FFCP PHASE1:Hg19::chr17:42983463..42983466,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=404bp_to_U92979_5end | |association_with_transcript=404bp_to_U92979_5end | ||
|cluster_id=chr17:42983463..42983466,- | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_45_at_GFAP_5end | |description=CAGE_peak_45_at_GFAP_5end | ||
|id=chr17:42983463..42983466,- | |id=chr17:42983463..42983466,- | ||
|ontology_enrichment_celltype=CL:0002605!2.00e-15!3;CL:0000128!1.85e-11!7;CL:0000126!1.85e-11!7;CL:0000127!1.85e-11!7;CL:0002453!1.85e-11!7 | |ontology_enrichment_celltype=CL:0002605!2.00e-15!3;CL:0000128!1.85e-11!7;CL:0000126!1.85e-11!7;CL:0000127!1.85e-11!7;CL:0002453!1.85e-11!7 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.13e-30;3!UBERON:0003057;2.13e-30;3!UBERON:0005425;3.67e-23;1!UBERON:0003056;1.26e-08;3!UBERON:0006601;5.43e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.35e-103!57;UBERON:0005068!4.35e-103!57;UBERON:0006241!4.35e-103!57;UBERON:0007135!4.35e-103!57;UBERON:0002616!1.23e-87!59;UBERON:0001017!2.71e-82!82;UBERON:0005743!3.15e-78!86;UBERON:0000955!1.02e-77!69;UBERON:0006238!1.02e-77!69;UBERON:0000073!1.97e-74!94;UBERON:0001016!1.97e-74!94;UBERON:0002780!8.91e-67!41;UBERON:0001890!8.91e-67!41;UBERON:0006240!8.91e-67!41;UBERON:0003075!2.13e-66!86;UBERON:0007284!2.13e-66!86;UBERON:0003080!4.29e-65!42;UBERON:0002346!3.60e-63!90;UBERON:0002020!2.35e-62!34;UBERON:0003528!2.35e-62!34;UBERON:0001893!8.31e-62!34;UBERON:0002791!4.87e-58!33;UBERON:0001869!1.00e-53!32;UBERON:0000956!4.54e-44!25;UBERON:0000203!4.54e-44!25;UBERON:0000033!8.57e-44!123;UBERON:0003056!2.00e-43!61;UBERON:0007023!9.63e-43!115;UBERON:0000153!1.84e-41!129;UBERON:0007811!1.84e-41!129;UBERON:0004121!8.22e-39!169;UBERON:0003076!1.02e-38!15;UBERON:0003057!1.02e-38!15;UBERON:0000924!9.20e-38!173;UBERON:0006601!9.20e-38!173;UBERON:0004732!6.77e-37!13;UBERON:0002619!1.01e-32!22;UBERON:0004733!2.41e-32!12;UBERON:0002028!2.41e-32!12;UBERON:0007277!2.41e-32!12;UBERON:0002298!1.26e-30!8;UBERON:0000025!1.14e-25!194;UBERON:0001950!1.63e-25!20;UBERON:0001871!4.58e-21!7;UBERON:0002308!1.95e-19!9;UBERON:0000125!1.95e-19!9;UBERON:0004111!2.85e-19!241;UBERON:0002680!3.61e-19!9;UBERON:0001895!3.61e-19!9;UBERON:0010092!3.61e-19!9;UBERON:0001896!2.18e-16!3;UBERON:0005290!2.18e-16!3;UBERON:0010096!2.18e-16!3;UBERON:0006331!2.68e-16!3;UBERON:0000477!2.85e-16!286;UBERON:0000349!6.89e-16!5;UBERON:0000988!9.00e-16!3;UBERON:0002771!7.13e-15!3;UBERON:0000064!9.14e-15!219;UBERON:0000483!1.95e-13!309;UBERON:0002420!2.19e-13!9;UBERON:0007245!2.19e-13!9;UBERON:0010009!2.19e-13!9;UBERON:0010011!2.19e-13!9;UBERON:0000454!2.19e-13!9;UBERON:0000119!3.08e-13!312;UBERON:0000200!8.55e-13!6;UBERON:0000475!4.68e-12!365;UBERON:0002148!1.55e-11!2;UBERON:0009662!1.55e-11!2;UBERON:0009663!2.64e-11!7;UBERON:0005162!2.73e-11!2;UBERON:0000122!2.73e-11!2;UBERON:0001954!5.00e-11!2;UBERON:0003022!5.00e-11!2;UBERON:0002421!5.00e-11!2;UBERON:0002600!5.00e-11!2;UBERON:0002021!1.21e-09!5;UBERON:0002240!4.75e-08!3;UBERON:0002037!9.42e-08!6;UBERON:0006215!9.42e-08!6;UBERON:0001894!4.10e-07!7;UBERON:0006222!4.10e-07!7;UBERON:0000062!4.29e-07!511;UBERON:0000481!6.58e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.57