FFCP PHASE1:Hg19::chr1:211500017..211500028,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:211500017..211500028,+ to FFCP PHASE1:Hg19::chr1:211500017..211500028,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7188 | |EntrezGene=7188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12035 | |HGNC=12035 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000488428_5end | |||
|cluster_id=chr1:211500017..211500028,+ | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_4_at_TRAF5_5end | |||
|id=chr1:211500017..211500028,+ | |||
|ontology_enrichment_celltype=CL:0000557!5.89e-21!71;CL:0002031!3.55e-20!124;CL:0000738!3.50e-19!140;CL:0000839!1.42e-17!70;CL:0002087!1.59e-16!119;CL:0002009!2.59e-16!65;CL:0000766!5.27e-16!76;CL:0000037!1.71e-15!172;CL:0000566!1.71e-15!172;CL:0000988!2.04e-15!182;CL:0002032!2.81e-15!165;CL:0000837!2.81e-15!165;CL:0002194!7.70e-15!63;CL:0000576!7.70e-15!63;CL:0000040!7.70e-15!63;CL:0000559!7.70e-15!63;CL:0000763!1.53e-12!112;CL:0000049!1.53e-12!112;CL:0002057!4.09e-12!42;CL:0000860!1.18e-10!45;CL:0000990!3.60e-07!8;CL:0000840!8.35e-07!5;CL:0001029!8.35e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.13e-21;5!CL:0000163;4.05e-12;9!CL:0000148;1.41e-10;10!CL:0002619;1.31e-09;3!CL:0002032;7.93e-08;1!CL:0000557;7.93e-08;1!CL:0002566;7.93e-08;1!CL:0000147;1.38e-07;14!CL:0000990;5.08e-07;8!CL:0000766;7.82e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.97e-22,5;CL:0002028,3.97e-22,5;CL:0000557,1.29e-18,67;CL:0000839,5.96e-14,66;CL:0000766,1.34e-12,72;CL:0000163,2.30e-12,9;CL:0000763,3.95e-12,108;CL:0000049,3.95e-12,108;CL:0002031,4.55e-12,120;CL:0000738,9.95e-12,136;CL:0002032,1.22e-10,161;CL:0000837,1.22e-10,161;CL:0000148,2.07e-10,10;CL:0000541,2.07e-10,10;CL:0000037,4.82e-10,168;CL:0002619,1.64e-09,3;CL:0000988,2.41e-09,177;CL:0002009,1.07e-08,61;CL:0000147,1.80e-07,14;CL:0002566,1.99e-07,1;CL:0002194,2.97e-07,59;CL:0000576,2.97e-07,59;CL:0000040,2.97e-07,59;CL:0000559,2.97e-07,59;CL:0000990,3.02e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0001045;7.93e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;7.93e-08;1!DOID:1357;7.93e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.97e-08,1;DOID:1357,6.97e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.52e-18!112;UBERON:0002371!1.52e-17!80;UBERON:0002390!1.64e-17!102;UBERON:0003061!1.64e-17!102;UBERON:0001474!4.04e-15!86;UBERON:0002405!1.61e-14!115;UBERON:0004765!1.25e-11!101;UBERON:0001434!1.25e-11!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;7.93e-08;1!UBERON:0001153;7.93e-08;1!UBERON:0001764;7.93e-08;1!UBERON:0009854;7.93e-08;1!UBERON:0001825;7.93e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.33e-16,76;UBERON:0001474,1.04e-14,82;UBERON:0004765,3.74e-13,90;UBERON:0002405,1.23e-12,93;UBERON:0002390,7.54e-12,98;UBERON:0003061,7.54e-12,98;UBERON:0001434,1.48e-11,100;UBERON:0002193,1.73e-10,108;UBERON:0001764,6.97e-08,1;UBERON:0001825,6.97e-08,1;UBERON:0001154,7.45e-08,1;UBERON:0001153,7.45e-08,1;UBERON:0001045,7.45e-08,1 | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0.767658796194425,0,0,0,0,0.232401601740905,0,0.293600439334847,0,0.200544447470142,0,1.11957737119962,0.971680998056939,1.54545340580512,0.145398238779565,1.13362783106643,0.485168122375632,0.232429036905685,0.411167888021826,1.23882548358041,0.575384784644301,0.768482119587302,0.47296445977717,0.689491361473237,1.93645405075148,0,0.376484679085209,1.09162460023138,0.449446968890169,1.22433556948361,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0.75374599577023,0,0.434377689410233,0,0.736555271975129,0,0,0,0.419317291016752,0,0,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,0.569212969109448,1.17447437874188,1.14681968437569,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0.473447805734733,