FFCP PHASE1:Hg19::chr7:100202467..100202526,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100202467..100202526,+ to FFCP PHASE1:Hg19::chr7:100202467..100202526,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5118 | |EntrezGene=5118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8738 | |HGNC=8738 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_ENST00000460002_5end | |||
|cluster_id=chr7:100202467..100202526,+ | |||
|description=CAGE_peak_5_at_PCOLCE_5end | |||
|id=chr7:100202467..100202526,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.91e-14!312;UBERON:0000483!2.72e-13!309;UBERON:0000481!1.60e-11!347;UBERON:0000025!3.91e-09!194;UBERON:0003075!4.03e-09!86;UBERON:0007284!4.03e-09!86;UBERON:0000064!1.43e-08!219;UBERON:0002346!5.02e-08!90;UBERON:0004111!2.44e-07!241;UBERON:0000477!4.69e-07!286;UBERON:0000019!5.08e-07!19;UBERON:0000047!5.08e-07!19;UBERON:0004088!5.08e-07!19;UBERON:0003072!5.08e-07!19;UBERON:0003071!5.08e-07!19;UBERON:0004128!5.08e-07!19;UBERON:0000970!7.99e-07!20;UBERON:0000475!8.14e-07!365;UBERON:0001456!9.08e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;5.25e-08;19!UBERON:0000047;5.25e-08;19!UBERON:0004088;5.25e-08;19!UBERON:0010230;5.25e-08;19!UBERON:0001801;7.77e-08;14!UBERON:0001456;2.35e-07;21!UBERON:0000970;2.89e-07;20!UBERON:0000020;4.28e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.20e-11,309;UBERON:0000483,1.97e-10,306;UBERON:0003075,2.84e-08,82;UBERON:0007284,2.84e-08,82;UBERON:0000025,2.62e-07,192;UBERON:0001801,2.81e-07,14;UBERON:0010314,3.76e-07,132;UBERON:0002346,3.83e-07,86;UBERON:0003076,4.66e-07,15;UBERON:0003057,4.66e-07,15;UBERON:0000019,6.68e-07,20;UBERON:0000047,6.68e-07,20;UBERON:0010312,6.68e-07,20;UBERON:0004088,6.68e-07,20;UBERON:0010230,6.68e-07,20;UBERON:0003072,6.68e-07,20;UBERON:0004128,6.68e-07,20;UBERON:0003071,6.68e-07,20 | |||
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| ||
|short_description=p5@PCOLCE | |||
}} | }} |
Latest revision as of 07:47, 20 September 2015
Short description: | p5@PCOLCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PCOLCE_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000460002_5end |
EntrezGene: | PCOLCE |
HGNC: | 8738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell layer | 2.20e-11 | 309 |
epithelium | 1.97e-10 | 306 |
neural plate | 2.84e-08 | 82 |
presumptive neural plate | 2.84e-08 | 82 |
tube | 2.62e-07 | 192 |
anterior segment of eyeball | 2.81e-07 | 14 |
structure with developmental contribution from neural crest | 3.76e-07 | 132 |
neurectoderm | 3.83e-07 | 86 |
posterior neural tube | 4.66e-07 | 15 |
chordal neural plate | 4.66e-07 | 15 |
camera-type eye | 6.68e-07 | 20 |
simple eye | 6.68e-07 | 20 |
immature eye | 6.68e-07 | 20 |
ocular region | 6.68e-07 | 20 |
eyeball of camera-type eye | 6.68e-07 | 20 |
optic cup | 6.68e-07 | 20 |
optic vesicle | 6.68e-07 | 20 |
eye primordium | 6.68e-07 | 20 |