FFCP PHASE1:Hg19::chr6:134210243..134210257,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11632 | |||
|TSSclassifier=strong | |||
|UniProt=O43680 | |||
|association_with_transcript=-1bp_to_NM_198392,uc003qei.3,uc003qej.2_5end | |||
|cluster_id=chr6:134210243..134210257,+ | |||
|description=CAGE_peak_1_at_TCF21_5end | |||
|id=chr6:134210243..134210257,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.64e-25!180;CL:0000183!3.14e-19!59;CL:0000187!3.91e-18!54;CL:0000680!8.65e-17!57;CL:0000056!8.65e-17!57;CL:0000355!8.65e-17!57;CL:0000192!1.99e-16!42;CL:0000514!1.99e-16!42;CL:0000393!2.25e-16!60;CL:0000211!2.25e-16!60;CL:0000057!2.58e-16!75;CL:0002494!1.53e-10!16;CL:0000359!9.77e-10!32;CL:0000222!5.82e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.54e-13;43!CL:0002494;1.71e-12;16!CL:0000187;1.20e-09;55!CL:0000359;1.21e-09;32!CL:0002539;1.81e-07;10!CL:0000393;2.79e-07;61!CL:0000211;2.79e-07;61!CL:0000057;4.48e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.42e-18,43;CL:0000514,1.42e-18,43;CL:0000187,1.01e-16,55;CL:0000680,4.16e-15,58;CL:0000056,4.16e-15,58;CL:0000355,4.16e-15,58;CL:0000057,1.83e-14,76;CL:0000393,1.13e-13,61;CL:0000211,1.13e-13,61;CL:0002494,1.77e-12,16;CL:0000359,7.06e-10,32;CL:0002539,1.85e-07,10;CL:0000222,7.57e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.54e-13;43!CL:0000355;7.83e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.41e-21!143;UBERON:0000481!3.56e-21!347;UBERON:0002385!5.89e-18!63;UBERON:0001015!5.89e-18!63;UBERON:0000383!5.89e-18!63;UBERON:0003103!1.36e-17!69;UBERON:0002100!3.19e-17!216;UBERON:0001134!8.26e-17!61;UBERON:0002036!8.26e-17!61;UBERON:0003082!8.26e-17!61;UBERON:0007100!1.10e-16!27;UBERON:0000914!1.93e-16!83;UBERON:0002329!1.93e-16!83;UBERON:0003077!1.93e-16!83;UBERON:0003059!1.93e-16!83;UBERON:0007282!1.93e-16!83;UBERON:0009618!1.93e-16!83;UBERON:0007285!1.93e-16!83;UBERON:0003914!3.11e-16!118;UBERON:0004290!6.20e-16!70;UBERON:0000475!6.75e-16!365;UBERON:0000948!3.34e-15!24;UBERON:0005498!3.34e-15!24;UBERON:0004140!3.34e-15!24;UBERON:0009881!3.34e-15!24;UBERON:0004141!3.34e-15!24;UBERON:0003084!3.34e-15!24;UBERON:0007005!3.34e-15!24;UBERON:0004139!3.34e-15!24;UBERON:0004291!3.34e-15!24;UBERON:0004872!1.44e-14!84;UBERON:0003104!1.99e-14!238;UBERON:0009142!1.99e-14!238;UBERON:0000477!8.15e-13!286;UBERON:0000468!1.58e-12!659;UBERON:0000119!1.65e-11!312;UBERON:0000483!1.75e-11!309;UBERON:0001009!2.38e-11!113;UBERON:0000486!3.41e-11!82;UBERON:0004535!2.65e-10!110;UBERON:0004111!3.49e-10!241;UBERON:0001135!4.95e-10!15;UBERON:0003886!7.16e-10!63;UBERON:0000467!2.34e-09!625;UBERON:0000480!3.18e-09!626;UBERON:0002049!8.66e-09!79;UBERON:0007798!8.66e-09!79;UBERON:0000025!1.32e-08!194;UBERON:0000490!1.74e-08!138;UBERON:0002553!2.44e-08!70;UBERON:0000062!6.02e-08!511;UBERON:0004876!6.35e-08!20;UBERON:0002417!7.84e-08!61;UBERON:0000916!7.84e-08!61;UBERON:0003887!1.19e-07!21;UBERON:0003064!1.32e-07!37;UBERON:0000466!1.65e-07!126;UBERON:0001048!1.77e-07!168;UBERON:0000922!2.06e-07!612;UBERON:0000926!2.38e-07!448;UBERON:0004120!2.38e-07!448;UBERON:0006603!2.38e-07!448;UBERON:0000479!3.81e-07!787;UBERON:0000464!4.47e-07!104;UBERON:0000080!5.91e-07!18;UBERON:0002120!5.91e-07!18;UBERON:0004875!5.91e-07!18;UBERON:0005721!5.91e-07!18;UBERON:0005754!5.91e-07!18;UBERON:0007