FFCP PHASE1:Hg19::chr1:205325698..205325721,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460687_5end | |association_with_transcript=0bp_to_ENST00000460687_5end | ||
|cluster_id=chr1:205325698..205325721,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_5_at_KLHDC8A_5end | |description=CAGE_peak_5_at_KLHDC8A_5end | ||
|id=chr1:205325698..205325721,- | |id=chr1:205325698..205325721,- | ||
|ontology_enrichment_celltype=CL:0000047!9.09e-27!8;CL:0000540!2.96e-18!6;CL:0000031!2.96e-18!6;CL:0000404!2.96e-18!6;CL:0002319!1.13e-14!25;CL:0000133!1.12e-09!59;CL:0002322!1.08e-08!5;CL:0000221!1.21e-07!71 | |ontology_enrichment_celltype=CL:0000047!9.09e-27!8;CL:0000540!2.96e-18!6;CL:0000031!2.96e-18!6;CL:0000404!2.96e-18!6;CL:0002319!1.13e-14!25;CL:0000133!1.12e-09!59;CL:0002322!1.08e-08!5;CL:0000221!1.21e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.26e-31;2!CL:0002319;2.38e-09;25!CL:0000123;6.67e-09;2!CL:0000242;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.88e-18,8;CL:0002319,2.25e-09,25;CL:0000242,5.49e-09,2;CL:0000133,7.99e-09,59;CL:0000221,3.19e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.78e-16;1!UBERON:0009117;4.73e-07;10!UBERON:0005564;4.73e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.55e-15!94;UBERON:0001016!6.55e-15!94;UBERON:0001017!3.60e-14!82;UBERON:0005743!2.49e-13!86;UBERON:0005162!9.82e-10!2;UBERON:0000122!9.82e-10!2;UBERON:0004121!3.65e-08!169;UBERON:0000924!7.27e-08!173;UBERON:0006601!7.27e-08!173;UBERON:0001049!9.16e-07!57;UBERON:0005068!9.16e-07!57;UBERON:0006241!9.16e-07!57;UBERON:0007135!9.16e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.78e-16;1!UBERON:0001785;1.78e-16;1!UBERON:0002464;1.78e-16;1!UBERON:0004904;1.78e-16;1!UBERON:0001021;1.78e-16;1!UBERON:0003714;6.67e-09;2!UBERON:0005162;6.67e-09;2!UBERON:0000122;6.67e-09;2!UBERON:0000010;8.45e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.93e-16,1;UBERON:0001785,1.93e-16,1;UBERON:0002464,1.93e-16,1;UBERON:0004904,1.93e-16,1;UBERON:0001021,1.93e-16,1;UBERON:0003902,1.93e-16,1;UBERON:0005425,1.93e-16,1;UBERON:0003714,6.94e-09,2;UBERON:0005162,6.94e-09,2;UBERON:0000122,6.94e-09,2;UBERON:0000010,8.60e-08,8 | |||
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| ||
|short_description=p5@KLHDC8A | |short_description=p5@KLHDC8A | ||
}} | }} |
Latest revision as of 02:48, 20 September 2015
Short description: | p5@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLHDC8A_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000460687_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.88e-18 | 8 |
neural cell | 2.25e-09 | 25 |
Merkel cell | 5.49e-09 | 2 |
neurectodermal cell | 7.99e-09 | 59 |
ectodermal cell | 3.19e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.93e-16 | 1 |
cranial nerve | 1.93e-16 | 1 |
nerve trunk | 1.93e-16 | 1 |
nerve connecting eye with brain | 1.93e-16 | 1 |
nerve | 1.93e-16 | 1 |
retinal neural layer | 1.93e-16 | 1 |
presumptive neural retina | 1.93e-16 | 1 |
neural tissue | 6.94e-09 | 2 |
multi cell component structure | 6.94e-09 | 2 |
neuron projection bundle | 6.94e-09 | 2 |
peripheral nervous system | 8.60e-08 | 8 |