FFCP PHASE1:Hg19::chr11:102668234..102668245,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4312 | |EntrezGene=4312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7155 | |HGNC=7155 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-82bp_to_AK225495_5end | |association_with_transcript=-82bp_to_AK225495_5end | ||
|cluster_id=chr11:102668234..102668245,- | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_11_at_MMP1_5end | |description=CAGE_peak_11_at_MMP1_5end | ||
|id=chr11:102668234..102668245,- | |id=chr11:102668234..102668245,- | ||
|ontology_enrichment_celltype=CL:0000359!1.21e-27!32;CL:0000192!2.09e-23!42;CL:0000514!2.09e-23!42;CL:0000222!4.11e-19!119;CL:0000187!5.03e-18!54;CL:0002139!1.29e-17!24;CL:0000055!5.28e-17!180;CL:0000680!1.11e-16!57;CL:0000056!1.11e-16!57;CL:0000355!1.11e-16!57;CL:0000183!7.27e-16!59;CL:0000393!1.77e-15!60;CL:0000211!1.77e-15!60;CL:1000413!1.10e-13!9;CL:0000220!1.99e-13!246;CL:0002321!3.38e-13!248;CL:0002539!4.28e-13!10;CL:0000071!7.78e-12!18;CL:0002546!7.78e-12!18;CL:0000115!9.96e-11!35;CL:0002544!6.91e-09!6;CL:0002494!8.89e-09!16;CL:0002594!1.13e-08!4;CL:0000057!1.81e-08!75;CL:0002595!6.17e-08!5;CL:0002551!1.01e-07!6;CL:0002078!1.01e-07!44;CL:0005020!1.27e-07!6;CL:0002138!1.27e-07!6;CL:0005022!1.27e-07!6;CL:0002371!1.80e-07!591;CL:0002592!3.10e-07!3;CL:0000548!8.99e-07!679;CL:0000004!8.99e-07!679;CL:0000255!8.99e-07!679;CL:0000144!9.17e-07!625 | |ontology_enrichment_celltype=CL:0000359!1.21e-27!32;CL:0000192!2.09e-23!42;CL:0000514!2.09e-23!42;CL:0000222!4.11e-19!119;CL:0000187!5.03e-18!54;CL:0002139!1.29e-17!24;CL:0000055!5.28e-17!180;CL:0000680!1.11e-16!57;CL:0000056!1.11e-16!57;CL:0000355!1.11e-16!57;CL:0000183!7.27e-16!59;CL:0000393!1.77e-15!60;CL:0000211!1.77e-15!60;CL:1000413!1.10e-13!9;CL:0000220!1.99e-13!246;CL:0002321!3.38e-13!248;CL:0002539!4.28e-13!10;CL:0000071!7.78e-12!18;CL:0002546!7.78e-12!18;CL:0000115!9.96e-11!35;CL:0002544!6.91e-09!6;CL:0002494!8.89e-09!16;CL:0002594!1.13e-08!4;CL:0000057!1.81e-08!75;CL:0002595!6.17e-08!5;CL:0002551!1.01e-07!6;CL:0002078!1.01e-07!44;CL:0005020!1.27e-07!6;CL:0002138!1.27e-07!6;CL:0005022!1.27e-07!6;CL:0002371!1.80e-07!591;CL:0002592!3.10e-07!3;CL:0000548!8.99e-07!679;CL:0000004!8.99e-07!679;CL:0000255!8.99e-07!679;CL:0000144!9.17e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.02e-34;32!CL:0002595;3.00e-21;5!CL:0000192;4.19e-21;43!CL:0002593;5.17e-14;2!CL:0000187;1.04e-10;55!CL:0002539;1.84e-10;10!CL:0002592;1.81e-09;3!CL:0000393;4.10e-09;61!CL:0000211;4.10e-09;61!CL:0002379;5.77e-08;1!CL:1000306;2.28e-07;4!CL:0002547;2.28e-07;4!CL:0002594;3.95e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.40e-36,32;CL:0000192,3.22e-26,43;CL:0000514,3.22e-26,43;CL:0002595,3.24e-21,5;CL:0000187,6.97e-20,55;CL:0000680,1.04e-18,58;CL:0000056,1.04e-18,58;CL:0000355,1.04e-18,58;CL:0000393,1.19e-17,61;CL:0000211,1.19e-17,61;CL:0002593,6.28e-14,2;CL:0000222,3.10e-13,121;CL:0002539,1.73e-10,10;CL:0002592,1.73e-09,3;CL:0002379,5.58e-08,1;CL:1000306,2.32e-07,4;CL:0002547,2.32e-07,4;CL:0002594,3.71e-07,4;CL:0002321,8.16e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;4.19e-21;43!CL:0000355;1.31e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.92e-09;3!DOID:127;4.92e-09;3!DOID:3112;4.88e-08;1!DOID:3620;5.77e-08;1!DOID:3565;5.77e-08;1!DOID:2513;2.17e-07;1!DOID:0060072;5.54e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.56e-09,3;DOID:127,6.56e-09,3;DOID:3112,4.89e-08,1;DOID:3620,5