FFCP PHASE1:Hg19::chr17:42984002..42984013,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-131bp_to_U92979_5end | |association_with_transcript=-131bp_to_U92979_5end | ||
|cluster_id=chr17:42984002..42984013,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_30_at_GFAP_5end | |description=CAGE_peak_30_at_GFAP_5end | ||
|id=chr17:42984002..42984013,- | |id=chr17:42984002..42984013,- | ||
|ontology_enrichment_celltype=CL:0002605!5.02e-13!3;CL:0000128!1.83e-09!7;CL:0000126!1.83e-09!7;CL:0000127!1.83e-09!7;CL:0002453!1.83e-09!7;CL:0002319!6.07e-08!25;CL:0000047!1.28e-07!8 | |ontology_enrichment_celltype=CL:0002605!5.02e-13!3;CL:0000128!1.83e-09!7;CL:0000126!1.83e-09!7;CL:0000127!1.83e-09!7;CL:0002453!1.83e-09!7;CL:0002319!6.07e-08!25;CL:0000047!1.28e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002605;7.69e-22;3!CL:0000128;1.11e-09;7!CL:0000126;1.11e-09;7!CL:0000127;1.11e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.66e-22,3;CL:0000128,9.00e-10,7;CL:0000126,9.00e-10,7;CL:0000127,9.00e-10,7;CL:0002453,9.00e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.03e-23;3!UBERON:0003057;4.03e-23;3!UBERON:0006601;1.22e-12;82!UBERON:0006215;3.01e-10;3!UBERON:0006222;1.10e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.04e-106!57;UBERON:0005068!3.04e-106!57;UBERON:0006241!3.04e-106!57;UBERON:0007135!3.04e-106!57;UBERON:0001017!5.71e-99!82;UBERON:0005743!4.01e-98!86;UBERON:0000073!4.08e-88!94;UBERON:0001016!4.08e-88!94;UBERON:0002616!2.05e-86!59;UBERON:0000955!3.33e-80!69;UBERON:0006238!3.33e-80!69;UBERON:0003075!5.02e-75!86;UBERON:0007284!5.02e-75!86;UBERON:0002346!2.58e-71!90;UBERON:0002020!2.72e-69!34;UBERON:0003528!2.72e-69!34;UBERON:0001893!1.10e-68!34;UBERON:0002780!3.61e-66!41;UBERON:0001890!3.61e-66!41;UBERON:0006240!3.61e-66!41;UBERON:0002791!1.68e-65!33;UBERON:0003080!1.82e-64!42;UBERON:0001869!1.88e-61!32;UBERON:0000956!3.93e-49!25;UBERON:0000203!3.93e-49!25;UBERON:0007023!8.74e-49!115;UBERON:0000033!1.46e-46!123;UBERON:0003056!8.87e-46!61;UBERON:0004121!2.08e-45!169;UBERON:0000924!3.76e-44!173;UBERON:0006601!3.76e-44!173;UBERON:0000153!5.34e-44!129;UBERON:0007811!5.34e-44!129;UBERON:0003076!2.81e-43!15;UBERON:0003057!2.81e-43!15;UBERON:0002619!7.71e-39!22;UBERON:0001950!2.89e-32!20;UBERON:0004733!8.71e-32!12;UBERON:0002028!8.71e-32!12;UBERON:0007277!8.71e-32!12;UBERON:0004732!3.49e-29!13;UBERON:0000025!1.32e-26!194;UBERON:0002298!1.61e-24!8;UBERON:0002308!3.23e-21!9;UBERON:0000125!3.23e-21!9;UBERON:0002680!5.93e-21!9;UBERON:0001895!5.93e-21!9;UBERON:0010092!5.93e-21!9;UBERON:0004111!1.31e-19!241;UBERON:0001871!8.02e-17!7;UBERON:0000477!3.65e-16!286;UBERON:0000200!1.56e-15!6;UBERON:0002420!2.10e-15!9;UBERON:0007245!2.10e-15!9;UBERON:0010009!2.10e-15!9;UBERON:0010011!2.10e-15!9;UBERON:0000454!2.10e-15!9;UBERON:0000483!3.58e-15!309;UBERON:0000119!6.19e-15!312;UBERON:0000064!1.24e-14!219;UBERON:0009663!5.19e-14!7;UBERON:0002240!1.54e-13!3;UBERON:0006331!1.54e-13!3;UBERON:0001896!4.64e-13!3;UBERON:0005290!4.64e-13!3;UBERON:0010096!4.64e-13!3;UBERON:0000988!6.14e-13!3;UBERON:0000349!7.95e-13!5;UBERON:0000475!2.83e-12!365;UBERON:0002771!3.91e-12!3;UBERON:0002037!1.01e-10!6;UBERON:0006215!1.01e-