FFCP PHASE1:Hg19::chr19:6591191..6591209,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=970 | |EntrezGene=970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11937 | |HGNC=11937 | ||
|TSSclassifier=strong | |||
|UniProt=P32970,Q53XX4 | |UniProt=P32970,Q53XX4 | ||
|association_with_transcript=-28bp_to_ENST00000245903,NM_001252,uc002mfi.2,uc010xjf.1_5end | |association_with_transcript=-28bp_to_ENST00000245903,NM_001252,uc002mfi.2,uc010xjf.1_5end | ||
|cluster_id=chr19:6591191..6591209,- | |||
|coexpression_cluster_id=C1828 | |coexpression_cluster_id=C1828 | ||
|description=CAGE_peak_5_at_CD70_5end | |description=CAGE_peak_5_at_CD70_5end | ||
|id=chr19:6591191..6591209,- | |id=chr19:6591191..6591209,- | ||
|ontology_enrichment_celltype=CL:0000945!5.31e-10!24;CL:0000826!5.31e-10!24;CL:1000497!5.40e-08!18;CL:0002518!5.40e-08!18 | |ontology_enrichment_celltype=CL:0000945!5.31e-10!24;CL:0000826!5.31e-10!24;CL:1000497!5.40e-08!18;CL:0002518!5.40e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.34e-08;24!CL:0002178;1.55e-07;3!CL:1000497;5.44e-07;17!CL:0002518;5.44e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.19e-08,24;CL:0000826,1.19e-08,24;CL:0002178,1.57e-07,3;CL:1000497,5.73e-07,17;CL:0002518,5.73e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.77e-08;29 | |||
|ontology_enrichment_disease=DOID:14566!4.99e-22!239;DOID:162!2.08e-21!235;DOID:0050686!7.88e-12!137;DOID:2531!1.54e-09!51;DOID:0060083!1.54e-09!51;DOID:305!7.01e-09!106;DOID:0050687!6.84e-08!143;DOID:0060058!4.08e-07!10 | |ontology_enrichment_disease=DOID:14566!4.99e-22!239;DOID:162!2.08e-21!235;DOID:0050686!7.88e-12!137;DOID:2531!1.54e-09!51;DOID:0060083!1.54e-09!51;DOID:305!7.01e-09!106;DOID:0050687!6.84e-08!143;DOID:0060058!4.08e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.33e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.89e-19,239;DOID:162,8.66e-18,235;DOID:0050686,2.58e-11,137;DOID:0060058,3.57e-10,10;DOID:2531,1.13e-09,51;DOID:0060083,1.13e-09,51;DOID:0050687,1.63e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.25e-12!9;UBERON:0002113!2.22e-09!27;UBERON:0003918!2.22e-09!27;UBERON:0005095!2.22e-09!27;UBERON:0007687!2.22e-09!27;UBERON:0000489!4.24e-07!32;UBERON:0001557!7.05e-07!19;UBERON:0003887!7.22e-07!21 | |ontology_enrichment_uberon=UBERON:0001737!3.25e-12!9;UBERON:0002113!2.22e-09!27;UBERON:0003918!2.22e-09!27;UBERON:0005095!2.22e-09!27;UBERON:0007687!2.22e-09!27;UBERON:0000489!4.24e-07!32;UBERON:0001557!7.05e-07!19;UBERON:0003887!7.22e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.48e-22;9!UBERON:0001557;9.48e-22;9!UBERON:0002113;7.23e-09;24!UBERON:0011143;7.23e-09;24!UBERON:0000489;6.14e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.97e-22,9;UBERON:0001557,3.29e-09,19;UBERON:0002113,5.97e-08,26;UBERON:0003918,5.97e-08,26;UBERON:0011143,5.97e-08,26;UBERON:0005095,5.97e-08,26;UBERON:0007687,5.97e-08,26 | |||
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|short_description=p5@CD70 | |short_description=p5@CD70 | ||
}} | }} |
Latest revision as of 17:21, 24 September 2015
Short description: | p5@CD70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD70_5end |
Coexpression cluster: | C1828_epithelioid_lymphangiectasia_cord_meningioma_adult_renal_serous |
Association with transcript: | -28bp_to_ENST00000245903, NM_001252, uc002mfi.2, uc010xjf.1_5end |
EntrezGene: | CD70 |
HGNC: | 11937 |
UniProt: | P32970Q53XX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.19e-08 | 24 |
pro-B cell | 1.19e-08 | 24 |
epithelial cell of stomach | 1.57e-07 | 3 |
kidney cell | 5.73e-07 | 17 |
kidney epithelial cell | 5.73e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.97e-22 | 9 |
upper respiratory tract | 3.29e-09 | 19 |
kidney | 5.97e-08 | 26 |
kidney mesenchyme | 5.97e-08 | 26 |
upper urinary tract | 5.97e-08 | 26 |
kidney rudiment | 5.97e-08 | 26 |
kidney field | 5.97e-08 | 26 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.89e-19 | 239 |
cancer | 8.66e-18 | 235 |
organ system cancer | 2.58e-11 | 137 |
lymphoma | 3.57e-10 | 10 |
hematologic cancer | 1.13e-09 | 51 |
immune system cancer | 1.13e-09 | 51 |
cell type cancer | 1.63e-07 | 143 |