FFCP PHASE1:Hg19::chrX:33229509..33229522,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000463609_5end | |association_with_transcript=26bp_to_ENST00000463609_5end | ||
|cluster_id=chrX:33229509..33229522,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_15_at_DMD_5end | |description=CAGE_peak_15_at_DMD_5end | ||
|id=chrX:33229509..33229522,- | |id=chrX:33229509..33229522,- | ||
|ontology_enrichment_celltype=CL:0000136!7.98e-08!15 | |ontology_enrichment_celltype=CL:0000136!7.98e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0002581;1.13e-08;1!CL:0002616;1.13e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,7.18e-09,1;CL:0002581,1.05e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.46e-17;4!UBERON:0007284;4.46e-17;4!UBERON:0000358;4.18e-09;1!UBERON:0010227;4.18e-09;1!UBERON:0004874;4.18e-09;1!UBERON:0010226;1.13e-08;1!UBERON:0006603;2.88e-08;65!UBERON:0003104;7.75e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.06e-09;1!DOID:4549;3.06e-09;1!DOID:5861;3.06e-09;1!DOID:6496;3.06e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.06e-09,1;DOID:4549,3.06e-09,1;DOID:5861,3.06e-09,1;DOID:6496,3.06e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-16!115;UBERON:0004151!1.57e-07!3;UBERON:0003978!1.82e-07!3;UBERON:0009751!1.82e-07!3;UBERON:0000946!1.82e-07!3;UBERON:0002523!1.82e-07!3;UBERON:0005983!1.82e-07!3;UBERON:0002165!1.82e-07!3;UBERON:0002062!1.82e-07!3;UBERON:0007280!1.82e-07!3;UBERON:0007100!3.60e-07!27;UBERON:0002385!4.23e-07!63;UBERON:0001015!4.23e-07!63;UBERON:0000383!4.23e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;5.60e-23;3!UBERON:0003978;1.48e-22;3!UBERON:0000946;1.48e-22;3!UBERON:0002081;4.63e-16;2!UBERON:0005090;1.23e-15;2!UBERON:0001630;1.23e-15;2!UBERON:0002133;1.23e-15;2!UBERON:0005406;1.23e-15;2!UBERON:0007100;1.14e-13;25!UBERON:0001134;2.62e-11;16!UBERON:0002036;2.62e-11;16!UBERON:0001723;5.14e-11;3!UBERON:0001033;5.14e-11;3!UBERON:0002079;4.18e-09;1!UBERON:0006834;4.18e-09;1!UBERON:0000989;4.18e-09;1!UBERON:0008811;4.18e-09;1!UBERON:0002084;1.13e-08;1!UBERON:0002135;1.13e-08;1!UBERON:0002146;1.13e-08;1!UBERON:0002134;1.13e-08;1!UBERON:0001389;1.13e-08;1!UBERON:0000026;1.13e-08;1!UBERON:0008784;1.13e-08;1!UBERON:0006058;1.13e-08;1!UBERON:0002426;1.13e-08;1!UBERON:0003831;1.13e-08;1!UBERON:0003898;1.13e-08;1!UBERON:0004830;1.13e-08;1!UBERON:0003663;1.13e-08;1!UBERON:0004256;1.13e-08;1!UBERON:0002082;1.13e-08;1!UBERON:0004708;1.13e-08;1!UBERON:0002101;1.13e-08;1!UBERON:0004709;1.13e-08;1!UBERON:0005208;1.13e-08;1!UBERON:0005623;1.13e-08;1!UBERON:0003830;1.13e-08;1!UBERON:0005175;1.13e-08;1!UBERON:0002529;1.13e-08;1!UBERON:0010538;1.13e-08;1!UBERON:0003661;1.13e-08;1!UBERON:0010890;1.13e-08;1!UBERON:0002471;1.13e-08;1!UBERON:0001774;1.13e-08;1!UBERON:0001383;1.13e-08;1!UBERON:0004145;1.13e-08;1!UBERON:0005946;1.13e-08;1!UBERON:0010758;1.13e-08;1!UBERON:0010707;1.13e-08;1!UBERON:0001103;1.13e-08;1!UBERON:0000978;1.13e-08;1!UBERON:0002103;1.13e-08;1!UBERON:0001665;1.13e-08;1!UBERON:0003823;1.13e-08;1!UBERON:0000154;1.13e-08;1!UBERON:0010709;1.13e-08;1!UBERON:0005965;1.13e-08;1!UBERON:0002078;1.13e-08;