10!6;UBERON:0002148!1.36e-09!2;UBERON:0009662!1.36e-09!2;UBERON:0001954!3.76e-09!2;UBERON:0003022!3.76e-09!2;UBERON:0002421!3.76e-09!2;UBERON:0002600!3.76e-09!2;UBERON:0000369!4.44e-09!4;UBERON:0002435!4.44e-09!4;UBERON:0000204!4.44e-09!4;UBERON:0010082!4.44e-09!4;UBERON:0005174!2.81e-08!5;UBERON:0001137!2.81e-08!5;UBERON:0002021!1.45e-07!5;UBERON:0001872!2.33e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!3.04e-106!57;UBERON:0005068!3.04e-106!57;UBERON:0006241!3.04e-106!57;UBERON:0007135!3.04e-106!57;UBERON:0001017!5.71e-99!82;UBERON:0005743!4.01e-98!86;UBERON:0000073!4.08e-88!94;UBERON:0001016!4.08e-88!94;UBERON:0002616!2.05e-86!59;UBERON:0000955!3.33e-80!69;UBERON:0006238!3.33e-80!69;UBERON:0003075!5.02e-75!86;UBERON:0007284!5.02e-75!86;UBERON:0002346!2.58e-71!90;UBERON:0002020!2.72e-69!34;UBERON:0003528!2.72e-69!34;UBERON:0001893!1.10e-68!34;UBERON:0002780!3.61e-66!41;UBERON:0001890!3.61e-66!41;UBERON:0006240!3.61e-66!41;UBERON:0002791!1.68e-65!33;UBERON:0003080!1.82e-64!42;UBERON:0001869!1.88e-61!32;UBERON:0000956!3.93e-49!25;UBERON:0000203!3.93e-49!25;UBERON:0007023!8.74e-49!115;UBERON:0000033!1.46e-46!123;UBERON:0003056!8.87e-46!61;UBERON:0004121!2.08e-45!169;UBERON:0000924!3.76e-44!173;UBERON:0006601!3.76e-44!173;UBERON:0000153!5.34e-44!129;UBERON:0007811!5.34e-44!129;UBERON:0003076!2.81e-43!15;UBERON:0003057!2.81e-43!15;UBERON:0002619!7.71e-39!22;UBERON:0001950!2.89e-32!20;UBERON:0004733!8.71e-32!12;UBERON:0002028!8.71e-32!12;UBERON:0007277!8.71e-32!12;UBERON:0004732!3.49e-29!13;UBERON:0000025!1.32e-26!194;UBERON:0002298!1.61e-24!8;UBERON:0002308!3.23e-21!9;UBERON:0000125!3.23e-21!9;UBERON:0002680!5.93e-21!9;UBERON:0001895!5.93e-21!9;UBERON:0010092!5.93e-21!9;UBERON:0004111!1.31e-19!241;UBERON:0001871!8.02e-17!7;UBERON:0000477!3.65e-16!286;UBERON:0000200!1.56e-15!6;UBERON:0002420!2.10e-15!9;UBERON:0007245!2.10e-15!9;UBERON:0010009!2.10e-15!9;UBERON:0010011!2.10e-15!9;UBERON:0000454!2.10e-15!9;UBERON:0000483!3.58e-15!309;UBERON:0000119!6.19e-15!312;UBERON:0000064!1.24e-14!219;UBERON:0009663!5.19e-14!7;UBERON:0002240!1.54e-13!3;UBERON:0006331!1.54e-13!3;UBERON:0001896!4.64e-13!3;UBERON:0005290!4.64e-13!3;UBERON:0010096!4.64e-13!3;UBERON:0000988!6.14e-13!3;UBERON:0000349!7.95e-13!5;UBERON:0000475!2.83e-12!365;UBERON:0002771!3.91e-12!3;UBERON:0002037!1.01e-10!6;UBERON:0006215!1.01e-10!6;UBERON:0002148!1.36e-09!2;UBERON:0009662!1.36e-09!2;UBERON:0001954!3.76e-09!2;UBERON:0003022!3.76e-09!2;UBERON:0002421!3.76e-09!2;UBERON:0002600!3.76e-09!2;UBERON:0000369!4.44e-09!4;UBERON:0002435!4.44e-09!4;UBERON:0000204!4.44e-09!4;UBERON:0010082!4.44e-09!4;UBERON:0005174!2.81e-08!5;UBERON:0001137!2.81e-08!5;UBERON:0002021!1.45e-07!5;UBERON:0001872!2.33e-07!5 | ||
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|short_description=p30@GFAP | |short_description=p30@GFAP | ||
}} | }} |
Latest revision as of 23:12, 24 September 2015
Short description: | p30@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -131bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.66e-22 | 3 |
oligodendrocyte | 9.00e-10 | 7 |
macroglial cell | 9.00e-10 | 7 |
astrocyte | 9.00e-10 | 7 |
oligodendrocyte precursor cell | 9.00e-10 | 7 |