297!5.91e-07!18;UBERON:0002050!6.05e-07!605;UBERON:0005423!6.05e-07!605;UBERON:0007023!7.34e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.41e-19;25!UBERON:0000948;4.58e-17;22!UBERON:0001135;7.06e-12;15!UBERON:0003103;1.69e-08;61!UBERON:0004237;1.81e-07;10!UBERON:0004695;1.81e-07;10!UBERON:0002111;1.81e-07;10!UBERON:0004178;1.81e-07;10!UBERON:0003688;5.51e-07;6!UBERON:0002358;5.51e-07;6!UBERON:0003684;5.51e-07;6!UBERON:0001178;5.51e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.69e-24,160;UBERON:0009142,3.69e-24,160;UBERON:0007100,5.94e-20,27;UBERON:0005256,2.71e-18,122;UBERON:0003914,3.15e-18,117;UBERON:0000948,3.79e-18,24;UBERON:0005498,3.79e-18,24;UBERON:0004140,3.79e-18,24;UBERON:0009881,3.79e-18,24;UBERON:0004141,3.79e-18,24;UBERON:0003084,3.79e-18,24;UBERON:0007005,3.79e-18,24;UBERON:0004139,3.79e-18,24;UBERON:0004291,3.79e-18,24;UBERON:0003103,4.40e-18,68;UBERON:0002100,3.06e-17,199;UBERON:0002385,5.38e-16,64;UBERON:0001015,5.38e-16,64;UBERON:0000383,5.38e-16,64;UBERON:0007503,6.73e-16,78;UBERON:0004872,1.03e-15,83;UBERON:0001134,9.66e-15,62;UBERON:0002036,9.66e-15,62;UBERON:0003082,9.66e-15,62;UBERON:0007524,4.45e-14,73;UBERON:0002329,5.75e-14,71;UBERON:0003059,5.75e-14,71;UBERON:0007282,5.75e-14,71;UBERON:0004290,5.75e-14,71;UBERON:0009618,5.75e-14,71;UBERON:0003077,1.46e-13,72;UBERON:0007285,1.46e-13,72;UBERON:0001009,1.11e-12,112;UBERON:0001135,7.35e-12,15;UBERON:0004535,1.94e-11,109;UBERON:0000483,2.41e-11,306;UBERON:0000119,6.45e-11,309;UBERON:0004111,2.12e-10,240;UBERON:0001048,6.74e-10,160;UBERON:0000926,6.92e-10,315;UBERON:0004120,6.92e-10,315;UBERON:0006603,6.92e-10,315;UBERON:0000486,7.50e-10,83;UBERON:0003886,3.20e-09,54;UBERON:0002417,6.57e-09,60;UBERON:0000916,6.57e-09,60;UBERON:0000490,9.72e-09,148;UBERON:0002049,1.76e-08,78;UBERON:0007798,1.76e-08,78;UBERON:0000025,2.25e-08,192;UBERON:0000479,1.39e-07,773;UBERON:0004237,1.85e-07,10;UBERON:0004695,1.85e-07,10;UBERON:0002111,1.85e-07,10;UBERON:0004178,1.85e-07,10;UBERON:0009569,2.35e-07,112;UBERON:0005423,2.49e-07,581;UBERON:0002553,4.77e-07,61;UBERON:0002323,5.23e-07,46;UBERON:0003688,5.51e-07,6;UBERON:0002358,5.51e-07,6;UBERON:0003684,5.51e-07,6;UBERON:0001178,5.51e-07,6;UBERON:0000922,6.26e-07,592 | |||
|phase1_expression=1.63510541343501,0.856402095563933,370.005310751924,130.09528785907,248.510368501572,40.9999106327173,0,0,1.04474251279935,23.0989900311418,10.4670175195864,0,0.263766978228454,8.78741106016331,13.2558950291166,7.39557661096953,7.23233433628772,5.11217063271161,5.85519358548608,1.35433163884467,6.32402142857184,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,112.151158504422,203.222360490202,58.8167784480239,0.361439152384566,0.50133791063589,0.289693037921647,0,0.486634870302636,0.567208902984407,2.66075276955077,0.966182642624386,57.6962827567424,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,3.54565432660823,32.5726584800518,18.6443803486729,10.6400514659507,12.3349072031308,17.0798393167528,7.15335890409764,51.972242911761,13.4710672069688,62.1155231831143,29.3633409631167,12.67587033856,190.971966944544,21.2268852244618,5.70471821544449,2.24173020827702,0,0,0,3.67477508258808,24.6896977796654,5.16628905878827,64.1521542932309,29.1774976548697,39.1369385633351,56.7708332034828,0.336672227908132,0.750711119