1!UBERON:0000948;2.90e-08;22!UBERON:0010313;3.88e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,8.19e-23,3;UBERON:0003978,1.38e-22,3;UBERON:0009751,1.38e-22,3;UBERON:0000946,1.38e-22,3;UBERON:0002523,1.38e-22,3;UBERON:0005983,1.38e-22,3;UBERON:0002165,1.38e-22,3;UBERON:0002062,1.38e-22,3;UBERON:0007280,1.38e-22,3;UBERON:0005090,5.02e-16,2;UBERON:0001630,5.02e-16,2;UBERON:0002081,5.41e-16,2;UBERON:0010227,5.41e-16,2;UBERON:0005406,7.31e-16,2;UBERON:0002133,1.33e-15,2;UBERON:0007100,1.55e-12,27;UBERON:0007023,8.75e-12,114;UBERON:0001723,5.98e-11,3;UBERON:0001033,5.98e-11,3;UBERON:0010056,5.98e-11,3;UBERON:0004797,5.24e-10,7;UBERON:0000989,3.31e-09,1;UBERON:0008811,3.31e-09,1;UBERON:0006258,3.31e-09,1;UBERON:0005876,3.31e-09,1;UBERON:0004874,3.31e-09,1;UBERON:0003103,3.62e-09,68;UBERON:0002079,4.89e-09,1;UBERON:0006834,5.28e-09,1;UBERON:0005418,5.70e-09,1;UBERON:0001389,5.70e-09,1;UBERON:0000026,5.70e-09,1;UBERON:0008784,5.70e-09,1;UBERON:0006058,5.70e-09,1;UBERON:0003663,5.70e-09,1;UBERON:0004256,5.70e-09,1;UBERON:0004708,5.70e-09,1;UBERON:0002101,5.70e-09,1;UBERON:0004709,5.70e-09,1;UBERON:0002529,5.70e-09,1;UBERON:0010538,5.70e-09,1;UBERON:0003661,5.70e-09,1;UBERON:0010890,5.70e-09,1;UBERON:0002471,5.70e-09,1;UBERON:0001383,5.70e-09,1;UBERON:0004357,5.70e-09,1;UBERON:0004347,5.70e-09,1;UBERON:0005420,5.70e-09,1;UBERON:0005732,5.70e-09,1;UBERON:0010758,5.70e-09,1;UBERON:0010707,5.70e-09,1;UBERON:0000978,5.70e-09,1;UBERON:0002103,5.70e-09,1;UBERON:0001665,5.70e-09,1;UBERON:0003823,5.70e-09,1;UBERON:0000154,5.70e-09,1;UBERON:0010709,5.70e-09,1;UBERON:0005733,5.70e-09,1;UBERON:0005730,5.70e-09,1;UBERON:0002426,9.02e-09,1;UBERON:0003831,9.02e-09,1;UBERON:0003898,9.02e-09,1;UBERON:0004830,9.02e-09,1;UBERON:0003830,9.02e-09,1;UBERON:0005175,9.02e-09,1;UBERON:0001774,9.02e-09,1;UBERON:0001103,9.02e-09,1;UBERON:0010084,9.02e-09,1;UBERON:0002146,9.74e-09,1;UBERON:0005623,9.74e-09,1;UBERON:0002134,1.13e-08,1;UBERON:0005208,1.13e-08,1;UBERON:0005946,1.13e-08,1;UBERON:0005965,1.13e-08,1;UBERON:0002078,1.13e-08,1;UBERON:0002135,1.22e-08,1;UBERON:0002084,1.42e-08,1;UBERON:0002082,1.42e-08,1;UBERON:0010226,1.42e-08,1;UBERON:0000948,1.56e-07,24;UBERON:0005498,1.56e-07,24;UBERON:0004140,1.56e-07,24;UBERON:0009881,1.56e-07,24;UBERON:0004141,1.56e-07,24;UBERON:0003084,1.56e-07,24;UBERON:0007005,1.56e-07,24;UBERON:0004139,1.56e-07,24;UBERON:0004291,1.56e-07,24;UBERON:0010313,3.80e-07,10;UBERON:0002342,3.80e-07,10;UBERON:0005062,3.80e-07,10 | |||
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|short_description=p15@DMD | |short_description=p15@DMD | ||
}} | }} |
Latest revision as of 21:59, 24 September 2015
Short description: | p15@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_DMD_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 26bp_to_ENST00000463609_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 7.18e-09 | 1 |
perirenal preadipocyte | 1.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.06e-09 | 1 |
extraosseous chondrosarcoma | 3.06e-09 | 1 |
myxoid chondrosarcoma | 3.06e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 3.06e-09 | 1 |