0,0.222820913770347,0.589211814949674,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0.97364218096405,1.74129737299267,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0.246217006087397,0.702012795417713,0.297262324577456,0,0,0,0,0,0,1.97065295158377,0.352193736052904,1.65862492432618,23.4915524069647,3.66103056936502,1.0159663086747,0.763976851116555,0,1.71072446022705,1.02827492703324,1.50171528921959,0.857479297891735,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0.767309866440312,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0.318852545457645,0.59873811429845,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0.398495976502139,1.38141957765574,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.493217028184668,0,0,0.969332746095218,0.185536196323703,1.99613798001194,0.7812832832557,0.0874599999961957,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.83309043480088,0.296521128680622,0.123563938946503,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,0,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0.577901179803038,0,0,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,1.799791132412,0.77380195455795,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.427149650270779,0,0.414239055347196,0.992332043623902,0,0.121792598380896,0,0,0,0,0,1.41348686625211,0,0,0,0.573409195690071,0,0.248385611765534,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.295710299979268,0,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,1.59437808376036,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.431299245586727,0,0.109209638192014,0,0,0,0,0,0.70975570501128,0,0,0,0.385375350578757,1.41696576325585,0.159633859057151,0,0.756215088665154,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.472763092328763,0,0.206686796501184,0.0634158101939068,0,0,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| ||
|short_description=p4@TRAF5 | |||
}} | }} |
Latest revision as of 22:46, 24 September 2015
Short description: | p4@TRAF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRAF5_5end |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | -11bp_to_ENST00000488428_5end |
EntrezGene: | TRAF5 |
HGNC: | 12035 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.97e-22 | 5 |
basophil mast progenitor cell | 3.97e-22 | 5 |
granulocyte monocyte progenitor cell | 1.29e-18 | 67 |
myeloid lineage restricted progenitor cell | 5.96e-14 | 66 |
myeloid leukocyte | 1.34e-12 | 72 |
endocrine cell | 2.30e-12 | 9 |
myeloid cell | 3.95e-12 | 108 |
common myeloid progenitor | 3.95e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 4.55e-12 | 120 |
leukocyte | 9.95e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.22e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-10 | 161 |
melanocyte | 2.07e-10 | 10 |
melanoblast | 2.07e-10 | 10 |
hematopoietic stem cell | 4.82e-10 | 168 |
adult endothelial progenitor cell | 1.64e-09 | 3 |
hematopoietic cell | 2.41e-09 | 177 |
macrophage dendritic cell progenitor | 1.07e-08 | 61 |
pigment cell | 1.80e-07 | 14 |
dark melanocyte | 1.99e-07 | 1 |
monopoietic cell | 2.97e-07 | 59 |
monocyte | 2.97e-07 | 59 |
monoblast | 2.97e-07 | 59 |
promonocyte | 2.97e-07 | 59 |
conventional dendritic cell | 3.02e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.33e-16 | 76 |
bone element | 1.04e-14 | 82 |
skeletal element | 3.74e-13 | 90 |
immune system | 1.23e-12 | 93 |
hematopoietic system | 7.54e-12 | 98 |
blood island | 7.54e-12 | 98 |
skeletal system | 1.48e-11 | 100 |
hemolymphoid system | 1.73e-10 | 108 |
maxillary sinus | 6.97e-08 | 1 |
paranasal sinus | 6.97e-08 | 1 |
vermiform appendix | 7.45e-08 | 1 |
caecum | 7.45e-08 | 1 |
midgut | 7.45e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.97e-08 | 1 |
maxillary sinus cancer | 6.97e-08 | 1 |