FFCP PHASE1:Hg19::chr12:78359680..78359686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89795 | |EntrezGene=89795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15998 | |HGNC=15998 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-369bp_to_ENST00000547725,ENST00000550503_5end | |association_with_transcript=-369bp_to_ENST00000547725,ENST00000550503_5end | ||
|cluster_id=chr12:78359680..78359686,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_32_at_NAV3_5end | |description=CAGE_peak_32_at_NAV3_5end | ||
|id=chr12:78359680..78359686,+ | |id=chr12:78359680..78359686,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0003056;3.27e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.52e-72!57;UBERON:0005068!1.52e-72!57;UBERON:0006241!1.52e-72!57;UBERON:0007135!1.52e-72!57;UBERON:0002616!1.22e-55!59;UBERON:0003075!1.51e-49!86;UBERON:0007284!1.51e-49!86;UBERON:0005743!6.54e-49!86;UBERON:0002780!2.78e-48!41;UBERON:0001890!2.78e-48!41;UBERON:0006240!2.78e-48!41;UBERON:0001017!3.95e-48!82;UBERON:0001893!1.28e-47!34;UBERON:0002020!3.31e-47!34;UBERON:0003528!3.31e-47!34;UBERON:0000073!4.30e-47!94;UBERON:0001016!4.30e-47!94;UBERON:0002346!4.38e-47!90;UBERON:0003080!4.76e-47!42;UBERON:0000955!4.21e-46!69;UBERON:0006238!4.21e-46!69;UBERON:0007023!3.96e-44!115;UBERON:0002791!5.11e-44!33;UBERON:0001869!5.78e-40!32;UBERON:0003056!2.56e-34!61;UBERON:0002298!1.39e-30!8;UBERON:0002619!8.33e-29!22;UBERON:0000033!9.07e-28!123;UBERON:0002308!1.57e-26!9;UBERON:0000125!1.57e-26!9;UBERON:0003076!2.61e-26!15;UBERON:0003057!2.61e-26!15;UBERON:0000153!3.28e-26!129;UBERON:0007811!3.28e-26!129;UBERON:0000956!3.36e-25!25;UBERON:0000203!3.36e-25!25;UBERON:0004121!1.18e-23!169;UBERON:0000924!5.76e-23!173;UBERON:0006601!5.76e-23!173;UBERON:0001950!8.30e-22!20;UBERON:0000025!4.28e-20!194;UBERON:0002420!6.85e-20!9;UBERON:0007245!6.85e-20!9;UBERON:0010009!6.85e-20!9;UBERON:0010011!6.85e-20!9;UBERON:0000454!6.85e-20!9;UBERON:0004732!1.28e-18!13;UBERON:0009663!3.54e-18!7;UBERON:0000349!1.01e-16!5;UBERON:0002240!2.15e-16!3;UBERON:0001896!2.26e-16!3;UBERON:0005290!2.26e-16!3;UBERON:0010096!2.26e-16!3;UBERON:0000988!1.22e-15!3;UBERON:0006331!1.91e-15!3;UBERON:0004111!6.93e-15!241;UBERON:0004733!7.66e-15!12;UBERON:0002028!7.66e-15!12;UBERON:0007277!7.66e-15!12;UBERON:0000477!1.55e-12!286;UBERON:0005162!5.07e-12!2;UBERON:0000122!5.07e-12!2;UBERON:0000369!7.05e-12!4;UBERON:0002435!7.05e-12!4;UBERON:0000204!7.05e-12!4;UBERON:0010082!7.05e-12!4;UBERON:0001954!2.44e-11!2;UBERON:0003022!2.44e-11!2;UBERON:0002421!2.44e-11!2;UBERON:0002600!2.44e-11!2;UBERON:0000483!4.69e-11!309;UBERON:0000119!6.96e-11!312;UBERON:0002148!1.37e-10!2;UBERON:0009662!1.37e-10!2;UBERON:0005174!4.98e-10!5;UBERON:0001137!4.98e-10!5;UBERON:0000064!9.34e-10!219;