FFCP PHASE1:Hg19::chr17:41622901..41622913,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3493 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-147bp_to_uc002idy.1_5end | |||
|cluster_id=chr17:41622901..41622913,- | |||
|coexpression_cluster_id=C3633 | |||
|description=CAGE_peak_16_at_ETV4_5end | |||
|id=chr17:41622901..41622913,- | |||
|ontology_enrichment_celltype=CL:0000066!5.43e-17!254;CL:0002321!1.16e-10!248;CL:0000220!4.82e-10!246;CL:0000223!5.82e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.77e-20;7!CL:0000586;3.77e-20;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.97e-20,7;CL:0000586,3.97e-20,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.60e-14;10!UBERON:0005564;3.60e-14;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.19e-09!143;DOID:305!2.97e-09!106;DOID:14566!7.68e-09!239;DOID:162!9.17e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.72e-17;2!DOID:3371;1.30e-09;1!DOID:4549;1.30e-09;1!DOID:5861;1.30e-09;1!DOID:6496;1.30e-09;1!DOID:3112;1.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.08e-18,2;DOID:3112,9.70e-10,1;DOID:3371,1.36e-09,1;DOID:4549,1.36e-09,1;DOID:5861,1.36e-09,1;DOID:6496,1.36e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000466!2.92e-10!126;UBERON:0000464!2.70e-09!104;UBERON:0004119!8.41e-09!169;UBERON:0000925!8.41e-09!169;UBERON:0006595!8.41e-09!169;UBERON:0000490!2.57e-08!138;UBERON:0001048!4.57e-08!168;UBERON:0000119!6.07e-08!312;UBERON:0003104!6.75e-08!238;UBERON:0009142!6.75e-08!238;UBERON:0001007!7.26e-08!155;UBERON:0001555!7.26e-08!155;UBERON:0007026!7.26e-08!155;UBERON:0000483!1.73e-07!309;UBERON:0003914!1.87e-07!118;UBERON:0000077!7.63e-07!130;UBERON:0003886!8.68e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.16e-17;8!UBERON:0003135;6.73e-13;11!UBERON:0000945;1.10e-07;5!UBERON:0010039;1.10e-07;5!UBERON:0000991;8.22e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,6.95e-13,11;UBERON:0000991,8.36e-07,21;UBERON:0009196,8.36e-07,21;UBERON:0009117,8.36e-07,21;UBERON:0005564,8.36e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0.602694528023977,2.19093027116212,0,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0.229240217243854,0.246301768349837,0.0787107813136792,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0,0.347140501607594,0.56530794192401,1.25849830862972,1.10047216776027,0.835979866147242,0,0,0,0,0.760272105718513,0,0.735326160691737,0,0.357198913136319,0.673588117878509,0.675668882899933,0,0,1.09921046358244,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.468642863667593,0,0,0.298897361103602,0.352303495931295,0,0.140450806702248,0.61246251376468,0.368502951935304,0.206651562351531,0,0,0,0,0.336672227908132,0.375355559615893,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.386521706326594,0.818238361772504,0,0.487894824518382,0.265059536642971,0,0.518305275076852,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.658501712451753,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.447792613514241,0,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.448524337381443,0,0.66004457238855,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.328508624055237,0.519254429183621,0.232420756919918,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0.364182336013434,0,1.80479845162965,0.15403067420883,1.56869953835371,0,0.422206515571503,0,0.340187410553031,0,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0,0,0.495854746082934,0.768760269460425,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0.95460974377781,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0.670302275535787,0,0,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0.20453736500431,0.246169610922139,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0,0,0,0.179515288819544,0,0.31900115973192,0,0,0,0,0,0,0.588187602953219,0.167821586975843,0,0,0,0.326465616318295,0.565412285735763,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0.941798755221676,1.19472429772959,0.284609546029793,0,0.347119476670262,0.195984794828755,0,0.17472666824203,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,1.235585773681,0,0.274083849293502,0.397429223405979,0,0,0,0.426905989478705,0,0.72045208577053,2.40526851948423,0,0,0.372757606696298,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.494495150286999,0.943649613958588,0.492137407573744,0.423366660328922,0,0.136203406111576,0,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0,0.104909176269996,1.16160370171347,0.717149357331379,0,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0,0.453248366080503,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.124980407962107,1.36484205787483,1.7127920012698,0.705797459094515,0,0,0.149254802886874,0,0,0,0,0,0.457680136793847,0,0,0.887130899937803,0.318593534327405,0.449803112163605,0.465788870628778,0.829412415681711,0,0,0.150257608997218,0,0,0.181848659202559,0.429642228169954,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0,0.244736704506468,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.215649622793364,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0.808679663052368,0,0,0,0,0,0.781514011233092,0,1.47394725759087,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0.171488009437418,0,0,0.118193840883968,0.444925607568277,0,0,1.40136081656895,0,0,0,0,0,0.581207126840626,0.521574816907738,0.801711364730253,0.207216164163037,0,0,0,0.236664001461131,0.255640214277473,0,0.22910686854405,0,0,0,1.07965256976767,0.365753774946808,0,0,0,0,0,0,0,1.1294608203896,0,0.150962843566674,0,0,0.470317296361523,0,0.707029641304878,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0,0.473314686579554,0,0,0.5290268405154,0,0,0,0.252332849670158,0.874124575709564,0,3.16165372200143,2.13773924212448,8.45433075720573,3.50990555009325,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0.628776414746108,0,0,0.406896178315738,0,0,0 | |||
|short_description=p16@ETV4 | |||
}} |
Latest revision as of 18:27, 24 September 2015
Short description: | p16@ETV4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ETV4_5end |
Coexpression cluster: | C3633_testicular_large_melanoma_papillary_osteosarcoma_Trabecular_gastric |
Association with transcript: | -147bp_to_uc002idy.1_5end |
EntrezGene: | ETV4 |
HGNC: | 3493 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.97e-20 | 7 |
germ cell | 3.97e-20 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 6.95e-13 | 11 |
gonad | 8.36e-07 | 21 |
indifferent external genitalia | 8.36e-07 | 21 |
indifferent gonad | 8.36e-07 | 21 |
gonad primordium | 8.36e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.08e-18 | 2 |
papillary adenocarcinoma | 9.70e-10 | 1 |
chondrosarcoma | 1.36e-09 | 1 |
extraosseous chondrosarcoma | 1.36e-09 | 1 |
myxoid chondrosarcoma | 1.36e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 1.36e-09 | 1 |