FFCP PHASE1:Hg19::chr3:124356004..124356062,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8997 | |EntrezGene=8997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4814 | |HGNC=4814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011bjz.1_5end | |association_with_transcript=0bp_to_uc011bjz.1_5end | ||
|cluster_id=chr3:124356004..124356062,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_7_at_KALRN_5end | |description=CAGE_peak_7_at_KALRN_5end | ||
|id=chr3:124356004..124356062,+ | |id=chr3:124356004..124356062,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.20e-08!12;CL:0000417!2.20e-08!12;CL:0000668!2.20e-08!12;CL:0000414!2.20e-08!12;CL:0000412!2.20e-08!12;CL:0000182!2.20e-08!12 | |ontology_enrichment_celltype=CL:0000181!2.20e-08!12;CL:0000417!2.20e-08!12;CL:0000668!2.20e-08!12;CL:0000414!2.20e-08!12;CL:0000412!2.20e-08!12;CL:0000182!2.20e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002563;8.05e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.89e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.26e-09;1!UBERON:0001045;1.84e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.03e-16!35;UBERON:0000160!6.54e-14!27;UBERON:0000059!1.80e-13!11;UBERON:0004921!6.18e-12!129;UBERON:0004185!6.18e-12!129;UBERON:0001007!1.50e-10!155;UBERON:0001555!1.50e-10!155;UBERON:0007026!1.50e-10!155;UBERON:0004907!2.85e-10!5;UBERON:0004119!4.63e-09!169;UBERON:0000925!4.63e-09!169;UBERON:0006595!4.63e-09!169;UBERON:0001155!6.26e-09!9;UBERON:0009854!6.85e-09!23;UBERON:0003929!9.56e-09!54;UBERON:0009497!4.61e-08!25;UBERON:0000015!4.61e-08!25;UBERON:0002423!4.61e-08!25;UBERON:0006235!4.61e-08!25;UBERON:0004161!4.61e-08!25;UBERON:0009856!1.14e-07!26;UBERON:0001052!1.59e-07!4;UBERON:0005057!1.89e-07!26;UBERON:0008835!2.58e-07!22;UBERON:0003894!2.58e-07!22;UBERON:0002107!8.87e-07!19;UBERON:0006925!8.87e-07!19;UBERON:0008836!8.87e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;9.36e-49;22!UBERON:0000160;1.02e-43;17!UBERON:0004921;1.55e-29;33!UBERON:0000059;3.62e-26;11!UBERON:0001155;1.69e-22;9!UBERON:0002108;1.29e-15;4!UBERON:0004907;5.91e-15;5!UBERON:0001555;3.68e-11;54!UBERON:0001007;6.64e-10;81!UBERON:0001154;1.84e-09;1!UBERON:0001153;1.84e-09;1!UBERON:0009854;1.84e-09;1!UBERON:0001052;7.29e-09;4!UBERON:0001242;8.05e-09;4!UBERON:0001262;8.05e-09;4!UBERON:0004786;8.05e-09;4!UBERON:0004808;8.05e-09;4!UBERON:0001277;8.05e-09;4!UBERON:0000945;2.47e-07;5!UBERON:0010039;2.47e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.02e-43,17;UBERON:0005409,6.79e-43,25;UBERON:0000059,3.47e-26,11;UBERON:0001155,1.61e-22,9;UBERON:0002108,1.32e-15,4;UBERON:0004907,5.63e-15,5;UBERON:0004921,1.50e-12,118;UBERON:0001007,2.81e-11,145;UBERON:0001555,2.81e-11,145;UBERON:0007026,2.81e-11,145;UBERON:0004119,5.91e-10,160;UBERON:0000925,5.91e-10,160;UBERON:0006595,5.91e-10,160;UBERON:0001154,1.84e-09,1;UBERON:0001153,1.84e-09,1;UBERON:0001045,1.84e-09,1;UBERON:0001052,7.00e-09,4;UBERON:0001242,7.89e-09,4;UBERON:0001262,7.89e-09,4;UBERON:0004786,7.89e-09,4;UBERON:0004808,7.89e-09,4;UBERON:0001277,7.89e-09,4;UBERON:0001046,6.67e-07,19 | |||
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| ||
|short_description=p7@KALRN | |short_description=p7@KALRN | ||
}} | }} |
Latest revision as of 02:33, 20 September 2015
Short description: | p7@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KALRN_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_uc011bjz.1_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.89e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.02e-43 | 17 |
gastrointestinal system | 6.79e-43 | 25 |
large intestine | 3.47e-26 | 11 |
colon | 1.61e-22 | 9 |
small intestine | 1.32e-15 | 4 |
lower digestive tract | 5.63e-15 | 5 |
subdivision of digestive tract | 1.50e-12 | 118 |
digestive system | 2.81e-11 | 145 |
digestive tract | 2.81e-11 | 145 |
primitive gut | 2.81e-11 | 145 |
endoderm-derived structure | 5.91e-10 | 160 |
endoderm | 5.91e-10 | 160 |
presumptive endoderm | 5.91e-10 | 160 |
vermiform appendix | 1.84e-09 | 1 |
caecum | 1.84e-09 | 1 |
midgut | 1.84e-09 | 1 |
rectum | 7.00e-09 | 4 |
intestinal mucosa | 7.89e-09 | 4 |
wall of intestine | 7.89e-09 | 4 |
gastrointestinal system mucosa | 7.89e-09 | 4 |
gastrointestinal system epithelium | 7.89e-09 | 4 |
intestinal epithelium | 7.89e-09 | 4 |
hindgut | 6.67e-07 | 19 |