231785,2.49357703935765,2.19488810440419,0.30648779579902,118.838304595118,22.0058435330441,4.48474089222155,5.55249210928275,0.635795703478686,4.20127534518163,7.4197821051676,76.0039593134606,69.7938211243462,7.76371128309825,17.3437869186934,7.06814567883521,8.19244097916464,29.257936284205,0.355009592516614,0.403008392910561,18.9907863387746,0,0,0,0,0.132529768321485,4.99633954338929,0.518305275076852,0.504641701751257,0,0,0.643240938192885,4.14404764057442,28.3264436099507,10.8281922250438,0,0,0,0,0,0,0,0,0,0,18.231430594448,10.7009242946164,8.82052268313252,0,0.982827216677626,17.1329072937607,0,0,6.17644117074692,0,0,0,0,508.260956284107,46.797065337581,0,0.115930404975077,1.76113041353732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,3.93686944611448,0,0,0,0.205654985406647,0,0,0.336393253036082,0,0.36669142910475,10.2124655448644,0,0.845302752556,2.6593811658487,1.04007436911366,4.62973273671856,11.3479305618623,8.52550972851518,71.7749528163901,36.8982691666181,37.8690554919154,1.30294473717494,68.5906461073113,38.0136899008046,0,5.22920075160176,1.69954085009497,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,5.76650011079957,0.500170521059677,11.6643960190886,0,0,0,0,21.0662269809403,4.5481500811197,4.1389228517002,3.32112799267718,6.26855173041791,3.64911180765948,11.356467132839,2.74514739048685,0,0,0,0,1.66435439510497,0.907170879989041,0,0.767309866440312,0.280660094433074,172.987851495196,57.3112118954708,64.341568457443,29.6836132889982,0.462629081407967,0,0.164254312027618,20.2509227381612,0.348631135379878,0,0,0,128.247738599866,74.657378882754,318.89457718132,3.60959690325929,1.77135275340154,45.4922866122576,5.84556898613043,0.73886140225013,1.13733384070897,0,2.15915916102139,4.62681758070868,67.1947165108755,35.1182841698397,2.29388645740534,21.6079762321468,5.37299411333228,0,0,2.3080511260475,7.54433685109323,0,136.838463468175,0,0,0,0,49.8120182516895,0.193341436584244,0.616194468458578,0.460511024178389,0.689182862422653,0.644521469209642,1.0151168573996,1.53407929348982,0.0890320356467374,0,0,0,0.10115778085555,70.6565234931874,79.0178990544907,43.2163107499572,121.365230589379,18.0984050307787,53.9358455086545,0,0.429374660225974,10.048275972711,26.575871676373,9.72213989011507,325.501990548017,262.754538652827,0.636406495851874,0,450.760378703787,256.417585773475,244.342922464954,17.3876934153052,82.4253670099643,51.3935316611557,704.630752984458,0.731140468893853,0,74.2559518059442,281.113998723981,15.821136326834,1.10273068709225,0,97.3360965263353,159.742047457606,212.509899663109,6.29022168584383,5.5768229657955,18.0285185620635,11.7597308807322,6.87743287091848,5.35006577221875,10.6428319221179,0.633322905892992,0,102.078283742977,107.779893835455,0,0,0,142.157139172937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,5.37969568277888,45.3105621471082,0,0,0,1.24415835064723,0,0,0,69.1490273514905,0,0,0.969332746095218,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0,48.8634141499111,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,70.6635971065738,60.8588043782974,77.6008284065704,0,0,0,2.29163852134302,4.01288823649394,0,0,0,0,35.5125962564451,99.2123871599044,0.61214552326098,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0,0,0,35.8189669896162,0,0,0,0,