FFCP PHASE1:Hg19::chr14:61748025..61748074,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161291 | |EntrezGene=161291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27254 | |HGNC=27254 | ||
|TSSclassifier=strong | |||
|UniProt=Q3MIR4 | |UniProt=Q3MIR4 | ||
|association_with_transcript=-66bp_to_ENST00000355702_5end | |association_with_transcript=-66bp_to_ENST00000355702_5end | ||
|cluster_id=chr14:61748025..61748074,- | |||
|coexpression_cluster_id=C1727 | |||
|description=CAGE_peak_1_at_TMEM30B_5end | |description=CAGE_peak_1_at_TMEM30B_5end | ||
|id=chr14:61748025..61748074,- | |id=chr14:61748025..61748074,- | ||
|ontology_enrichment_celltype=CL:0002076!2.97e-16!43;CL:0000066!2.01e-15!254;CL:0000223!1.96e-11!59;CL:0002368!1.23e-08!13;CL:0002251!1.07e-07!21 | |ontology_enrichment_celltype=CL:0002076!2.97e-16!43;CL:0000066!2.01e-15!254;CL:0000223!1.96e-11!59;CL:0002368!1.23e-08!13;CL:0002251!1.07e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.78e-15;42!CL:0002368;2.03e-10;13!CL:0002251;2.48e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.43e-19,42;CL:0000066,1.33e-16,253;CL:0000223,1.61e-13,58;CL:0002368,2.37e-10,13;CL:0002251,2.52e-08,20 | |||
|ontology_enrichment_development_v019=CL:0000223;8.96e-08;58!UBERON:0006595;9.04e-08;86 | |||
|ontology_enrichment_disease=DOID:1749!2.20e-10!14;DOID:305!9.62e-10!106;DOID:299!6.28e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.69e-11;14!DOID:299;5.65e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.26e-11,106;DOID:1749,3.87e-11,14;DOID:299,5.65e-09,25;DOID:0050687,7.05e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.62e-21!169;UBERON:0000925!4.62e-21!169;UBERON:0006595!4.62e-21!169;UBERON:0001007!2.27e-15!155;UBERON:0001555!2.27e-15!155;UBERON:0007026!2.27e-15!155;UBERON:0004921!1.20e-13!129;UBERON:0004185!1.20e-13!129;UBERON:0001004!5.28e-12!72;UBERON:0000077!5.55e-12!130;UBERON:0005911!3.79e-11!82;UBERON:0000464!4.53e-10!104;UBERON:0000466!1.69e-09!126;UBERON:0005153!4.03e-09!37;UBERON:0000065!4.91e-09!53;UBERON:0005178!1.86e-08!34;UBERON:0002224!1.86e-08!34;UBERON:0000161!2.30e-08!35;UBERON:0005181!5.41e-08!35;UBERON:0007023!7.10e-08!115;UBERON:0001041!1.12e-07!98;UBERON:0005157!2.92e-07!51;UBERON:0005156!9.07e-07!59;UBERON:0000990!9.07e-07!59;UBERON:0005631!9.63e-07!14;UBERON:0000158!9.63e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.66e-10;33!UBERON:0005178;4.57e-09;34!UBERON:0002224;4.57e-09;34!UBERON:0005409;8.69e-09;22!UBERON:0005181;2.54e-08;35!UBERON:0002048;3.32e-08;22!UBERON:0000117;3.32e-08;22!UBERON:0000171;3.32e-08;22!UBERON:0000170;3.32e-08;22!UBERON:0005911;3.69e-08;36!UBERON:0004807;4.67e-08;22!UBERON:0001555;1.39e-07;54!UBERON:0000160;2.30e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.83e-27,160;UBERON:0000925,6.83e-27,160;UBERON:0006595,6.83e-27,160;UBERON:0001007,1.90e-20,145;UBERON:0001555,1.90e-20,145;UBERON:0007026,1.90e-20,145;UBERON:0004921,8.13e-18,118;UBERON:0005911,6.26e-14,82;UBERON:0001004,4.51e-13,74;UBERON:0005153,3.44e-11,37;UBERON:0000065,1.23e-10,54;UBERON:0005178,3.03e-10,34;UBERON:0002224,3.03e-10,34;UBERON:0001041,5.66e-10,87;UBERON:0005181,9.38e-10,35;UBERON:0005157,4.77e-09,47;UBERON:0000915,1.83e-08,52;UBERON:0000161,3.24e-08,36;UBERON:0002048,3.31e-08,22;UBERON:0000117,3.31e-08,22;UBERON:0000171,3.31e-08,22;UBERON:0000170,3.31e-08,22;UBERON:0005597,3.31e-08,22;UBERON:0000118,3.31e-08,22;UBERON:0005631,3.85e-08,14;UBERON:0000158,3.85e-08,14;UBERON:0005156,6.60e-08,59;UBERON:0000990,6.60e-08,59;UBERON:0004807,1.03e-07,28;UBERON:0004175,1.54e-07,25;UBERON:0001008,1.79e-07,48;UBERON:0000160,2.34e-07,17;UBERON:0005409,3.21e-07,25;UBERON:0006554,4.84e-07,47;UBERON:0005177,5.36e-07,101;UBERON:0003133,6.79e-07,48;UBERON:0000974,8.87e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,9.09215565055583,13.9560233594486,10.4851858622483,9.23184423799587,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.928896739896456,8.27479102031034,9.0361775633475,13.3111443660044,0,0,0,0,0,1.51907609501096,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,6.29471264364266,5.10913991573914,2.67281948699362,0,2.28145586643513,2.36723902867367,5.84480185223734,0,0.883817722424512,0.443067789167242,0.270803863765016,0.25618263945135,0,0.164437904603676,0,0,4.44859689486181,2.94294910898684,6.27213142829861,0,1.53288197440768,2.06176467289578,2.27717722817553,1.27426165729639,0,0.950452044448374,1.95747654801105,2.43174561193395,0,1.18388626022008,0,2.01606743224732,0.802320587350522,5.35850294366356