FFCP PHASE1:Hg19::chr7:100273846..100273868,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:100273846..100273868,+
|short_description=p8@GNB2
|description=CAGE_peak_8_at_GNB2_5end
|association_with_transcript=0bp_to_ENST00000480159_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2783 | |EntrezGene=2783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4398 | |HGNC=4398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000480159_5end | |||
|cluster_id=chr7:100273846..100273868,+ | |||
|description=CAGE_peak_8_at_GNB2_5end | |||
|id=chr7:100273846..100273868,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.49e-11!76;CL:0002057!2.48e-10!42;CL:0000860!4.42e-09!45;CL:0000839!1.29e-08!70;CL:0002194!4.09e-08!63;CL:0000576!4.09e-08!63;CL:0000040!4.09e-08!63;CL:0000559!4.09e-08!63;CL:0000557!6.95e-08!71;CL:0002009!9.44e-08!65;CL:0002371!2.56e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.01e-08;33!CL:0002057;8.01e-08;33!CL:0000576;1.15e-07;48!CL:0000766;3.68e-07;69!CL:0000359;3.80e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.01e-13,72;CL:0000860,8.83e-10,42;CL:0002057,8.83e-10,42;CL:0000839,1.59e-09,66;CL:0000473,2.13e-09,48;CL:0000234,2.13e-09,48;CL:0000557,3.07e-09,67;CL:0002194,3.19e-09,59;CL:0000576,3.19e-09,59;CL:0000040,3.19e-09,59;CL:0000559,3.19e-09,59;CL:0002009,1.23e-08,61;CL:0000359,2.05e-07,32;CL:0000048,3.95e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.33e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.38e-12!216;UBERON:0001981!1.55e-10!60;UBERON:0007500!1.55e-10!60;UBERON:0004537!1.55e-10!60;UBERON:0006965!1.55e-10!60;UBERON:0002204!2.31e-10!167;UBERON:0001637!5.56e-10!42;UBERON:0003509!5.56e-10!42;UBERON:0004572!5.56e-10!42;UBERON:0000926!1.85e-09!448;UBERON:0004120!1.85e-09!448;UBERON:0006603!1.85e-09!448;UBERON:0004872!8.08e-09!84;UBERON:0000055!8.19e-09!69;UBERON:0004573!1.86e-07!33;UBERON:0004571!1.86e-07!33;UBERON:0002371!4.10e-07!80;UBERON:0000486!7.56e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.42e-07;42!UBERON:0003509;5.42e-07;42!UBERON:0004572;5.42e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.71e-15,315;UBERON:0004120,1.71e-15,315;UBERON:0006603,1.71e-15,315;UBERON:0003081,6.75e-13,203;UBERON:0001637,2.69e-10,42;UBERON:0003509,2.69e-10,42;UBERON:0004572,2.69e-10,42;UBERON:0007500,4.24e-10,59;UBERON:0001981,4.24e-10,59;UBERON:0004537,4.24e-10,59;UBERON:0006965,4.24e-10,59;UBERON:0002204,1.53e-09,167;UBERON:0002371,9.35e-09,76;UBERON:0000055,2.97e-08,68;UBERON:0004872,4.79e-08,83;UBERON:0001474,6.59e-08,82;UBERON:0002405,1.76e-07,93;UBERON:0004573,1.96e-07,33;UBERON:0004571,1.96e-07,33;UBERON:0000486,5.20e-07,83 | |||
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| ||
|short_description=p8@GNB2 | |||
}} | }} |
Latest revision as of 08:47, 20 September 2015
Short description: | p8@GNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GNB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000480159_5end |
EntrezGene: | GNB2 |
HGNC: | 4398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.01e-13 | 72 |
classical monocyte | 8.83e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.83e-10 | 42 |
myeloid lineage restricted progenitor cell | 1.59e-09 | 66 |
defensive cell | 2.13e-09 | 48 |
phagocyte | 2.13e-09 | 48 |
granulocyte monocyte progenitor cell | 3.07e-09 | 67 |
monopoietic cell | 3.19e-09 | 59 |
monocyte | 3.19e-09 | 59 |
monoblast | 3.19e-09 | 59 |
promonocyte | 3.19e-09 | 59 |
macrophage dendritic cell progenitor | 1.23e-08 | 61 |
vascular associated smooth muscle cell | 2.05e-07 | 32 |
multi fate stem cell | 3.95e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.71e-15 | 315 |
mesoderm-derived structure | 1.71e-15 | 315 |
presumptive mesoderm | 1.71e-15 | 315 |
lateral plate mesoderm | 6.75e-13 | 203 |
artery | 2.69e-10 | 42 |
arterial blood vessel | 2.69e-10 | 42 |
arterial system | 2.69e-10 | 42 |
epithelial tube open at both ends | 4.24e-10 | 59 |
blood vessel | 4.24e-10 | 59 |
blood vasculature | 4.24e-10 | 59 |
vascular cord | 4.24e-10 | 59 |
musculoskeletal system | 1.53e-09 | 167 |
bone marrow | 9.35e-09 | 76 |
vessel | 2.97e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 4.79e-08 | 83 |
bone element | 6.59e-08 | 82 |
immune system | 1.76e-07 | 93 |
systemic artery | 1.96e-07 | 33 |
systemic arterial system | 1.96e-07 | 33 |
multilaminar epithelium | 5.20e-07 | 83 |