FFCP PHASE1:Hg19::chr18:9649081..9649088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:9649081..9649088,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_at_chr18:9649081..9649088,+ | |description=CAGE_peak_at_chr18:9649081..9649088,+ | ||
|id=chr18:9649081..9649088,+ | |id=chr18:9649081..9649088,+ | ||
|ontology_enrichment_celltype=CL:0002166!7.29e-24!3;CL:0002621!1.82e-23!3;CL:0002159!2.93e-20!13;CL:0002368!6.80e-20!13;CL:0002076!6.42e-19!43;CL:0000244!1.55e-17!4;CL:0000731!1.55e-17!4;CL:0000223!7.21e-16!59;CL:0000575!1.15e-15!2;CL:0000066!1.09e-12!254;CL:0000068!6.29e-11!3;CL:0000069!6.29e-11!3;CL:0000307!6.29e-11!3;CL:0000377!6.29e-11!3;CL:0002077!2.56e-10!33;CL:0002251!8.79e-09!21;CL:0002336!1.22e-08!1;CL:0002261!1.22e-08!1;CL:0002170!1.22e-08!1;CL:0000220!3.06e-07!246;CL:0002321!3.73e-07!248 | |ontology_enrichment_celltype=CL:0002166!7.29e-24!3;CL:0002621!1.82e-23!3;CL:0002159!2.93e-20!13;CL:0002368!6.80e-20!13;CL:0002076!6.42e-19!43;CL:0000244!1.55e-17!4;CL:0000731!1.55e-17!4;CL:0000223!7.21e-16!59;CL:0000575!1.15e-15!2;CL:0000066!1.09e-12!254;CL:0000068!6.29e-11!3;CL:0000069!6.29e-11!3;CL:0000307!6.29e-11!3;CL:0000377!6.29e-11!3;CL:0002077!2.56e-10!33;CL:0002251!8.79e-09!21;CL:0002336!1.22e-08!1;CL:0002261!1.22e-08!1;CL:0002170!1.22e-08!1;CL:0000220!3.06e-07!246;CL:0002321!3.73e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002166;4.01e-74;3!CL:0002159;1.37e-16;14!CL:0001014;7.77e-14;2!CL:0001016;7.77e-14;2!CL:0000771;1.21e-13;2!CL:0002621;1.53e-09;3!CL:0000244;1.80e-07;4!CL:0000731;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.54e-74,3;CL:0002159,1.33e-16,14;CL:0001014,8.28e-14,2;CL:0001016,8.28e-14,2;CL:0000771,1.37e-13,2;CL:0002621,1.54e-09,3;CL:0000244,1.69e-07,4;CL:0000731,1.69e-07,4;CL:0002077,3.15e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.82e-23!3;UBERON:0001708!4.73e-18!4;UBERON:0001704!4.73e-18!4;UBERON:0000365!3.83e-14!5;UBERON:0002090!3.24e-12!6;UBERON:0005910!7.08e-12!6;UBERON:0001828!3.87e-09!8;UBERON:0000964!2.78e-08!4;UBERON:0004348!2.78e-08!4;UBERON:0005427!2.78e-08!4;UBERON:0004119!5.42e-07!169;UBERON:0000925!5.42e-07!169;UBERON:0006595!5.42e-07!169;UBERON:0001004!5.44e-07!72;UBERON:0003129!7.21e-07!11 | |ontology_enrichment_uberon=UBERON:0001949!1.82e-23!3;UBERON:0001708!4.73e-18!4;UBERON:0001704!4.73e-18!4;UBERON:0000365!3.83e-14!5;UBERON:0002090!3.24e-12!6;UBERON:0005910!7.08e-12!6;UBERON:0001828!3.87e-09!8;UBERON:0000964!2.78e-08!4;UBERON:0004348!2.78e-08!4;UBERON:0005427!2.78e-08!4;UBERON:0004119!5.42e-07!169;UBERON:0000925!5.42e-07!169;UBERON:0006595!5.42e-07!169;UBERON:0001004!5.44e-07!72;UBERON:0003129!7.21e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.33e-56;4!UBERON:0008895;7.33e-56;4!UBERON:0011159;6.82e-45;5!UBERON:0011137;6.76e-21;11!UBERON:0010323;6.76e-21;11!UBERON:0000075;1.30e-14;16!UBERON:0001949;1.53e-09;3!UBERON:0004765;2.95e-09;26!UBERON:0000486;3.41e-09;12!UBERON:0001434;6.26e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,6.68e-56,4;UBERON:0008895,6.68e-56,4;UBERON:0011159,6.33e-45,5;UBERON:0010188,1.34e-37,6;UBERON:0002539,1.34e-37,6;UBERON:0008816,1.34e-37,6;UBERON:0010323,6.54e-21,11;UBERON:0011137,1.33e-16,14;UBERON:0000075,1.27e-14,16;UBERON:0008814,4.45e-13,18;UBERON:0001949,1.54e-09,3;UBERON:0000033,1.70e-07,56;UBERON:0000153,8.39e-07,62;UBERON:0007811,8.39e-07,62 | |||
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|short_description=p@chr18:9649081..9649088,+ | |short_description=p@chr18:9649081..9649088,+ | ||
}} | }} |
Latest revision as of 22:22, 24 September 2015
Short description: | p@chr18:9649081..9649088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:9649081..9649088, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.54e-74 | 3 |
general ecto-epithelial cell | 1.33e-16 | 14 |
CD1a-positive Langerhans cell | 8.28e-14 | 2 |
immature CD1a-positive Langerhans cell | 8.28e-14 | 2 |
eosinophil | 1.37e-13 | 2 |
gingival epithelial cell | 1.54e-09 | 3 |
transitional epithelial cell | 1.69e-07 | 4 |
urothelial cell | 1.69e-07 | 4 |
ecto-epithelial cell | 3.15e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 6.68e-56 | 4 |
splanchnocranium | 6.68e-56 | 4 |
primary subdivision of cranial skeletal system | 6.33e-45 | 5 |
protuberance | 1.34e-37 | 6 |
pharyngeal arch | 1.34e-37 | 6 |
embryonic head | 1.34e-37 | 6 |
cranial skeletal system | 6.54e-21 | 11 |
axial skeletal system | 1.33e-16 | 14 |
subdivision of skeletal system | 1.27e-14 | 16 |
pharyngeal arch system | 4.45e-13 | 18 |
gingival epithelium | 1.54e-09 | 3 |
head | 1.70e-07 | 56 |
anterior region of body | 8.39e-07 | 62 |
craniocervical region | 8.39e-07 | 62 |