UBERON:0001872!1.19e-09!5;UBERON:0000475!4.89e-09!365;UBERON:0000200!7.51e-08!6;UBERON:0005383!1.99e-07!3;UBERON:0005382!1.99e-07!3;UBERON:0000062!6.11e-07!511;UBERON:0002336!7.49e-07!1;UBERON:0001018!7.49e-07!1;UBERON:0002473!7.49e-07!1;UBERON:0005340!7.49e-07!1;UBERON:0002316!7.49e-07!1;UBERON:0003544!7.49e-07!1;UBERON:0001020!7.49e-07!1;UBERON:0005970!7.49e-07!1;UBERON:0002437!7.49e-07!1;UBERON:0000941!7.90e-07!1;UBERON:0004904!7.90e-07!1;UBERON:0002464!7.90e-07!1;UBERON:0001021!7.90e-07!1;UBERON:0001785!7.90e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!1.52e-72!57;UBERON:0005068!1.52e-72!57;UBERON:0006241!1.52e-72!57;UBERON:0007135!1.52e-72!57;UBERON:0002616!1.22e-55!59;UBERON:0003075!1.51e-49!86;UBERON:0007284!1.51e-49!86;UBERON:0005743!6.54e-49!86;UBERON:0002780!2.78e-48!41;UBERON:0001890!2.78e-48!41;UBERON:0006240!2.78e-48!41;UBERON:0001017!3.95e-48!82;UBERON:0001893!1.28e-47!34;UBERON:0002020!3.31e-47!34;UBERON:0003528!3.31e-47!34;UBERON:0000073!4.30e-47!94;UBERON:0001016!4.30e-47!94;UBERON:0002346!4.38e-47!90;UBERON:0003080!4.76e-47!42;UBERON:0000955!4.21e-46!69;UBERON:0006238!4.21e-46!69;UBERON:0007023!3.96e-44!115;UBERON:0002791!5.11e-44!33;UBERON:0001869!5.78e-40!32;UBERON:0003056!2.56e-34!61;UBERON:0002298!1.39e-30!8;UBERON:0002619!8.33e-29!22;UBERON:0000033!9.07e-28!123;UBERON:0002308!1.57e-26!9;UBERON:0000125!1.57e-26!9;UBERON:0003076!2.61e-26!15;UBERON:0003057!2.61e-26!15;UBERON:0000153!3.28e-26!129;UBERON:0007811!3.28e-26!129;UBERON:0000956!3.36e-25!25;UBERON:0000203!3.36e-25!25;UBERON:0004121!1.18e-23!169;UBERON:0000924!5.76e-23!173;UBERON:0006601!5.76e-23!173;UBERON:0001950!8.30e-22!20;UBERON:0000025!4.28e-20!194;UBERON:0002420!6.85e-20!9;UBERON:0007245!6.85e-20!9;UBERON:0010009!6.85e-20!9;UBERON:0010011!6.85e-20!9;UBERON:0000454!6.85e-20!9;UBERON:0004732!1.28e-18!13;UBERON:0009663!3.54e-18!7;UBERON:0000349!1.01e-16!5;UBERON:0002240!2.15e-16!3;UBERON:0001896!2.26e-16!3;UBERON:0005290!2.26e-16!3;UBERON:0010096!2.26e-16!3;UBERON:0000988!1.22e-15!3;UBERON:0006331!1.91e-15!3;UBERON:0004111!6.93e-15!241;UBERON:0004733!7.66e-15!12;UBERON:0002028!7.66e-15!12;UBERON:0007277!7.66e-15!12;UBERON:0000477!1.55e-12!286;UBERON:0005162!5.07e-12!2;UBERON:0000122!5.07e-12!2;UBERON:0000369!7.05e-12!4;UBERON:0002435!7.05e-12!4;UBERON:0000204!7.05e-12!4;UBERON:0010082!7.05e-12!4;UBERON:0001954!2.44e-11!2;UBERON:0003022!2.44e-11!2;UBERON:0002421!2.44e-11!2;UBERON:0002600!2.44e-11!2;UBERON:0000483!4.69e-11!309;UBERON:0000119!6.96e-11!312;UBERON:0002148!1.37e-10!2;UBERON:0009662!1.37e-10!2;UBERON:0005174!4.98e-10!5;UBERON:0001137!4.98e-10!5;UBERON:0000064!9.34e-10!219;UBERON:0001872!1.19e-09!5;UBERON:0000475!4.89e-09!365;UBERON:0000200!7.51e-08!6;UBERON:0005383!1.99e-07!3;UBERON:0005382!1.99e-07!3;UBERON