FFCP PHASE1:Hg19::chr8:101719197..101719226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26986 | |EntrezGene=26986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8554 | |HGNC=8554 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522658_5end | |association_with_transcript=0bp_to_ENST00000522658_5end | ||
|cluster_id=chr8:101719197..101719226,- | |||
|description=CAGE_peak_11_at_PABPC1_5end | |description=CAGE_peak_11_at_PABPC1_5end | ||
|id=chr8:101719197..101719226,- | |id=chr8:101719197..101719226,- | ||
|ontology_enrichment_celltype=CL:0000063!4.85e-13!578;CL:0000548!1.01e-10!679;CL:0000004!1.01e-10!679;CL:0000255!1.01e-10!679;CL:0000012!1.46e-10!682;CL:0002057!6.98e-09!42;CL:0000860!1.49e-08!45;CL:0000763!2.63e-08!112;CL:0000049!2.63e-08!112;CL:0000003!3.69e-08!722;CL:0002032!3.47e-07!165;CL:0000837!3.47e-07!165;CL:0002194!4.23e-07!63;CL:0000576!4.23e-07!63;CL:0000040!4.23e-07!63;CL:0000559!4.23e-07!63;CL:0000988!4.38e-07!182;CL:0002009!7.48e-07!65;CL:0000144!7.71e-07!625 | |ontology_enrichment_celltype=CL:0000063!4.85e-13!578;CL:0000548!1.01e-10!679;CL:0000004!1.01e-10!679;CL:0000255!1.01e-10!679;CL:0000012!1.46e-10!682;CL:0002057!6.98e-09!42;CL:0000860!1.49e-08!45;CL:0000763!2.63e-08!112;CL:0000049!2.63e-08!112;CL:0000003!3.69e-08!722;CL:0002032!3.47e-07!165;CL:0000837!3.47e-07!165;CL:0002194!4.23e-07!63;CL:0000576!4.23e-07!63;CL:0000040!4.23e-07!63;CL:0000559!4.23e-07!63;CL:0000988!4.38e-07!182;CL:0002009!7.48e-07!65;CL:0000144!7.71e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.79e-08;33!CL:0002057;1.79e-08;33!CL:0000473;9.67e-07;39!CL:0000234;9.67e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.19e-10,108;CL:0000049,4.19e-10,108;CL:0002032,3.03e-09,161;CL:0000837,3.03e-09,161;CL:0000860,5.06e-09,42;CL:0002057,5.06e-09,42;CL:0000988,6.99e-09,177;CL:0000037,1.06e-08,168;CL:0000473,1.42e-08,48;CL:0000234,1.42e-08,48;CL:0002194,6.89e-08,59;CL:0000576,6.89e-08,59;CL:0000040,6.89e-08,59;CL:0000559,6.89e-08,59;CL:0002009,8.64e-08,61;CL:0000839,3.16e-07,66;CL:0000557,4.00e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.43e-09!239;DOID:162!1.51e-08!235;DOID:2531!4.94e-08!51;DOID:0060083!4.94e-08!51;DOID:1240!2.25e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.94e-08,51;DOID:0060083,1.94e-08,51;DOID:1240,1.09e-07,39;DOID:14566,2.72e-07,239;DOID:162,6.56e-07,235;DOID:8692,9.20e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p11@PABPC1 | |short_description=p11@PABPC1 | ||
}} | }} |
Latest revision as of 20:06, 24 September 2015
Short description: | p11@PABPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PABPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000522658_5end |
EntrezGene: | PABPC1 |
HGNC: | 8554 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.19e-10 | 108 |
common myeloid progenitor | 4.19e-10 | 108 |
hematopoietic oligopotent progenitor cell | 3.03e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.03e-09 | 161 |
classical monocyte | 5.06e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.06e-09 | 42 |
hematopoietic cell | 6.99e-09 | 177 |
hematopoietic stem cell | 1.06e-08 | 168 |
defensive cell | 1.42e-08 | 48 |
phagocyte | 1.42e-08 | 48 |
monopoietic cell | 6.89e-08 | 59 |
monocyte | 6.89e-08 | 59 |
monoblast | 6.89e-08 | 59 |
promonocyte | 6.89e-08 | 59 |
macrophage dendritic cell progenitor | 8.64e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.16e-07 | 66 |
granulocyte monocyte progenitor cell | 4.00e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.94e-08 | 51 |
immune system cancer | 1.94e-08 | 51 |
leukemia | 1.09e-07 | 39 |
disease of cellular proliferation | 2.72e-07 | 239 |
cancer | 6.56e-07 | 235 |
myeloid leukemia | 9.20e-07 | 31 |