67.8923115418936,0,0,0,0,0.0633107959558787,0,0,54.8574196480136,0,0,0,0,0,1.24252535565433,0,0,0,0,0,0,0,0,0,0,120.091432547069,49.0403307385003,99.7843504161771,14.7762460369253,22.7489805512383,41.2867196267464,155.798472696718,11.1692963898145,0,0,0,0,8.76004585481264,0,0,0,0.321506296930038,0.825236619583403,0.415440338029185,0,0,0.0607495566580247,0,57.6857777430131,525.385154760141,0,0,0,26.4437270758146,22.5111269924247,0,0,0,0,0,0,28.4547996381654,0.113312091520126,12.8965965636713,10.6005511129777,0.258565912723101,0,0,0,341.612932804055,916.029485815753,172.323447024433,4.46549419630756,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,8.027728739661,2.44043913381075,3.91207338530716,0,0,0,0,0,0,0,0,0,3.32883516901568,0,0.251567901752575,0,92.909067769151,30.6998775239375,28.1341333054833,66.9783829453042,8.76132219400363,18.8917307108714,9.78156628320434,63.4500497996509,7.44356800762386,1.5652351854352,1.20206087197775,4.95046775819434,4.06870733204662,9.81982759693821,2.68526392606221,12.5289115167193,4.77715066438339,0,0.343395705182793,0.336749488765919,17.6658857520111,0,0,0,0,0,0,0,0,5.70138528904638,3.18040462702586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,31.7408349321616,310.226668558792,2.50493977876192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,214.800697765479,0,3.12605604493237,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0.548257766857182,14.8863353516788,0,0,1.60710550763486,0.336283722218824,3.64179362541979,5.00856820972855,155.317850154781,0,0,0,0,0,0,215.38504678181,0,0,156.150141207124,0,0,0.357382720883282,0,0,0,314.270854974259,0,0,0,0.860454717640555,0.591660003652827,0.852134047591577,58.4274129263482,0,0,0,0,0,0,0.647428837187895,3.59319823996865,0,3.39997695141398,0,0,0,0,0,0,48.0023263431416,133.758451028422,0,74.0347931696795,0,0.392616934229891,0,0.4226557275834,0.509781344063451,181.388961701117,473.636560829845,0,0,0,0,51.1235471772562,0,0,0,0.611923411718232,0,118.50201227545,1.85997509083376,0.462175628631418,1.73050624849516,0,0,0,0.203977659483963,0,0,0.250707539292375,29.7052497015498,10.7185652062471,0,0,3.62497769231668,6.90386851244847,0.0645889098360061,5.27635071514792,0,2.16400338145761,1.61693751166575,0.217716747896961,0.342233301085281,0,23.2379945472271,22.2882438885829,0,0,38.614456457388,0,21.1176848163109,50.4857164475238,37.8413445833637,92.5401916117863,4.83057104618463,0 | |||
|short_description=p1@TCF21 | |||
}} |
Latest revision as of 20:53, 24 September 2015
Short description: | p1@TCF21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCF21_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_NM_198392, uc003qei.3, uc003qej.2_5end |
EntrezGene: | TCF21 |
HGNC: | 11632 |
UniProt: | O43680 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.42e-18 | 43 |
smooth muscle myoblast | 1.42e-18 | 43 |
muscle cell | 1.01e-16 | 55 |
muscle precursor cell | 4.16e-15 | 58 |
myoblast | 4.16e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.16e-15 | 58 |
fibroblast | 1.83e-14 | 76 |
electrically responsive cell | 1.13e-13 | 61 |
electrically active cell | 1.13e-13 | 61 |
cardiocyte | 1.77e-12 | 16 |
vascular associated smooth muscle cell | 7.06e-10 | 32 |
aortic smooth muscle cell | 1.85e-07 | 10 |
mesodermal cell | 7.57e-07 | 121 |