FFCP PHASE1:Hg19::chr11:105480958..105480979,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:105480958..105480979,+ to FFCP PHASE1:Hg19::chr11:105480958..105480979,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2893 | |EntrezGene=2893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4574 | |HGNC=4574 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJZ5 | |UniProt=E9PJZ5 | ||
|association_with_transcript=-13bp_to_ENST00000525921_5end | |||
|cluster_id=chr11:105480958..105480979,+ | |||
|coexpression_cluster_id=C1328 | |||
|description=CAGE_peak_7_at_GRIA4_5end | |||
|id=chr11:105480958..105480979,+ | |||
|ontology_enrichment_celltype=CL:0000064!2.39e-07!3;CL:0005012!2.39e-07!3;CL:0000067!2.39e-07!3;CL:0002304!2.39e-07!3;CL:0000047!2.48e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.76e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.81e-25;3!UBERON:0006601;1.72e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.95e-10;1!DOID:4549;7.95e-10;1!DOID:5861;7.95e-10;1!DOID:6496;7.95e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.98e-10,1;DOID:4549,7.98e-10,1;DOID:5861,7.98e-10,1;DOID:6496,7.98e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004733;7.34e-32;12!UBERON:0002028;7.34e-32;12!UBERON:0004732;2.32e-29;13!UBERON:0002680;3.42e-22;9!UBERON:0001895;3.42e-22;9!UBERON:0002298;2.08e-21;6!UBERON:0001017;2.17e-20;75!UBERON:0000955;8.07e-19;68!UBERON:0000073;9.48e-19;53!UBERON:0002616;9.48e-19;53!UBERON:0001869;1.95e-16;32!UBERON:0001893;4.41e-16;34!UBERON:0001016;3.16e-15;83!UBERON:0003528;1.14e-13;34!UBERON:0002020;1.14e-13;34!UBERON:0002791;1.83e-13;32!UBERON:0001950;3.61e-13;20!UBERON:0002037;9.50e-13;6!UBERON:0002619;5.52e-12;22!UBERON:0005383;7.28e-12;3!UBERON:0005382;7.28e-12;3!UBERON:0000988;1.43e-11;3!UBERON:0001896;1.43e-11;3!UBERON:0005290;1.43e-11;3!UBERON:0000956;1.51e-10;25!UBERON:0000203;1.51e-10;25!UBERON:0001874;9.41e-10;1!UBERON:0002780;1.58e-09;41!UBERON:0001890;1.58e-09;41!UBERON:0002022;2.65e-09;1!UBERON:0007190;2.65e-09;1!UBERON:0000369;4.07e-09;4!UBERON:0002435;4.07e-09;4!UBERON:0000204;4.07e-09;4!UBERON:0000125;1.18e-08;9!UBERON:0002308;1.18e-08;9!UBERON:0007023;2.28e-07;114!UBERON:0002021;2.76e-07;5!UBERON:0000013;2.76e-07;5!UBERON:0002410;2.76e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.67e-42,89;UBERON:0001017,8.53e-39,81;UBERON:0000073,6.62e-35,53;UBERON:0002616,6.62e-35,53;UBERON:0000955,1.06e-33,68;UBERON:0006238,1.06e-33,68;UBERON:0001049,6.38e-33,56;UBERON:0005068,6.38e-33,56;UBERON:0006241,6.38e-33,56;UBERON:0007135,6.38e-33,56;UBERON:0004733,1.23e-31,12;UBERON:0002028,1.23e-31,12;UBERON:0007277,1.23e-31,12;UBERON:0004732,3.75e-29,13;UBERON:0003076,3.54e-25,15;UBERON:0003057,3.54e-25,15;UBERON:0002680,3.29e-22,9;UBERON:0001895,3.29e-22,9;UBERON:0010092,3.29e-22,9;UBERON:0003075,1.00e-21,82;UBERON:0007284,1.00e-21,82;UBERON:0002298,2.72e-21,6;UBERON:0002346,1.35e-20,86;UBERON:0004121,1.37e-20,171;UBERON:0000924,1.37e-20,171;UBERON:0006601,1.37e-20,171;UBERON:0007023,1.73e-19,114;UBERON:0001869,2.27e-18,32;UBERON:0003528,2.63e-17,34;UBERON:0002020,2.63e-17,34;UBERON:0001893,3.02e-17,34;UBERON:0010371,1.43e-16,104;UBERON:0011216,6.60e-15,223;UBERON:0002791,1.46e-14,32;UBERON:0002780,3.75e-14,41;UBERON:0001890,3.75e-14,41;UBERON:0003080,3.75e-14,41;UBERON:0006240,3.75e-14,41;UBERON:0001950,2.78e-13,20;UBERON:0002037,1.21e-12,6;UBERON:0006215,1.21e-12,6;UBERON:0010314,1.78e-12,132;UBERON:0002619,4.36e-12,22;UBERON:0005383,6.04e-12,3;UBERON:0005382,6.04e-12,3;UBERON:0000988,9.83e-12,3;UBERON:0001896,2.71e-11,3;UBERON:0005290,2.71e-11,3;UBERON:0010096,2.71e-11,3;UBERON:0000956,1.23e-10,25;UBERON:0000203,1.23e-10,25;UBERON:0001874,9.44e-10,1;UBERON:0002022,1.43e-09,1;UBERON:0007190,3.00e-09,1;UBERON:0000369,3.54e-09,4;UBERON:0002435,3.54e-09,4;UBERON:0000204,3.54e-09,4;UBERON:0010082,3.54e-09,4;UBERON:0003056,3.69e-09,61;UBERON:0000125,9.31e-09,9;UBERON:0002308,9.31e-09,9;UBERON:0000025,1.07e-07,192;UBERON:0002021,2.14e-07,5;UBERON:0000013,2.36e-07,5;UBERON:0002410,2.36e-07,5 | |||
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|short_description=p7@GRIA4 | |||
}} | }} |
Latest revision as of 21:16, 24 September 2015
Short description: | p7@GRIA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GRIA4_5end |
Coexpression cluster: | C1328_extraskeletal_cerebellum_brain_duodenum_occipital_parietal_temporal |
Association with transcript: | -13bp_to_ENST00000525921_5end |
EntrezGene: | GRIA4 |
HGNC: | 4574 |
UniProt: | E9PJZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.98e-10 | 1 |
extraosseous chondrosarcoma | 7.98e-10 | 1 |
myxoid chondrosarcoma | 7.98e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 7.98e-10 | 1 |