FFCP PHASE1:Hg19::chr18:9102437..9102446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:9102437..9102446,- | |||
|coexpression_cluster_id=C399 | |coexpression_cluster_id=C399 | ||
|description=CAGE_peak_at_chr18:9102437..9102446,- | |description=CAGE_peak_at_chr18:9102437..9102446,- | ||
Latest revision as of 21:25, 24 September 2015
| Short description: | p@chr18:9102437..9102446, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr18:9102437..9102446, - |
| Coexpression cluster: | C399_CD19_Eosinophils_CD4_CD8_CD14_Basophils_Natural |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr18:9102437..9102446- |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 3.24e-34 | 42 |
| CD14-positive, CD16-negative classical monocyte | 3.24e-34 | 42 |
| leukocyte | 8.92e-33 | 136 |
| myeloid leukocyte | 7.60e-30 | 72 |
| defensive cell | 3.71e-29 | 48 |
| phagocyte | 3.71e-29 | 48 |
| hematopoietic stem cell | 5.69e-26 | 168 |
| nongranular leukocyte | 1.55e-24 | 115 |
| hematopoietic cell | 4.21e-24 | 177 |
| macrophage dendritic cell progenitor | 2.95e-23 | 61 |
Showing 1 to 10 of 34 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.72e-19 | 98 |
| blood island | 2.72e-19 | 98 |
| bone marrow | 3.28e-19 | 76 |
| bone element | 2.37e-17 | 82 |
| hemolymphoid system | 7.78e-17 | 108 |
| skeletal element | 1.06e-16 | 90 |
| immune system | 4.72e-16 | 93 |
| skeletal system | 2.16e-14 | 100 |
| connective tissue | 9.90e-08 | 371 |
| lateral plate mesoderm | 1.00e-07 | 203 |
Showing 1 to 10 of 11 entries
