FFCP PHASE1:Hg19::chr3:139258363..139258374,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5947 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9919 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=296bp_to_uc010huj.2_5end | |||
|cluster_id=chr3:139258363..139258374,- | |||
|coexpression_cluster_id=C1921 | |||
|description=CAGE_peak_4_at_RBP1_5end | |||
|id=chr3:139258363..139258374,- | |||
|ontology_enrichment_celltype=CL:0000128!7.68e-07!7;CL:0000126!7.68e-07!7;CL:0000127!7.68e-07!7;CL:0002453!7.68e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;3.23e-11;7!CL:0000126;3.23e-11;7!CL:0000127;3.23e-11;7!CL:1000507;2.78e-08;10!CL:1000494;2.78e-08;10!CL:0002319;1.42e-07;25!CL:0000669;4.07e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.17e-11,7;CL:0000126,2.17e-11,7;CL:0000127,2.17e-11,7;CL:0002453,2.17e-11,7;CL:1000507,2.34e-08,10;CL:1000494,2.34e-08,10;CL:0002319,1.02e-07,25;CL:0000669,3.44e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.24e-21!347;UBERON:0005743!2.10e-19!86;UBERON:0000073!5.20e-19!94;UBERON:0001016!5.20e-19!94;UBERON:0000119!1.02e-18!312;UBERON:0000483!7.15e-18!309;UBERON:0000033!9.07e-18!123;UBERON:0002346!3.68e-17!90;UBERON:0000153!3.91e-17!129;UBERON:0007811!3.91e-17!129;UBERON:0001017!4.90e-17!82;UBERON:0003075!5.61e-17!86;UBERON:0007284!5.61e-17!86;UBERON:0000924!1.91e-15!173;UBERON:0006601!1.91e-15!173;UBERON:0000477!3.54e-15!286;UBERON:0000922!3.64e-15!612;UBERON:0004121!4.08e-15!169;UBERON:0004111!4.75e-15!241;UBERON:0000475!1.32e-14!365;UBERON:0002616!8.30e-14!59;UBERON:0000955!8.35e-14!69;UBERON:0006238!8.35e-14!69;UBERON:0002050!9.78e-14!605;UBERON:0005423!9.78e-14!605;UBERON:0000923!2.34e-13!604;UBERON:0005291!2.34e-13!604;UBERON:0006598!2.34e-13!604;UBERON:0002532!2.34e-13!604;UBERON:0000025!6.31e-13!194;UBERON:0000468!8.23e-13!659;UBERON:0001049!2.50e-12!57;UBERON:0005068!2.50e-12!57;UBERON:0006241!2.50e-12!57;UBERON:0007135!2.50e-12!57;UBERON:0007023!6.21e-12!115;UBERON:0000467!4.10e-11!625;UBERON:0000480!5.71e-11!626;UBERON:0003056!8.84e-11!61;UBERON:0000062!2.91e-09!511;UBERON:0005256!1.03e-08!143;UBERON:0004732!1.52e-08!13;UBERON:0007625!2.21e-08!11;UBERON:0003076!6.31e-08!15;UBERON:0003057!6.31e-08!15;UBERON:0004733!7.80e-08!12;UBERON:0002028!7.80e-08!12;UBERON:0007277!7.80e-08!12;UBERON:0000064!1.42e-07!219;UBERON:0002780!3.67e-07!41;UBERON:0001890!3.67e-07!41;UBERON:0006240!3.67e-07!41;UBERON:0001032!3.91e-07!24;UBERON:0004456!3.91e-07!24;UBERON:0003886!4.00e-07!63;UBERON:0002553!4.60e-07!70;UBERON:0001048!4.68e-07!168;UBERON:0003104!8.42e-07!238;UBERON:0009142!8.42e-07!238;UBERON:0003080!8.95e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