,2.43806866313962,0,0,0,0,0,0,0,0,0,0,2.88153966094968,16.3932879731644,10.381964397964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,27.9100193371222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7215205745941,7.36414525595254,12.3325976017272,0.487894824518382,1.19276791489337,0.580969714347592,1.0366105501537,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,15.4965432564323,0,5.26801369961403,3.37205259772859,8.1428467653421,10.6476711932309,0,0,0,0,0,0,0,0,25.2865407346968,18.8866955660872,0,0,0,0.93733833986777,6.55130299975552,8.22295564005842,8.41850113406774,8.4283842169049,3.83382679165211,0,0,0.414656231081544,0,0.37872730027914,0.063497894292169,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,1.57624608161542,2.80315847317372,1.02674429023799,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.94142780736755,1.38745825144478,3.94065842880137,1.66435439510497,3.62868351995616,0,0,0,0,0,0,0,0,0,0,0,0,8.46016147141356,16.2410240945661,22.0994373446151,0,0,0,4.06079651616671,3.77375151811632,0,1.46139224653261,0.949964660035881,0,0,0,0,0,0.501689773854853,5.3524017339458,13.2972161428596,0.223874754722178,0,0,0,0,0,7.93415789687461,0,0,2.87132768998086,4.55042172225565,0,0,0,0,0,0,0,0,0,18.6771954357905,21.1409074101617,9.18811529961006,37.6306944782646,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,11.0655429634339,7.37332503089366,5.44454924306613,7.249072659812,16.3592041615067,20.2165770801151,21.2846473697604,14.7022976132454,0,0.764637207142375,0.569647187174163,0.476463550915578,0.822724546172388,0,0,0,0,0,9.3115282072792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.6325026824576,0,0,0,0,25.7844043516705,7.42411702081597,27.6444631889309,0,0,0,0,0.211125408127993,3.38721580026819,8.84108529699673,8.56571342704538,0,0,0.311039587661807,17.9736702294654,27.927303249395,0,7.79282904531776,0,0,0,0.185536196323703,0,21.6155041700744,28.5119599987598,6.52499617891314,18.5483320705364,26.4423796304477,16.7835254055235,0,0,0,2.65722415744152,0.482385754501632,0,0,0,0.658156191461918,0,14.3606456606961,4.77091602723542,0,2.76676685265672,0,10.2128529606688,12.1220440698129,4.21348929648567,8.52855641629816,0,0,0,0,0,0,0,0,0,16.1600480077556,7.20900664313098,0,41.8010011052972,32.6408413017322,59.8809542034953,0,0,0,0.134802265961354,0,0,0,15.8488341334993,0,21.3075577538671,27.8278646911927,0,0.379119477770928,0,0,0,0,0,0,2.56148591426813,0,10.4135843001079,20.3824186621905,10.3600455830679,13.4539534546363,2.57979048707425,0,0,0,12.2206160775408,0,2.25980740780532,0,0,0,10.1686719022098,6.01191151886503,35.4331971267325,0,26.2244559220473,0,0.171594997861965,0,0,24.0407915309131,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,17.3720730434122,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.964518890790115,1.37539436597234,0.415440338029185,0.2249738915515,1.5476039091159,0.0607495566580247,6.70869375198532,8.5898220956126,5.4552771660398,0,0,11.7068270364862,0,0,0,0,0,0,0,0,0,0,2.93104467356165,5.30027555648885,0,0,0,28.1926008926669,12.600914682988,11.4759142722756,16.5695622138878,1.48849806543585,0,0.243585196761792,10.8518013820931,0,0,0,0,8.48092119751265,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,21.9764608292972,0,0,0,0,0,15.2468663414194,18.0402405409562,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0.449604575675217,0,0,0.205116364240755,0,0,0,0,9.91291956860359,11.0891539946876,16.3251452684294,16.404644593348,0,0,0,1.20336525358812,0,24.2269343482259,0,0,26.0226711742,0,0,0,0,0,21.3820529074301,4.46590060550365,0,16.2258283102286,0,0,23.6716585652286,10.7001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| ||
|short_description=p1@TMEM30B | |short_description=p1@TMEM30B | ||
}} | }} |
Latest revision as of 21:30, 24 September 2015
Short description: | p1@TMEM30B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM30B_5end |
Coexpression cluster: | C1727_colon_small_stomach_papillotubular_breast_duodenum_prostate |
Association with transcript: | -66bp_to_ENST00000355702_5end |
EntrezGene: | TMEM30B |
HGNC: | 27254 |
UniProt: | Q3MIR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.43e-19 | 42 |
epithelial cell | 1.33e-16 | 253 |
endodermal cell | 1.61e-13 | 58 |
respiratory epithelial cell | 2.37e-10 | 13 |
epithelial cell of alimentary canal | 2.52e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.26e-11 | 106 |
squamous cell carcinoma | 3.87e-11 | 14 |
adenocarcinoma | 5.65e-09 | 25 |
cell type cancer | 7.05e-07 | 143 |