FFCP PHASE1:Hg19::chr17:39296794..39296798,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81871 | |EntrezGene=81871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18909 | |HGNC=18909 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYQ5,Q9BYR0 | |UniProt=Q9BYQ5,Q9BYR0 | ||
|association_with_transcript=-55bp_to_ENST00000345847,NM_030976_5end | |association_with_transcript=-55bp_to_ENST00000345847,NM_030976_5end | ||
|cluster_id=chr17:39296794..39296798,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRTAP4-6_5end | |description=CAGE_peak_1_at_KRTAP4-6_5end | ||
|id=chr17:39296794..39296798,- | |id=chr17:39296794..39296798,- | ||
|ontology_enrichment_celltype=CL:0002057!9.87e-27!42;CL:0000860!8.10e-25!45;CL:0002194!7.46e-17!63;CL:0000576!7.46e-17!63;CL:0000040!7.46e-17!63;CL:0000559!7.46e-17!63;CL:0002009!2.79e-16!65;CL:0000839!5.43e-15!70;CL:0000557!9.36e-15!71;CL:0000766!1.15e-13!76;CL:0000763!1.16e-08!112;CL:0000049!1.16e-08!112;CL:0002087!4.89e-08!119;CL:0002031!1.23e-07!124 | |ontology_enrichment_celltype=CL:0002057!9.87e-27!42;CL:0000860!8.10e-25!45;CL:0002194!7.46e-17!63;CL:0000576!7.46e-17!63;CL:0000040!7.46e-17!63;CL:0000559!7.46e-17!63;CL:0002009!2.79e-16!65;CL:0000839!5.43e-15!70;CL:0000557!9.36e-15!71;CL:0000766!1.15e-13!76;CL:0000763!1.16e-08!112;CL:0000049!1.16e-08!112;CL:0002087!4.89e-08!119;CL:0002031!1.23e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.44e-09;39!CL:0000234;1.44e-09;39!CL:0000860;4.87e-09;33!CL:0002057;4.87e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.72e-08,42;CL:0002057,8.72e-08,42;CL:0000473,6.78e-07,48;CL:0000234,6.78e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.58e-34;1!CL:0002057;1.87e-07;42 | |||
|ontology_enrichment_disease=DOID:178!1.15e-09!1;DOID:326!1.15e-09!1;DOID:3978!1.15e-09!1;DOID:3394!1.15e-09!1;DOID:5844!1.15e-09!1 | |ontology_enrichment_disease=DOID:178!1.15e-09!1;DOID:326!1.15e-09!1;DOID:3978!1.15e-09!1;DOID:3394!1.15e-09!1;DOID:5844!1.15e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.87e-13!80;UBERON:0001474!7.36e-12!86;UBERON:0007029!3.74e-10!1;UBERON:0002426!4.87e-10!1;UBERON:0003831!4.87e-10!1;UBERON:0003898!4.87e-10!1;UBERON:0004830!4.87e-10!1;UBERON:0001774!4.87e-10!1;UBERON:0003830!4.87e-10!1;UBERON:0005175!4.87e-10!1;UBERON:0003897!4.87e-10!1;UBERON:0001103!4.87e-10!1;UBERON:0010084!4.87e-10!1;UBERON:0004765!8.15e-10!101;UBERON:0001434!8.15e-10!101;UBERON:0002390!1.06e-09!102;UBERON:0003061!1.06e-09!102;UBERON:0000997!2.46e-09!1;UBERON:0005056!2.46e-09!1;UBERON:0002193!1.16e-08!112;UBERON:0002405!2.20e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.84e-34;1!UBERON:0002426;5.97e-34;1!UBERON:0003831;5.97e-34;1!UBERON:0003898;5.97e-34;1!UBERON:0004830;5.97e-34;1!UBERON:0003830;5.97e-34;1!UBERON:0005175;5.97e-34;1!UBERON:0001774;5.97e-34;1!UBERON:0001103;5.97e-34;1!UBERON:0005090;9.86e-18;2!UBERON:0001630;9.86e-18;2!UBERON:0000014;1.12e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.84e-34,1;UBERON:0002426,5.05e-34,1;UBERON:0003831,5.05e-34,1;UBERON:0003898,5.05e-34,1;UBERON:0004830,5.05e-34,1;UBERON:0003830,5.05e-34,1;UBERON:0005175,5.05e-34,1;UBERON:0001774,5.05e-34,1;UBERON:0001103,5.05e-34,1;UBERON:0010084,5.05e-34,1;UBERON:0005090,9.07e-18,2;UBERON:0001630,9.07e-18,2;UBERON:0000014,1.12e-09,4 | |||
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|short_description=p1@KRTAP4-6 | |short_description=p1@KRTAP4-6 | ||
}} | }} |
Latest revision as of 04:34, 20 September 2015
Short description: | p1@KRTAP4-6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP4-6_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -55bp_to_ENST00000345847, NM_030976_5end |
EntrezGene: | KRTAP4-6 |
HGNC: | 18909 |
UniProt: | Q9BYQ5Q9BYR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.72e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.72e-08 | 42 |
defensive cell | 6.78e-07 | 48 |
phagocyte | 6.78e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
surface | 1.84e-34 | 1 |
chest muscle | 5.05e-34 | 1 |
respiratory system muscle | 5.05e-34 | 1 |
skeletal muscle of trunk | 5.05e-34 | 1 |
respiratory system skeletal muscle | 5.05e-34 | 1 |
thoracic segment muscle | 5.05e-34 | 1 |
chest organ | 5.05e-34 | 1 |
muscle of trunk | 5.05e-34 | 1 |
diaphragm | 5.05e-34 | 1 |
future diaphragm | 5.05e-34 | 1 |
muscle structure | 9.07e-18 | 2 |
muscle organ | 9.07e-18 | 2 |
zone of skin | 1.12e-09 | 4 |