;8.50e-15;11!UBERON:0001032;1.96e-12;24!UBERON:0004456;1.96e-12;24!UBERON:0000020;2.52e-11;23!UBERON:0002104;3.46e-11;21!UBERON:0000970;4.46e-10;20!UBERON:0000019;4.97e-09;19!UBERON:0000047;4.97e-09;19!UBERON:0004088;4.97e-09;19!UBERON:0010230;4.97e-09;19!UBERON:0004732;1.05e-08;13!UBERON:0004211;2.78e-08;10!UBERON:0009773;2.78e-08;10!UBERON:0001231;2.78e-08;10!UBERON:0004810;2.78e-08;10!UBERON:0006876;4.70e-08;11!UBERON:0000488;4.84e-08;4!UBERON:0001456;7.03e-08;21!UBERON:0004733;1.53e-07;12!UBERON:0002028;1.53e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.20e-15,86;UBERON:0007625,7.04e-15,11;UBERON:0003075,2.01e-14,82;UBERON:0007284,2.01e-14,82;UBERON:0004121,1.04e-12,171;UBERON:0000924,1.04e-12,171;UBERON:0006601,1.04e-12,171;UBERON:0000020,1.76e-12,24;UBERON:0001032,1.76e-12,24;UBERON:0004456,1.76e-12,24;UBERON:0010371,2.23e-11,104;UBERON:0000970,3.03e-11,21;UBERON:0002104,3.03e-11,21;UBERON:0001017,8.29e-11,81;UBERON:0001016,1.38e-10,89;UBERON:0000019,3.63e-10,20;UBERON:0000047,3.63e-10,20;UBERON:0010312,3.63e-10,20;UBERON:0004088,3.63e-10,20;UBERON:0010230,3.63e-10,20;UBERON:0003072,3.63e-10,20;UBERON:0004128,3.63e-10,20;UBERON:0003071,3.63e-10,20;UBERON:0010314,2.35e-09,132;UBERON:0001456,6.31e-09,22;UBERON:0004732,7.63e-09,13;UBERON:0003076,1.06e-08,15;UBERON:0003057,1.06e-08,15;UBERON:0003056,1.98e-08,61;UBERON:0004810,2.34e-08,10;UBERON:0000955,4.00e-08,68;UBERON:0006238,4.00e-08,68;UBERON:0000488,4.95e-08,4;UBERON:0006876,5.22e-08,11;UBERON:0000119,5.84e-08,309;UBERON:0000033,8.31e-08,56;UBERON:0000483,1.08e-07,306;UBERON:0004733,1.13e-07,12;UBERON:0002028,1.13e-07,12;UBERON:0007277,1.13e-07,12;UBERON:0000922,2.38e-07,592;UBERON:0011216,3.99e-07,223;UBERON:0001049,4.17e-07,56;UBERON:0005068,4.17e-07,56;UBERON:0006241,4.17e-07,56;UBERON:0007135,4.17e-07,56;UBERON:0001781,6.79e-07,4;UBERON:0000966,8.09e-07,6;UBERON:0005388,8.09e-07,6;UBERON:0001802,8.09e-07,6 | |||
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| |||
|short_description=p4@RBP1 | |||
}} |
Latest revision as of 02:00, 25 September 2015
Short description: | p4@RBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBP1_5end |
Coexpression cluster: | C1921_small_Renal_Ciliary_Astrocyte_Lens_Meningeal_maxillary |
Association with transcript: | 296bp_to_uc010huj.2_5end |
EntrezGene: | RBP1 |
HGNC: | 9919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.17e-11 | 7 |
macroglial cell | 2.17e-11 | 7 |
astrocyte | 2.17e-11 | 7 |
oligodendrocyte precursor cell | 2.17e-11 | 7 |
kidney tubule cell | 2.34e-08 | 10 |
nephron tubule epithelial cell | 2.34e-08 | 10 |
neural cell | 1.02e-07 | 25 |
pericyte cell | 3.44e-07 | 4 |