398097213,0,0,0,0,0,0,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.445641827540694,0,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0.579606171470105,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0.255973222308837,1.24930726552346,0,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,1.14462964217194,0.414656231081544,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0,0,1.00988449083511,0.0711418433484141,0,0,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.556812347790485,0,0,0,1.4098700508785,1.49712432326576,0.146508179271894,0,0.111443384277478,0,0,0,0,0,1.1253553312841,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,1.85760885457012,2.4441205797345,0,0,0,1.61762719153625,0.802577647298789,0.702793337176017,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0.916641696046735,0,0.998395002494955,3.004582336956,1.56220020209311,0.268733889946905,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.789744236554321,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0.500763722825999,0,0.887432412294818,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.319267718114302,0.41023272848151,0.504143392443436,0.553258019713743,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0,0,0.443910671357348,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.79832133146375,0,0,0.40781839786099,0.591954962065642,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0.452888530700021,2.85544384999395,0.874238242015829,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0.0939839179798536,0.45120521581504,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.271965960763659,0.872701380680755,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930896962757057,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0.342233301085281,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.57470412614962,0.393553906568396,0,0.383829398097213,0,0,0,0,0,0,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.445641827540694,0,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0.579606171470105,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0.255973222308837,1.24930726552346,0,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,1.14462964217194,0.414656231081544,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0,0,1.00988449083511,0.0711418433484141,0,0,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.556812347790485,0,0,0,1.4098700508785,1.49712432326576,0.146508179271894,0,0.111443384277478,0,0,0,0,0,1.1253553312841,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,1.85760885457012,2.4441205797345,0,0,0,1.61762719153625,0.802577647298789,0.702793337176017,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0.916641696046735,0,0.998395002494955,3.004582336956,1.56220020209311,0.268733889946905,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.789744236554321,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0.500763722825999,0,0.887432412294818,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.319267718114302,0.41023272848151,0.504143392443436,0.553258019713743,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0,0,0.443910671357348,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.79832133146375,0,0,0.40781839786099,0.591954962065642,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0.452888530700021,2.85544384999395,0.874238242015829,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0.0939839179798536,0.45120521581504,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.271965960763659,0.872701380680755,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930896962757057,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0.342233301085281,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.641136984606466 | ||
|short_description=p7@LPAR5 | |||
}} | }} |
Latest revision as of 00:58, 20 September 2015
Short description: | p7@LPAR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LPAR5_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000431922, NM_001142961, uc009zer.2_5end |
EntrezGene: | LPAR5 |
HGNC: | 13307 |
UniProt: | Q9H1C0Q5KU18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 5.26e-18 | 1 |
central nervous system cell part cluster | 5.26e-18 | 1 |
axon tract | 5.26e-18 | 1 |
intercerebral commissure | 5.26e-18 | 1 |
dorsal telencephalic commissure | 5.26e-18 | 1 |
brain white matter | 5.26e-18 | 1 |
brain commissure | 5.26e-18 | 1 |
white matter | 5.26e-18 | 1 |
nervous system commissure | 5.26e-18 | 1 |
cerebral hemisphere white matter | 5.26e-18 | 1 |
multi cell component structure | 1.12e-09 | 2 |
neuron projection bundle | 1.12e-09 | 2 |
amygdala | 1.86e-09 | 2 |
intestine | 4.95e-09 | 17 |
colon | 2.05e-08 | 9 |
large intestine | 4.85e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.98e-10 | 2 |