FFCP PHASE1:Hg19::chr3:139258363..139258374,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:139258363..139258374,- to FFCP PHASE1:Hg19::chr3:139258363..139258374,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5947 | |EntrezGene=5947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9919 | |HGNC=9919 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=296bp_to_uc010huj.2_5end | |||
|cluster_id=chr3:139258363..139258374,- | |||
|coexpression_cluster_id=C1921 | |||
|description=CAGE_peak_4_at_RBP1_5end | |||
|id=chr3:139258363..139258374,- | |||
|ontology_enrichment_celltype=CL:0000128!7.68e-07!7;CL:0000126!7.68e-07!7;CL:0000127!7.68e-07!7;CL:0002453!7.68e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;3.23e-11;7!CL:0000126;3.23e-11;7!CL:0000127;3.23e-11;7!CL:1000507;2.78e-08;10!CL:1000494;2.78e-08;10!CL:0002319;1.42e-07;25!CL:0000669;4.07e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.17e-11,7;CL:0000126,2.17e-11,7;CL:0000127,2.17e-11,7;CL:0002453,2.17e-11,7;CL:1000507,2.34e-08,10;CL:1000494,2.34e-08,10;CL:0002319,1.02e-07,25;CL:0000669,3.44e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.24e-21!347;UBERON:0005743!2.10e-19!86;UBERON:0000073!5.20e-19!94;UBERON:0001016!5.20e-19!94;UBERON:0000119!1.02e-18!312;UBERON:0000483!7.15e-18!309;UBERON:0000033!9.07e-18!123;UBERON:0002346!3.68e-17!90;UBERON:0000153!3.91e-17!129;UBERON:0007811!3.91e-17!129;UBERON:0001017!4.90e-17!82;UBERON:0003075!5.61e-17!86;UBERON:0007284!5.61e-17!86;UBERON:0000924!1.91e-15!173;UBERON:0006601!1.91e-15!173;UBERON:0000477!3.54e-15!286;UBERON:0000922!3.64e-15!612;UBERON:0004121!4.08e-15!169;UBERON:0004111!4.75e-15!241;UBERON:0000475!1.32e-14!365;UBERON:0002616!8.30e-14!59;UBERON:0000955!8.35e-14!69;UBERON:0006238!8.35e-14!69;UBERON:0002050!9.78e-14!605;UBERON:0005423!9.78e-14!605;UBERON:0000923!2.34e-13!604;UBERON:0005291!2.34e-13!604;UBERON:0006598!2.34e-13!604;UBERON:0002532!2.34e-13!604;UBERON:0000025!6.31e-13!194;UBERON:0000468!8.23e-13!659;UBERON:0001049!2.50e-12!57;UBERON:0005068!2.50e-12!57;UBERON:0006241!2.50e-12!57;UBERON:0007135!2.50e-12!57;UBERON:0007023!6.21e-12!115;UBERON:0000467!4.10e-11!625;UBERON:0000480!5.71e-11!626;UBERON:0003056!8.84e-11!61;UBERON:0000062!2.91e-09!511;UBERON:0005256!1.03e-08!143;UBERON:0004732!1.52e-08!13;UBERON:0007625!2.21e-08!11;UBERON:0003076!6.31e-08!15;UBERON:0003057!6.31e-08!15;UBERON:0004733!7.80e-08!12;UBERON:0002028!7.80e-08!12;UBERON:0007277!7.80e-08!12;UBERON:0000064!1.42e-07!219;UBERON:0002780!3.67e-07!41;UBERON:0001890!3.67e-07!41;UBERON:0006240!3.67e-07!41;UBERON:0001032!3.91e-07!24;UBERON:0004456!3.91e-07!24;UBERON:0003886!4.00e-07!63;UBERON:0002553!4.60e-07!70;UBERON:0001048!4.68e-07!168;UBERON:0003104!8.42e-07!238;UBERON:0009142!8.42e-07!238;UBERON:0003080!8.95e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;8.50e-15;11!UBERON:0001032;1.96e-12;24!UBERON:0004456;1.96e-12;24!UBERON:0000020;2.52e-11;23!UBERON:0002104;3.46e-11;21!UBERON:0000970;4.46e-10;20!UBERON:0000019;4.97e-09;19!UBERON:0000047;4.97e-09;19!UBERON:0004088;4.97e-09;19!UBERON:0010230;4.97e-09;19!UBERON:0004732;1.05e-08;13!UBERON:0004211;2.78e-08;10!UBERON:0009773;2.78e-08;10!UBERON:0001231;2.78e-08;10!UBERON:0004810;2.78e-08;10!UBERON:0006876;4.70e-08;11!UBERON:0000488;4.84e-08;4!UBERON:0001456;7.03e-08;21!UBERON:0004733;1.53e-07;12!UBERON:0002028;1.53e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.20e-15,86;UBERON:0007625,7.04e-15,11;UBERON:0003075,2.01e-14,82;UBERON:0007284,2.01e-14,82;UBERON:0004121,1.04e-12,171;UBERON:0000924,1.04e-12,171;UBERON:0006601,1.04e-12,171;UBERON:0000020,1.76e-12,24;UBERON:0001032,1.76e-12,24;UBERON:0004456,1.76e-12,24;UBERON:0010371,2.23e-11,104;UBERON:0000970,3.03e-11,21;UBERON:0002104,3.03e-11,21;UBERON:0001017,8.29e-11,81;UBERON:0001016,1.38e-10,89;UBERON:0000019,3.63e-10,20;UBERON:0000047,3.63e-10,20;UBERON:0010312,3.63e-10,20;UBERON:0004088,3.63e-10,20;UBERON:0010230,3.63e-10,20;UBERON:0003072,3.63e-10,20;UBERON:0004128,3.63e-10,20;UBERON:0003071,3.63e-10,20;UBERON:0010314,2.35e-09,132;UBERON:0001456,6.31e-09,22;UBERON:0004732,7.63e-09,13;UBERON:0003076,1.06e-08,15;UBERON:0003057,1.06e-08,15;UBERON:0003056,1.98e-08,61;UBERON:0004810