.58e-08,1;DOID:3565,5.58e-08,1;DOID:2513,2.47e-07,1;DOID:0060072,6.86e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.75e-50!42;UBERON:0003509!2.75e-50!42;UBERON:0004572!2.75e-50!42;UBERON:0000055!1.50e-42!69;UBERON:0001981!6.86e-39!60;UBERON:0007500!6.86e-39!60;UBERON:0004537!6.86e-39!60;UBERON:0006965!6.86e-39!60;UBERON:0004573!1.74e-38!33;UBERON:0004571!1.74e-38!33;UBERON:0002049!1.71e-35!79;UBERON:0007798!1.71e-35!79;UBERON:0004872!8.04e-35!84;UBERON:0004535!1.59e-30!110;UBERON:0001009!2.47e-29!113;UBERON:0003914!1.14e-24!118;UBERON:0000947!9.77e-23!21;UBERON:0010191!9.77e-23!21;UBERON:0004290!3.82e-20!70;UBERON:0000914!4.61e-18!83;UBERON:0002329!4.61e-18!83;UBERON:0003077!4.61e-18!83;UBERON:0003059!4.61e-18!83;UBERON:0007282!4.61e-18!83;UBERON:0009618!4.61e-18!83;UBERON:0007285!4.61e-18!83;UBERON:0000490!1.14e-17!138;UBERON:0000486!7.34e-16!82;UBERON:0001134!4.20e-15!61;UBERON:0002036!4.20e-15!61;UBERON:0003082!4.20e-15!61;UBERON:0002385!2.16e-14!63;UBERON:0001015!2.16e-14!63;UBERON:0000383!2.16e-14!63;UBERON:0003915!1.10e-13!9;UBERON:0004700!1.10e-13!9;UBERON:0001917!1.10e-13!9;UBERON:0004237!4.28e-13!10;UBERON:0004695!4.28e-13!10;UBERON:0002111!4.28e-13!10;UBERON:0004178!4.28e-13!10;UBERON:0004111!8.54e-13!241;UBERON:0001986!7.78e-12!18;UBERON:0004638!7.78e-12!18;UBERON:0004852!7.78e-12!18;UBERON:0000477!1.67e-11!286;UBERON:0000487!7.31e-11!22;UBERON:0000025!6.18e-10!194;UBERON:0000483!1.96e-09!309;UBERON:0005256!2.55e-09!143;UBERON:0006914!3.30e-09!25;UBERON:0000119!3.37e-09!312;UBERON:0001310!1.13e-08!4;UBERON:0001135!3.70e-08!15;UBERON:0003834!6.17e-08!5;UBERON:0001533!6.17e-08!5;UBERON:0003081!2.48e-07!216;UBERON:0001621!3.10e-07!3;UBERON:0002067!4.10e-07!9;UBERON:0004016!4.10e-07!9;UBERON:0010083!4.10e-07!9;UBERON:0000926!4.21e-07!448;UBERON:0004120!4.21e-07!448;UBERON:0006603!4.21e-07!448;UBERON:0003498!9.31e-07!5;UBERON:0005985!9.31e-07!5 | |||
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|short_description=p11@MMP1 | |short_description=p11@MMP1 | ||
}} | }} |
Latest revision as of 18:30, 24 September 2015
Short description: | p11@MMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MMP1_5end |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | -82bp_to_AK225495_5end |
EntrezGene: | MMP1 |
HGNC: | 7155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.40e-36 | 32 |
smooth muscle cell | 3.22e-26 | 43 |
smooth muscle myoblast | 3.22e-26 | 43 |
smooth muscle cell of the subclavian artery | 3.24e-21 | 5 |
muscle cell | 6.97e-20 | 55 |
muscle precursor cell | 1.04e-18 | 58 |
myoblast | 1.04e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.04e-18 | 58 |
electrically responsive cell | 1.19e-17 | 61 |
electrically active cell | 1.19e-17 | 61 |
smooth muscle cell of the internal thoracic artery | 6.28e-14 | 2 |
mesodermal cell | 3.10e-13 | 121 |
aortic smooth muscle cell | 1.73e-10 | 10 |
smooth muscle cell of the coronary artery | 1.73e-09 | 3 |
meningothelial cell | 5.58e-08 | 1 |
fibroblast of tunica adventitia of artery | 2.32e-07 | 4 |
fibroblast of the aortic adventitia | 2.32e-07 | 4 |
smooth muscle cell of the umbilical artery | 3.71e-07 | 4 |
embryonic cell | 8.16e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.56e-09 | 3 |
leiomyoma | 6.56e-09 | 3 |
papillary adenocarcinoma | 4.89e-08 | 1 |
central nervous system cancer | 5.58e-08 | 1 |
meningioma | 5.58e-08 | 1 |
basal cell carcinoma | 2.47e-07 | 1 |
benign neoplasm | 6.86e-07 | 4 |