e-58;6!UBERON:0002148;1.91e-44;2!UBERON:0006331;1.91e-44;2!UBERON:0009662;1.91e-44;2!UBERON:0004732;3.70e-42;13!UBERON:0002240;2.13e-30;3!UBERON:0005174;2.13e-30;3!UBERON:0001137;2.13e-30;3!UBERON:0001896;2.67e-30;3!UBERON:0005290;2.67e-30;3!UBERON:0000988;4.83e-30;3!UBERON:0004733;1.33e-29;12!UBERON:0002028;1.33e-29;12!UBERON:0000941;3.67e-23;1!UBERON:0001785;3.67e-23;1!UBERON:0002464;3.67e-23;1!UBERON:0004904;3.67e-23;1!UBERON:0001021;3.67e-23;1!UBERON:0001954;2.74e-12;2!UBERON:0003714;2.74e-12;2!UBERON:0005162;2.74e-12;2!UBERON:0000122;2.74e-12;2!UBERON:0003022;2.74e-12;2!UBERON:0002421;2.74e-12;2!UBERON:0002600;2.74e-12;2!UBERON:0002680;1.02e-10;9!UBERON:0000125;1.02e-10;9!UBERON:0002308;1.02e-10;9!UBERON:0001895;1.02e-10;9!UBERON:0000073;5.55e-07;53!UBERON:0002616;5.55e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.57e-58,6;UBERON:0003076,1.74e-52,15;UBERON:0003057,1.74e-52,15;UBERON:0002148,2.39e-44,2;UBERON:0006331,2.39e-44,2;UBERON:0009662,2.39e-44,2;UBERON:0004732,4.21e-42,13;UBERON:0001896,2.30e-30,3;UBERON:0002240,2.30e-30,3;UBERON:0005174,2.30e-30,3;UBERON:0005290,2.30e-30,3;UBERON:0001137,2.30e-30,3;UBERON:0010096,2.30e-30,3;UBERON:0000988,5.61e-30,3;UBERON:0004733,1.33e-29,12;UBERON:0002028,1.33e-29,12;UBERON:0007277,1.33e-29,12;UBERON:0000941,5.13e-23,1;UBERON:0001785,5.13e-23,1;UBERON:0002464,5.13e-23,1;UBERON:0004904,5.13e-23,1;UBERON:0001021,5.13e-23,1;UBERON:0003902,5.13e-23,1;UBERON:0005425,5.13e-23,1;UBERON:0001016,3.70e-19,89;UBERON:0001049,8.09e-19,56;UBERON:0005068,8.09e-19,56;UBERON:0006241,8.09e-19,56;UBERON:0007135,8.09e-19,56;UBERON:0001017,8.16e-17,81;UBERON:0003075,9.09e-17,82;UBERON:0007284,9.09e-17,82;UBERON:0002346,5.44e-16,86;UBERON:0010371,3.21e-13,104;UBERON:0001954,2.07e-12,2;UBERON:0003022,2.07e-12,2;UBERON:0002421,2.07e-12,2;UBERON:0002600,2.07e-12,2;UBERON:0003714,3.24e-12,2;UBERON:0005162,3.24e-12,2;UBERON:0000122,3.24e-12,2;UBERON:0007023,3.69e-12,114;UBERON:0002680,1.07e-10,9;UBERON:0000125,1.07e-10,9;UBERON:0002308,1.07e-10,9;UBERON:0001895,1.07e-10,9;UBERON:0010092,1.07e-10,9;UBERON:0010314,2.18e-10,132;UBERON:0000073,2.21e-10,53;UBERON:0002616,2.21e-10,53;UBERON:0004121,5.05e-10,171;UBERON:0000924,5.05e-10,171;UBERON:0006601,5.05e-10,171;UBERON:0000955,4.89e-08,68;UBERON:0006238,4.89e-08,68;UBERON:0011216,1.33e-07,223;UBERON:0001781,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,3.44045517414043,1.55300672151593,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.82046545696302,0,0.276629009856872,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3187862765288,1.48523200163543,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,3.44045517414043,1.55300672151593,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.82046545696302,0,0.276629009856872,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3187862765288,1.48523200163543,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p45@GFAP | |short_description=p45@GFAP | ||
}} | }} |
Latest revision as of 23:00, 24 September 2015
Short description: | p45@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_45_at_GFAP_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | 404bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data