FFCP PHASE1:Hg19::chr12:6809543..6809596,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196500 | |EntrezGene=196500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25338 | |HGNC=25338 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0T3,Q8IYJ0 | |UniProt=A8K0T3,Q8IYJ0 | ||
|association_with_transcript=0bp_to_ENST00000540656,NM_001244015_5end | |association_with_transcript=0bp_to_ENST00000540656,NM_001244015_5end | ||
|cluster_id=chr12:6809543..6809596,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_4_at_C12orf53_5end | |description=CAGE_peak_4_at_C12orf53_5end | ||
|id=chr12:6809543..6809596,- | |id=chr12:6809543..6809596,- | ||
|ontology_enrichment_celltype=CL:0000055!3.30e-12!180;CL:0000393!2.15e-11!60;CL:0000211!2.15e-11!60;CL:0000187!3.83e-10!54;CL:0000183!1.39e-09!59;CL:0002319!1.41e-09!25;CL:0000680!1.61e-09!57;CL:0000056!1.61e-09!57;CL:0000355!1.61e-09!57;CL:0000192!1.98e-08!42;CL:0000514!1.98e-08!42;CL:0000095!4.59e-07!17;CL:0000123!4.59e-07!17 | |ontology_enrichment_celltype=CL:0000055!3.30e-12!180;CL:0000393!2.15e-11!60;CL:0000211!2.15e-11!60;CL:0000187!3.83e-10!54;CL:0000183!1.39e-09!59;CL:0002319!1.41e-09!25;CL:0000680!1.61e-09!57;CL:0000056!1.61e-09!57;CL:0000355!1.61e-09!57;CL:0000192!1.98e-08!42;CL:0000514!1.98e-08!42;CL:0000095!4.59e-07!17;CL:0000123!4.59e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.23e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.20e-10,32;CL:0000192,1.36e-07,43;CL:0000514,1.36e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.99e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.80e-36!86;UBERON:0000073!5.44e-36!94;UBERON:0001016!5.44e-36!94;UBERON:0001017!3.47e-35!82;UBERON:0002346!1.62e-32!90;UBERON:0003075!1.68e-32!86;UBERON:0007284!1.68e-32!86;UBERON:0000955!5.64e-31!69;UBERON:0006238!5.64e-31!69;UBERON:0001049!6.92e-31!57;UBERON:0005068!6.92e-31!57;UBERON:0006241!6.92e-31!57;UBERON:0007135!6.92e-31!57;UBERON:0002780!3.14e-27!41;UBERON:0001890!3.14e-27!41;UBERON:0006240!3.14e-27!41;UBERON:0002616!3.63e-27!59;UBERON:0003056!8.37e-27!61;UBERON:0003080!3.71e-26!42;UBERON:0001869!2.06e-23!32;UBERON:0002020!4.95e-23!34;UBERON:0003528!4.95e-23!34;UBERON:0000033!8.07e-23!123;UBERON:0001893!1.31e-22!34;UBERON:0000924!9.19e-22!173;UBERON:0006601!9.19e-22!173;UBERON:0002791!9.46e-22!33;UBERON:0004121!2.36e-21!169;UBERON:0000153!5.71e-21!129;UBERON:0007811!5.71e-21!129;UBERON:0007023!1.70e-20!115;UBERON:0000956!8.28e-18!25;UBERON:0000203!8.28e-18!25;UBERON:0000025!1.02e-17!194;UBERON:0000475!1.16e-16!365;UBERON:0002619!2.81e-16!22;UBERON:0000119!3.08e-16!312;UBERON:0000483!5.01e-16!309;UBERON:0000481!5.16e-16!347;UBERON:0001950!5.81e-15!20;UBERON:0004111!4.71e-13!241;UBERON:0000477!4.72e-12!286;UBERON:0000922!1.13e-11!612;UBERON:0000468!4.14e-11!659;UBERON:0000467!8.78e-10!625;UBERON:0000480!1.16e-09!626;UBERON:0002050!1.53e-09!605;UBERON:0005423!1.53e-09!605;UBERON:0002385!2.83e-09!63;UBERON:0001015!2.83e-09!63;UBERON:0000383!2.83e-09!63;UBERON:0000923!3.30e-09!604;UBERON:0005291!3.30e-09!604;UBERON:0006598!3.30e-09!604;UBERON:0002532!3.30e-09!604;UBERON:0001134!6.27e-09!61;UBERON:0002036!6.27e-09!61;UBERON:0003082!6.27e-09!61;UBERON:0000064!3.03e-08!219;UBERON:0000914!3.88e-08!83;UBERON:0002329!3.88e-08!83;UBERON:0003077!3.88e-08!83;UBERON:0003059!3.88e-08!83;UBERON:0007282!3.88e-08!83;UBERON:0009618!3.88e-08!83;UBERON:0007285!3.88e-08!83;UBERON:0004290!1.10e-07!70;UBERON:0000200!5.50e-07!6;UBERON:0001637!5.52e-07!42;UBERON:0003509!5.52e-07!42;UBERON:0004572!5.52e-07!42;UBERON:0000486!7.87e-07!82 | |ontology_enrichment_uberon=UBERON:0005743!2.80e-36!86;UBERON:0000073!5.44e-36!94;UBERON:0001016!5.44e-36!94;UBERON:0001017!3.47e-35!82;UBERON:0002346!1.62e-32!90;UBERON:0003075!1.68e-32!86;UBERON:0007284!1.68e-32!86;UBERON:0000955!5.64e-31!69;UBERON:0006238!5.64e-31!69;UBERON:0001049!6.92e-31!57;UBERON:0005068!6.92e-31!57;UBERON:0006241!6.92e-31!57;UBERON:0007135!6.92e-31!57;UBERON:0002780!3.14e-27!41;UBERON:0001890!3.14e-27!41;UBERON:0006240!3.14e-27!41;UBERON:0002616!3.63e-27!59;UBERON:0003056!8.37e-27!61;UBERON:0003080!3.71e-26!42;UBERON:0001869!2.06e-23!32;UBERON:0002020!4.95e-23!34;UBERON:0003528!4.95e-23!34;UBERON:0000033!8.07e-23!123;UBERON:0001893!1.31e-22!34;UBERON:0000924!9.19e-22!173;UBERON:0006601!9.19e-22!173;UBERON:0002791!9.46e-22!33;UBERON:0004121!2.36e-21!169;UBERON:0000153!5.71e-21!129;UBERON:0007811!5.71e-21!129;UBERON:0007023!1.70e-20!115;UBERON:0000956!8.28e-18!25;UBERON:0000203!8.28e-18!25;UBERON:0000025!1.02e-17!194;UBERON:0000475!1.16e-16!365;UBERON:0002619!2.81e-16!22;UBERON:0000119!3.08e-16!312;UBERON:0000483!5.01e-16!309;UBERON:0000481!5.16e-16!347;UBERON:0001950!5.81e-15!20;UBERON:0004111!4.71e-13!241;UBERON:0000477!4.72e-12!286;UBERON:0000922!1.13e-11!612;UBERON:0000468!4.14e-11!659;UBERON:0000467!8.78e-10!625;UBERON:0000480!1.16e-09!626;UBERON:0002050!1.53e-09!605;UBERON:0005423!1.53e-09!605;UBERON:0002385!2.83e-09!63;UBERON:0001015!2.83e-09!63;UBERON:0000383!2.83e-09!63;UBERON:0000923!3.30e-09!604;UBERON:0005291!3.30e-09!604;UBERON:0006598!3.30e-09!604;UBERON:0002532!3.30e-09!604;UBERON:0001134!6.27e-09!61;UBERON:0002036!6.27e-09!61;UBERON:0003082!6.27e-09!61;UBERON:0000064!3.03e-08!219;UBERON:0000914!3.88e-08!83;UBERON:0002329!3.88e-08!83;UBERON:0003077!3.88e-08!83;UBERON:0003059!3.88e-08!83;UBERON:0007282!3.88e-08!83;UBERON:0009618!3.88e-08!83;UBERON:0007285!3.88e-08!83;UBERON:0004290!1.10e-07!70;UBERON:0000200!5.50e-07!6;UBERON:0001637!5.52e-07!42;UBERON:0003509!5.52e-07!42;UBERON:0004572!5.52e-07!42;UBERON:0000486!7.87e-07!82 | ||
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| ||
|short_description=p4@C12orf53 | |short_description=p4@C12orf53 | ||
}} | }} |
Latest revision as of 01:46, 20 September 2015
Short description: | p4@C12orf53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C12orf53_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000540656, NM_001244015_5end |
EntrezGene: | C12orf53 |
HGNC: | 25338 |
UniProt: | A8K0T3Q8IYJ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.20e-10 | 32 |
smooth muscle cell | 1.36e-07 | 43 |
smooth muscle myoblast | 1.36e-07 | 43 |