:0000062!6.11e-07!511;UBERON:0002336!7.49e-07!1;UBERON:0001018!7.49e-07!1;UBERON:0002473!7.49e-07!1;UBERON:0005340!7.49e-07!1;UBERON:0002316!7.49e-07!1;UBERON:0003544!7.49e-07!1;UBERON:0001020!7.49e-07!1;UBERON:0005970!7.49e-07!1;UBERON:0002437!7.49e-07!1;UBERON:0000941!7.90e-07!1;UBERON:0004904!7.90e-07!1;UBERON:0002464!7.90e-07!1;UBERON:0001021!7.90e-07!1;UBERON:0001785!7.90e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;8.98e-131;2!UBERON:0000122;8.98e-131;2!UBERON:0002336;2.39e-66;1!UBERON:0000941;2.39e-66;1!UBERON:0001785;2.39e-66;1!UBERON:0002464;2.39e-66;1!UBERON:0004904;2.39e-66;1!UBERON:0011215;2.39e-66;1!UBERON:0001018;2.39e-66;1!UBERON:0001021;2.39e-66;1!UBERON:0002473;2.39e-66;1!UBERON:0005340;2.39e-66;1!UBERON:0003544;2.39e-66;1!UBERON:0005970;2.39e-66;1!UBERON:0002316;2.39e-66;1!UBERON:0001020;2.39e-66;1!UBERON:0002437;2.39e-66;1!UBERON:0003714;5.04e-34;2!UBERON:0000010;1.12e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,4.61e-131,2;UBERON:0000122,4.61e-131,2;UBERON:0002336,1.23e-66,1;UBERON:0011215,1.23e-66,1;UBERON:0001018,1.23e-66,1;UBERON:0002473,1.23e-66,1;UBERON:0005340,1.23e-66,1;UBERON:0003544,1.23e-66,1;UBERON:0005970,1.23e-66,1;UBERON:0002316,1.23e-66,1;UBERON:0001020,1.23e-66,1;UBERON:0002437,1.23e-66,1;UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0003714,5.04e-34,2;UBERON:0001781,8.69e-18,4;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0000010,1.12e-08,8 | |||
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|short_description=p32@NAV3 | |short_description=p32@NAV3 | ||
}} | }} |
Latest revision as of 22:39, 24 September 2015
Short description: | p32@NAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_NAV3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -369bp_to_ENST00000547725, ENST00000550503_5end |
EntrezGene: | NAV3 |
HGNC: | 15998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 4.61e-131 | 2 |
neuron projection bundle | 4.61e-131 | 2 |
corpus callosum | 1.23e-66 | 1 |
central nervous system cell part cluster | 1.23e-66 | 1 |
axon tract | 1.23e-66 | 1 |
intercerebral commissure | 1.23e-66 | 1 |
dorsal telencephalic commissure | 1.23e-66 | 1 |
brain white matter | 1.23e-66 | 1 |
brain commissure | 1.23e-66 | 1 |
white matter | 1.23e-66 | 1 |
nervous system commissure | 1.23e-66 | 1 |
cerebral hemisphere white matter | 1.23e-66 | 1 |
cranial nerve II | 2.39e-66 | 1 |
cranial nerve | 2.39e-66 | 1 |
nerve trunk | 2.39e-66 | 1 |
nerve connecting eye with brain | 2.39e-66 | 1 |
nerve | 2.39e-66 | 1 |
retinal neural layer | 2.39e-66 | 1 |
presumptive neural retina | 2.39e-66 | 1 |
neural tissue | 5.04e-34 | 2 |
layer of retina | 8.69e-18 | 4 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
peripheral nervous system | 1.12e-08 | 8 |