FFCP PHASE1:Hg19::chr16:15951157..15951166,-: Difference between revisions
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|id=chr16:15951157..15951166,-
|short_description=p18@MYH11
|description=CAGE_peak_18_at_MYH11_5end
|association_with_transcript=-267bp_to_ENST00000300036,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=P35749,Q3MIV8 | |UniProt=P35749,Q3MIV8 | ||
|association_with_transcript=-267bp_to_ENST00000300036,ENST00000338282_5end | |||
|cluster_id=chr16:15951157..15951166,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_18_at_MYH11_5end | |||
|id=chr16:15951157..15951166,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;1.05e-10;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.08e-11;1!UBERON:0004874;4.80e-11;1!UBERON:0009143;1.05e-10;1!UBERON:0005754;1.05e-10;1!UBERON:0005425;1.05e-10;1!UBERON:0006603;5.06e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.03e-43!115;UBERON:0006947!1.78e-11!3;UBERON:0004054!1.78e-11!3;UBERON:0003135!2.74e-11!11;UBERON:0005904!1.05e-08!4;UBERON:0002360!2.07e-07!2;UBERON:0000094!2.07e-07!2;UBERON:0007645!2.07e-07!2;UBERON:0003101!3.97e-07!22;UBERON:0000079!3.97e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;4.46e-14;11!UBERON:0006947;1.16e-13;3!UBERON:0004054;1.16e-13;3!UBERON:0006834;4.80e-11;1!UBERON:0001000;4.80e-11;1!UBERON:0000989;4.80e-11;1!UBERON:0008811;4.80e-11;1!UBERON:0005352;4.80e-11;1!UBERON:0003101;9.08e-11;22!UBERON:0000079;9.08e-11;22!UBERON:0000998;1.05e-10;1!UBERON:0002146;1.05e-10;1!UBERON:0000941;1.05e-10;1!UBERON:0001785;1.05e-10;1!UBERON:0002464;1.05e-10;1!UBERON:0004904;1.05e-10;1!UBERON:0006868;1.05e-10;1!UBERON:0001021;1.05e-10;1!UBERON:0005623;1.05e-10;1!UBERON:0005904;1.78e-10;4!UBERON:0004175;1.85e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.36e-19,114;UBERON:0003135,4.62e-14,11;UBERON:0006947,9.60e-14,3;UBERON:0004054,9.60e-14,3;UBERON:0000989,4.15e-11,1;UBERON:0008811,4.15e-11,1;UBERON:0006258,4.15e-11,1;UBERON:0005876,4.15e-11,1;UBERON:0004874,4.15e-11,1;UBERON:0001000,4.58e-11,1;UBERON:0005352,4.58e-11,1;UBERON:0006834,5.05e-11,1;UBERON:0000998,8.22e-11,1;UBERON:0006868,8.22e-11,1;UBERON:0003101,9.28e-11,22;UBERON:0000079,9.28e-11,22;UBERON:0000941,1.10e-10,1;UBERON:0001785,1.10e-10,1;UBERON:0002464,1.10e-10,1;UBERON:0004904,1.10e-10,1;UBERON:0001021,1.10e-10,1;UBERON:0003902,1.10e-10,1;UBERON:0005425,1.10e-10,1;UBERON:0002146,1.33e-10,1;UBERON:0005623,1.33e-10,1;UBERON:0005904,1.54e-10,4;UBERON:0005156,2.15e-09,59;UBERON:0000990,2.15e-09,59;UBERON:0003133,4.97e-09,48 | |||
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| ||
|short_description=p18@MYH11 | |||
}} | }} |
Latest revision as of 21:11, 24 September 2015
Short description: | p18@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -267bp_to_ENST00000300036, ENST00000338282_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | P35749Q3MIV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.36e-19 | 114 |
male reproductive organ | 4.62e-14 | 11 |
male genital duct | 9.60e-14 | 3 |
internal male genitalia | 9.60e-14 | 3 |
penis | 4.15e-11 | 1 |
intromittent organ | 4.15e-11 | 1 |
lateral plate mesenchyme | 4.15e-11 | 1 |
undifferentiated genital tubercle | 4.15e-11 | 1 |
somatopleure | 4.15e-11 | 1 |
vas deferens | 4.58e-11 | 1 |
spermatic cord | 4.58e-11 | 1 |
uterus or analog | 5.05e-11 | 1 |
seminal vesicle | 8.22e-11 | 1 |
seminal fluid secreting gland | 8.22e-11 | 1 |
male organism | 9.28e-11 | 22 |
male reproductive system | 9.28e-11 | 22 |
cranial nerve II | 1.10e-10 | 1 |
cranial nerve | 1.10e-10 | 1 |
nerve trunk | 1.10e-10 | 1 |
nerve connecting eye with brain | 1.10e-10 | 1 |
nerve | 1.10e-10 | 1 |
retinal neural layer | 1.10e-10 | 1 |
presumptive neural retina | 1.10e-10 | 1 |
pulmonary valve | 1.33e-10 | 1 |
semi-lunar valve | 1.33e-10 | 1 |
duct of male reproductive system | 1.54e-10 | 4 |
reproductive structure | 2.15e-09 | 59 |
reproductive system | 2.15e-09 | 59 |
reproductive organ | 4.97e-09 | 48 |