FFCP PHASE1:Hg19::chr12:69139918..69139974,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:69139918..69139974,+ to FFCP PHASE1:Hg19::chr12:69139918..69139974,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55508 | |EntrezGene=55508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20864 | |HGNC=20864 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z769 | |UniProt=Q7Z769 | ||
|association_with_transcript=0bp_to_NM_018656,uc001suh.2_5end | |||
|cluster_id=chr12:69139918..69139974,+ | |||
|description=CAGE_peak_1_at_SLC35E3_5end | |||
|id=chr12:69139918..69139974,+ | |||
|ontology_enrichment_celltype=CL:0002194!9.37e-07!63;CL:0000576!9.37e-07!63;CL:0000040!9.37e-07!63;CL:0000559!9.37e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.29e-08;39!CL:0000234;1.29e-08;39!CL:0000860;6.56e-08;33!CL:0002057;6.56e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.49e-08,48;CL:0000234,4.49e-08,48;CL:0002194,1.96e-07,59;CL:0000576,1.96e-07,59;CL:0000040,1.96e-07,59;CL:0000559,1.96e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.69e-10!57;UBERON:0005068!3.69e-10!57;UBERON:0006241!3.69e-10!57;UBERON:0007135!3.69e-10!57;UBERON:0002616!7.67e-10!59;UBERON:0000955!4.92e-09!69;UBERON:0006238!4.92e-09!69;UBERON:0001017!1.08e-08!82;UBERON:0000073!1.37e-08!94;UBERON:0001016!1.37e-08!94;UBERON:0002780!1.61e-08!41;UBERON:0001890!1.61e-08!41;UBERON:0006240!1.61e-08!41;UBERON:0005743!2.22e-08!86;UBERON:0001893!8.37e-08!34;UBERON:0003080!9.89e-08!42;UBERON:0002791!2.25e-07!33;UBERON:0002020!3.39e-07!34;UBERON:0003528!3.39e-07!34;UBERON:0001869!5.77e-07!32;UBERON:0000033!7.95e-07!123;UBERON:0000153!9.65e-07!129;UBERON:0007811!9.65e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.27e-07;53!UBERON:0002616;6.27e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.92e-11,56;UBERON:0005068,5.92e-11,56;UBERON:0006241,5.92e-11,56;UBERON:0007135,5.92e-11,56;UBERON:0000073,3.02e-10,53;UBERON:0002616,3.02e-10,53;UBERON:0000955,1.09e-09,68;UBERON:0006238,1.09e-09,68;UBERON:0001016,1.97e-09,89;UBERON:0001017,2.86e-09,81;UBERON:0002780,1.61e-08,41;UBERON:0001890,1.61e-08,41;UBERON:0003080,1.61e-08,41;UBERON:0006240,1.61e-08,41;UBERON:0001893,8.37e-08,34;UBERON:0003528,3.39e-07,34;UBERON:0002020,3.39e-07,34;UBERON:0001869,5.77e-07,32;UBERON:0002791,6.43e-07,32 | |||
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| ||
|short_description=p1@SLC35E3 | |||
}} | }} |
Latest revision as of 03:45, 20 September 2015
Short description: | p1@SLC35E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC35E3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_018656, uc001suh.2_5end |
EntrezGene: | SLC35E3 |
HGNC: | 20864 |
UniProt: | Q7Z769 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.49e-08 | 48 |
phagocyte | 4.49e-08 | 48 |
monopoietic cell | 1.96e-07 | 59 |
monocyte | 1.96e-07 | 59 |
monoblast | 1.96e-07 | 59 |
promonocyte | 1.96e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.92e-11 | 56 |
neural rod | 5.92e-11 | 56 |
future spinal cord | 5.92e-11 | 56 |
neural keel | 5.92e-11 | 56 |
regional part of nervous system | 3.02e-10 | 53 |
regional part of brain | 3.02e-10 | 53 |
brain | 1.09e-09 | 68 |
future brain | 1.09e-09 | 68 |
nervous system | 1.97e-09 | 89 |
central nervous system | 2.86e-09 | 81 |
regional part of forebrain | 1.61e-08 | 41 |
forebrain | 1.61e-08 | 41 |
anterior neural tube | 1.61e-08 | 41 |
future forebrain | 1.61e-08 | 41 |
telencephalon | 8.37e-08 | 34 |
brain grey matter | 3.39e-07 | 34 |
gray matter | 3.39e-07 | 34 |
cerebral hemisphere | 5.77e-07 | 32 |
regional part of telencephalon | 6.43e-07 | 32 |