FFCP PHASE1:Hg19::chr19:8386339..8386351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6234 | |EntrezGene=6234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10418 | |HGNC=10418 | ||
|TSSclassifier=strong | |||
|UniProt=P62857,B4DEI1,B2R4R9 | |UniProt=P62857,B4DEI1,B2R4R9 | ||
|association_with_transcript=-32bp_to_ENST00000417088,ENST00000449223,NM_001031,uc002mjn.2_5end | |association_with_transcript=-32bp_to_ENST00000417088,ENST00000449223,NM_001031,uc002mjn.2_5end | ||
|cluster_id=chr19:8386339..8386351,+ | |||
|description=CAGE_peak_2_at_RPS28_5end | |description=CAGE_peak_2_at_RPS28_5end | ||
|id=chr19:8386339..8386351,+ | |id=chr19:8386339..8386351,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000746;5.86e-08;7!CL:1000612;5.86e-08;7!CL:0002188;1.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,9.21e-08,7;CL:1000612,9.21e-08,7;CL:0002188,9.66e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;5.86e-08;7!UBERON:0001229;5.86e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,9.21e-08,7;UBERON:0000074,9.21e-08,7;UBERON:0001229,9.21e-08,7;UBERON:0001230,9.21e-08,7;UBERON:0003220,9.21e-08,7;UBERON:0005749,9.21e-08,7;UBERON:0004199,9.21e-08,7;UBERON:0004209,9.21e-08,7;UBERON:0004198,9.21e-08,7;UBERON:0005103,9.87e-07,8;UBERON:0000083,9.87e-07,8;UBERON:0009201,9.87e-07,8;UBERON:0006553,9.87e-07,8;UBERON:0003074,9.87e-07,8;UBERON:0003060,9.87e-07,8 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,0,0.522371256399677,2.21160542851358,4.88460817580699,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0,0.975865597581014,0.61560529038394,0.612002073732759,0.313454721478088,0.572471974262113,1.23186982565596,0.627713197974014,0.305653622991805,0.164201178899891,0.629686250509434,0,0.383829398097213,0,0.919421224478927,1.50602959389125,0,0.387336002901508,0.426507697462265,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0.449446968890169,0,0,0.639337125799041,0,0,0.852449501065388,0.290209238628584,1.13477044938228,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0.450530678524519,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0.501559486172034,0.651844533267181,0.946895611469467,0,0.222820913770347,0.294605907474837,0,0,0.384273959177026,0.130059347559878,0.493313713811028,0.829050053357545,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.378139268656271,0.665188192387692,0.87834785693126,1.70272798147026,0.364295288292542,1.11235332835329,0.649094787309367,0,0,0,1.14398982156026,0,0.39752481473341,1.72046919021225,0.347140501607594,0.56530794192401,0,0.825354125820202,0.417989933073621,0.516833518338658,1.06729878806013,0.33472061276467,0.402829317109147,0.760272105718513,0.732186172644509,0,1.62028389576352,0.714397826272638,0.44905874525234,1.12611480483322,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,0.286836620748814,0.709336764396714,1.12135520028461,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0,0.576175924479999,0,0,1.1409436430889,0.298897361103602,0.352303495931295,0.647491777472526,0.561803226808994,0,0.245668634623536,0,1.18800285728205,0,0,0.718618141816238,0.168336113954066,0.500474079487857,0.277064115484183,0,0,0.45071417671979,1.02088964844019,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0.355009592516614,0,0.67824236924195,0.193260853163297,0.272746120590835,0.573609190778008,0.853815942907168,1.59035721985782,0.69716365721711,0.829288440122964,0.504641701751257,1.45990943630332,0,0.643240938192885,0,0.464367928031979,0,0.709840800239063,1.51726221070292,0.723033089650446,0.661763836394364,0.871517776369625,0.474541238222193,0.943819157121151,0.588664395376038,0.38474715694639,2.21446636387394,1.40241773803446,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0.185176890317059,0,4.15973914111831,0,0.115930404975077,0.117408694235822,0.433099343283221,1.38895653772983,0.570762456703795,0,0,0,0.234004265139238,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0,0.317489471460845,0,1.17217447210047,0,0.308482478109971,0.300343057843917,0.571652865261156,0.336393253036082,0,0.7333828582095,0,0,2.535908257668,0,0,1.02882949704857,0,1.5985330740966,0.285955987316295,1.08524321078289,1.64648067356154,0.977208552881205,0,1.58390374586686,0,0,0.399891964728228,0,0.502257091432126,2.10833939483032,0,0,0,0.868687840005475,0,0.358121926479791,0.336255431980582,0,0,0,0.254094624222463,0,1.54657762555539,0,1.27587750330633,0,0,0,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.391602314925481,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,3.33440328590885,0,0.30239029332968,0,0.460385919864187,0,0.384417447767103,0.511707249066704,0,0,0.925258162815933,0.177561725313127,0.410635780069046,0.519254429183621,0.348631135379878,0.120859449591622,0.802025881213139,0.276242966807689,0.229628896329213,0.182091168006717,0.131124414959424,0.451199612907412,0.539107359730903,0.784349769176855,2.92278449306521,0.316654886678627,1.13733384070897,0.850468526382578,1.51141141271498,3.08454505380579,0.270946437543853,1.00337954770971,0.764628819135115,0,0.895499018888713,0.438519753291869,0,1.28225062558195,0.328014645699706,0,0.206082023295445,0.640986253728404,0,0,0,0,0.096670718292122,0.924291702687866,1.07452572308291,1.51620229732984,0.429680979473094,0.870100163485371,1.10794615640931,0,0.495854746082934,0,0.127612712494584,0.2023155617111,0.929691098594572,0,0,0.308033580176089,0.532306030317022,0,0,0.429374660225974,0.744316738719335,0,0.190630193923825,1.02359116524534,0,0.636406495851874,0,0.539617372749944,0.54907405