FFCP PHASE1:Hg19::chr5:134369879..134369898,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9004 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P78337 | ||
|association_with_transcript=65bp_to_NM_002653,uc010jea.2_5end | |association_with_transcript=65bp_to_NM_002653,uc010jea.2_5end | ||
|cluster_id=chr5:134369879..134369898,- | |cluster_id=chr5:134369879..134369898,- | ||
Latest revision as of 17:42, 24 September 2015
| Short description: | p2@PITX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_PITX1_5end |
| Coexpression cluster: | C2802_esophagus_Prostate_biphenotypic_cervical_tonsil_Smooth_anaplastic |
| Association with transcript: | 65bp_to_NM_002653, uc010jea.2_5end |
| EntrezGene: | PITX1 |
| HGNC: | 9004 |
| UniProt: | P78337 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@PITX1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelial cell | 1.17e-18 | 42 |
| endodermal cell | 1.24e-18 | 58 |
| epithelial cell | 3.56e-16 | 253 |
| epithelial cell of alimentary canal | 4.09e-13 | 20 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 4.26e-36 | 160 |
| endoderm | 4.26e-36 | 160 |
| presumptive endoderm | 4.26e-36 | 160 |
| digestive system | 1.61e-35 | 145 |
| digestive tract | 1.61e-35 | 145 |
| primitive gut | 1.61e-35 | 145 |
| subdivision of digestive tract | 9.13e-31 | 118 |
| orifice | 1.78e-18 | 36 |
| respiratory system | 3.99e-16 | 74 |
| foregut | 5.36e-15 | 87 |
Showing 1 to 10 of 47 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 2.07e-21 | 235 |
| carcinoma | 5.47e-21 | 106 |
| disease of cellular proliferation | 4.77e-20 | 239 |
| cell type cancer | 1.23e-18 | 143 |
| squamous cell carcinoma | 3.06e-08 | 14 |
Showing 1 to 5 of 5 entries
