FFCP PHASE1:Hg19::chr5:138210977..138210999,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26045 | |EntrezGene=26045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19409 | |HGNC=19409 | ||
|TSSclassifier=strong | |||
|UniProt=O43300,E5RHE5 | |UniProt=O43300,E5RHE5 | ||
|association_with_transcript=0bp_to_ENST00000274711,ENST00000521094_5end | |association_with_transcript=0bp_to_ENST00000274711,ENST00000521094_5end | ||
|cluster_id=chr5:138210977..138210999,- | |||
|coexpression_cluster_id=C257 | |||
|description=CAGE_peak_2_at_LRRTM2_5end | |description=CAGE_peak_2_at_LRRTM2_5end | ||
|id=chr5:138210977..138210999,- | |id=chr5:138210977..138210999,- | ||
|ontology_enrichment_celltype=CL:0002319!5.30e-07!25 | |ontology_enrichment_celltype=CL:0002319!5.30e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002605;4.22e-07;3!CL:0002319;5.42e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.90e-08,8;CL:0002605,3.37e-07,3;CL:0002319,5.18e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.57e-20;82!UBERON:0006215;1.36e-07;3!UBERON:0006241;1.77e-07;3!UBERON:0003057;1.77e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.75e-62!94;UBERON:0001016!8.75e-62!94;UBERON:0005743!7.63e-61!86;UBERON:0001017!2.55e-59!82;UBERON:0001049!7.40e-53!57;UBERON:0005068!7.40e-53!57;UBERON:0006241!7.40e-53!57;UBERON:0007135!7.40e-53!57;UBERON:0000955!2.54e-51!69;UBERON:0006238!2.54e-51!69;UBERON:0002616!9.76e-46!59;UBERON:0003075!2.69e-45!86;UBERON:0007284!2.69e-45!86;UBERON:0002346!5.42e-45!90;UBERON:0002780!1.41e-43!41;UBERON:0001890!1.41e-43!41;UBERON:0006240!1.41e-43!41;UBERON:0003080!3.65e-42!42;UBERON:0001893!3.58e-38!34;UBERON:0002020!4.23e-38!34;UBERON:0003528!4.23e-38!34;UBERON:0000153!2.68e-37!129;UBERON:0007811!2.68e-37!129;UBERON:0000033!4.36e-37!123;UBERON:0002791!5.65e-37!33;UBERON:0000924!2.16e-36!173;UBERON:0006601!2.16e-36!173;UBERON:0001869!3.76e-36!32;UBERON:0003056!3.87e-36!61;UBERON:0004121!4.96e-36!169;UBERON:0000956!3.38e-28!25;UBERON:0000203!3.38e-28!25;UBERON:0002619!2.17e-25!22;UBERON:0007023!4.40e-24!115;UBERON:0001950!3.56e-23!20;UBERON:0000475!2.71e-12!365;UBERON:0003076!1.26e-11!15;UBERON:0003057!1.26e-11!15;UBERON:0002420!2.86e-11!9;UBERON:0007245!2.86e-11!9;UBERON:0010009!2.86e-11!9;UBERON:0010011!2.86e-11!9;UBERON:0000454!2.86e-11!9;UBERON:0002308!3.15e-11!9;UBERON:0000125!3.15e-11!9;UBERON:0000064!3.15e-10!219;UBERON:0000025!3.79e-10!194;UBERON:0004111!8.85e-10!241;UBERON:0004732!9.40e-10!13;UBERON:0000477!1.42e-09!286;UBERON:0009663!3.73e-09!7;UBERON:0004733!7.93e-09!12;UBERON:0002028!7.93e-09!12;UBERON:0007277!7.93e-09!12;UBERON:0000200!1.26e-08!6;UBERON:0001871!3.93e-08!7;UBERON:0000480!4.74e-08!626;UBERON:0000467!1.05e-07!625;UBERON:0000468!1.07e-07!659;UBERON:0000483!1.26e-07!309;UBERON:0001872!1.75e-07!5;UBERON:0002021!2.19e-07!5;UBERON:0000119!2.42e-07!312;UBERON:0002298!2.88e-07!8;UBERON:0000349!4.12e-07!5;UBERON:0001894!7.86e-07!7;UBERON:0006222!7.86e-07!7 | |ontology_enrichment_uberon=UBERON:0000073!8.75e-62!94;UBERON:0001016!8.75e-62!94;UBERON:0005743!7.63e-61!86;UBERON:0001017!2.55e-59!82;UBERON:0001049!7.40e-53!57;UBERON:0005068!7.40e-53!57;UBERON:0006241!7.40e-53!57;UBERON:0007135!7.40e-53!57;UBERON:0000955!2.54e-51!69;UBERON:0006238!2.54e-51!69;UBERON:0002616!9.76e-46!59;UBERON:0003075!2.69e-45!86;UBERON:0007284!2.69e-45!86;UBERON:0002346!5.42e-45!90;UBERON:0002780!1.41e-43!41;UBERON:0001890!1.41e-43!41;UBERON:0006240!1.41e-43!41;UBERON:0003080!3.65e-42!42;UBERON:0001893!3.58e-38!34;UBERON:0002020!4.23e-38!34;UBERON:0003528!4.23e-38!34;UBERON:0000153!2.68e-37!129;UBERON:0007811!2.68e-37!129;UBERON:0000033!4.36e-37!123;UBERON:0002791!5.65e-37!33;UBERON:0000924!2.16e-36!173;UBERON:0006601!2.16e-36!173;UBERON:0001869!3.76e-36!32;UBERON:0003056!3.87e-36!61;UBERON:0004121!4.96e-36!169;UBERON:0000956!3.38e-28!25;UBERON:0000203!3.38e-28!25;UBERON:0002619!2.17e-25!22;UBERON:0007023!4.40e-24!115;UBERON:0001950!3.56e-23!20;UBERON:0000475!2.71e-12!365;UBERON:0003076!1.26e-11!15;UBERON:0003057!1.26e-11!15;UBERON:0002420!2.86e-11!9;UBERON:0007245!2.86e-11!9;UBERON:0010009!2.86e-11!9;UBERON:0010011!2.86e-11!9;UBERON:0000454!2.86e-11!9;UBERON:0002308!3.15e-11!9;UBERON:0000125!3.15e-11!9;UBERON:0000064!3.15e-10!219;UBERON:0000025!3.79e-10!194;UBERON:0004111!8.85e-10!241;UBERON:0004732!9.40e-10!13;UBERON:0000477!1.42e-09!286;UBERON:0009663!3.73e-09!7;UBERON:0004733!7.93e-09!12;UBERON:0002028!7.93e-09!12;UBERON:0007277!7.93e-09!12;UBERON:0000200!1.26e-08!6;UBERON:0001871!3.93e-08!7;UBERON:0000480!4.74e-08!626;UBERON:0000467!1.05e-07!625;UBERON:0000468!1.07e-07!659;UBERON:0000483!1.26e-07!309;UBERON:0001872!1.75e-07!5;UBERON:0002021!2.19e-07!5;UBERON:0000119!2.42e-07!312;UBERON:0002298!2.88e-07!8;UBERON:0000349!4.12e-07!5;UBERON:0001894!7.86e-07!7;UBERON:0006222!7.86e-07!7 | ||
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| ||
|short_description=p2@LRRTM2 | |short_description=p2@LRRTM2 | ||
}} | }} |
Latest revision as of 23:38, 24 September 2015
Short description: | p2@LRRTM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRTM2_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | 0bp_to_ENST00000274711, ENST00000521094_5end |
EntrezGene: | LRRTM2 |
HGNC: | 19409 |
UniProt: | O43300E5RHE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.90e-08 | 8 |
astrocyte of the cerebral cortex | 3.37e-07 | 3 |
neural cell | 5.18e-07 | 25 |