947211,0.706874414074119,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0.136499911407986,0,0,1.10273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|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,0,0.522371256399677,2.21160542851358,4.88460817580699,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0,0.975865597581014,0.61560529038394,0.612002073732759,0.313454721478088,0.572471974262113,1.23186982565596,0.627713197974014,0.305653622991805,0.164201178899891,0.629686250509434,0,0.383829398097213,0,0.919421224478927,1.50602959389125,0,0.387336002901508,0.426507697462265,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0.449446968890169,0,0,0.639337125799041,0,0,0.852449501065388,0.290209238628584,1.13477044938228,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0.450530678524519,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0.501559486172034,0.651844533267181,0.946895611469467,0,0.222820913770347,0.294605907474837,0,0,0.384273959177026,0.130059347559878,0.493313713811028,0.829050053357545,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.378139268656271,0.665188192387692,0.87834785693126,1.70272798147026,0.364295288292542,1.11235332835329,0.649094787309367,0,0,0,1.14398982156026,0,0.39752481473341,1.72046919021225,0.347140501607594,0.56530794192401,0,0.825354125820202,0.417989933073621,0.516833518338658,1.06729878806013,0.33472061276467,0.402829317109147,0.760272105718513,0.732186172644509,0,1.62028389576352,0.714397826272638,0.44905874525234,1.12611480483322,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,0.286836620748814,0.709336764396714,1.12135520028461,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0,0.576175924479999,0,0,1.1409436430889,0.298897361103602,0.352303495931295,0.647491777472526,0.561803226808994,0,0.245668634623536,0,1.18800285728205,0,0,0.718618141816238,0.168336113954066,0.500474079487857,0.277064115484183,0,0,0.45071417671979,1.02088964844019,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0.355009592516614,0,0.67824236924195,0.193260853163297,0.272746120590835,0.573609190778008,0.853815942907168,1.59035721985782,0.69716365721711,0.829288440122964,0.504641701751257,1.45990943630332,0,0.643240938192885,0,0.464367928031979,0,0.709840800239063,1.51726221070292,0.723033089650446,0.661763836394364,0.871517776369625,0.474541238222193,0.943819157121151,0.588664395376038,0.38474715694639,2.21446636387394,1.40241773803446,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0.185176890317059,0,4.15973914111831,0,0.115930404975077,0.117408694235822,0.433099343283221,1.38895653772983,0.570762456703795,0,0,0,0.234004265139238,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0,0.317489471460845,0,1.17217447210047,0,0.308482478109971,0.300343057843917,0.571652865261156,0.336393253036082,0,0.7333828582095,0,0,2.535908257668,0,0,1.02882949704857,0,1.5985330740966,0.285955987316295,1.08524321078289,1.64648067356154,0.977208552881205,0,1.58390374586686,0,0,0.399891964728228,0,0.502257091432126,2.10833939483032,0,0,0,0.868687840005475,0,0.358121926479791,0.336255431980582,0,0,0,0.254094624222463,0,1.54657762555539,0,1.27587750330633,0,0,0,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.391602314925481,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,3.33440328590885,0,0.30239029332968,0,0.460385919864187,0,0.384417447767103,0.511707249066704,0,0,0.925258162815933,0.177561725313127,0.410635780069046,0.519254429183621,0.348631135379878,0.120859449591622,0.802025881213139,0.276242966807689,0.229628896329213,0.182091168006717,0.131124414959424,0.451199612907412,0.539107359730903,0.784349769176855,2.92278449306521,0.316654886678627,1.13733384070897,0.850468526382578,1.51141141271498,3.08454505380579,0.270946437543853,1.00337954770971,0.764628819135115,0,0.895499018888713,0.438519753291869,0,1.28225062558195,0.328014645699706,0,0.206082023295445,0.640986253728404,0,0,0,0,0.096670718292122,0.924291702687866,1.07452572308291,1.51620229732984,0.429680979473094,0.870100163485371,1.10794615640931,0,0.495854746082934,0,0.127612712494584,0.2023155617111,0.929691098594572,0,0,0.308033580176089,0.532306030317022,0,0,0.429374660225974,0.744316738719335,0,0.190630193923825,1.02359116524534,0,0.636406495851874,0,0.539617372749944,0.54907405947211,0.706874414074119,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0.136499911407986,0,0,1.10273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| ||
|short_description=p2@RPS28 | |short_description=p2@RPS28 | ||
}} | }} |
Latest revision as of 23:52, 24 September 2015
Short description: | p2@RPS28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS28_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000417088, ENST00000449223, NM_001031, uc002mjn.2_5end |
EntrezGene: | RPS28 |
HGNC: | 10418 |
UniProt: | P62857B4DEI1B2R4R9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 9.21e-08 | 7 |
kidney corpuscule cell | 9.21e-08 | 7 |
glomerular endothelial cell | 9.66e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 9.21e-08 | 7 |
renal glomerulus | 9.21e-08 | 7 |
renal corpuscle | 9.21e-08 | 7 |
glomerular capsule | 9.21e-08 | 7 |
metanephric mesenchyme | 9.21e-08 | 7 |
glomerular tuft | 9.21e-08 | 7 |
S-shaped body | 9.21e-08 | 7 |
renal vesicle | 9.21e-08 | 7 |
comma-shaped body | 9.21e-08 | 7 |
mesonephric epithelium | 9.87e-07 | 8 |
mesonephric tubule | 9.87e-07 | 8 |
nephric duct | 9.87e-07 | 8 |
renal duct | 9.87e-07 | 8 |
mesonephric duct | 9.87e-07 | 8 |
pronephric duct | 9.87e-07 | 8 |