,2.34e-08,10;UBERON:0000955,4.00e-08,68;UBERON:0006238,4.00e-08,68;UBERON:0000488,4.95e-08,4;UBERON:0006876,5.22e-08,11;UBERON:0000119,5.84e-08,309;UBERON:0000033,8.31e-08,56;UBERON:0000483,1.08e-07,306;UBERON:0004733,1.13e-07,12;UBERON:0002028,1.13e-07,12;UBERON:0007277,1.13e-07,12;UBERON:0000922,2.38e-07,592;UBERON:0011216,3.99e-07,223;UBERON:0001049,4.17e-07,56;UBERON:0005068,4.17e-07,56;UBERON:0006241,4.17e-07,56;UBERON:0007135,4.17e-07,56;UBERON:0001781,6.79e-07,4;UBERON:0000966,8.09e-07,6;UBERON:0005388,8.09e-07,6;UBERON:0001802,8.09e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,1.05506791291381,0.495065411840187,0.662794751455832,0,0,0,0,23.0236378603593,12.8520435483879,28.2109249330279,7.15589967827642,3.55873505189499,1.75759695432724,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,10.0605128955545,0.511450247374121,0,0,0,0,0,55.3028680409797,57.8713727377292,56.3020976292938,0.458426764241994,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0.872188104285069,0,0.886413581652058,0.132409180813219,1.43418310374407,3.90135220418193,0,0,0.98667019366864,0.622422070799533,0.134710672069688,0.163461903113459,2.4217188423189,1.15235184896,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89891279744945,1.36373060295417,1.14721838155602,0.365921118388786,0,1.39432731443422,4.04278114559945,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,7.3504355692771,0,0,4.13552934676983,0,0,12.3528823414938,0,0,0.100528972411631,0.833296006426766,0,0,30.3095818253074,45.9084403701304,29.3521735589554,1.15493158208859,0.925971025153221,2.47330397904978,0,0,0.246217006087397,0,0.148631162288728,1.87467667973554,0.503946384596579,1.70130116690864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,30.9531648871629,0.5867062865676,0.904902010304444,0,0,0.531876233169741,0,0,0,0,2.57360388584666,3.7983512377401,0,0,2.84313558994037,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0.508189248444927,0,3.09315525111078,1.50764638800914,3.18969375826582,0,0,0,0.36807447515742,1.50051156317903,0,0,0.178428988797162,0,0,0,0,0,0,0.737476674166813,0,2.54541504701563,7.89229874764969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,1.20303882181971,0.828728900423067,1.60740227430449,0.364182336013434,0.786746489756545,3.15839729035188,1.5403067420883,1.56869953835371,2.92278449306521,1.37217117560738,0,0,0.431831832204279,0,4.87703587578935,13.545623894081,0,0.831076008928724,2.23874754722178,0,0,10.2580050046556,7.54433685109323,1.62689197332152,1.13345112812495,0,0,0.574265537996172,0,0,5.80024309752732,0.154048617114644,1.07452572308291,0.964856007391714,0.322260734604821,0.145016693914229,0.596586391912706,17.1831828798203,0,0.192190067365106,0.127612712494584,0.4046311234222,3.71876439437829,0.94443704049192,0.6970372701606,0,0,0.869932992075073,0,0.286249773483982,1.48863347743867,1.58189712359363,0.190630193923825,0.511795582622668,1.28381696410176,0.318203247925937,0,0.899362287916574,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,0,0,0.9554993798559,0.989838023675989,0,1.10273068709225,0,0,0,0,0,0.92947049429925,0.281695602532241,0,0.0982490410131212,0,1.06428319221179,0.211107635297664,0,0,0,0.288666338176536,0.670302275535787,0,0.659006605437454,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,1.13654458722565,0,0,0,0,0.422008249231538,0.222617410045812,0,0.211125408127993,0.398495976502139,0.552567831062295,0,4.70435939509912,0,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0.556608588971108,0,0,0,0,0.796554137998498,0,0,0,0,0,0.885741385813839,0.482385754501632,3.05163472634166,0.552896299656123,0.591095237907095,0.438770794307945,0,0,0.307801034015188,0.227884111694002,0,0,0,5.42301971544263,0.824378340616761,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21322039365219,2.40773294189637,1.63985112007737,0,0.19566461893209,0,0.394584402849391,0,0.61214552326098,0.442306057399416,0,0,0,0,0.313932918407225,1.19472429772959,0.284609546029793,0,0,4.60564267847575,0.435296032902013,1.22308667769421,3.26773461696071,0,0,0,0.0969890164884194,0,3.38971111170799,0,0,0.316553979779393,0.391102765469606,0.961905843018405,5.33632486848381,1.39866726707491,0,0,0.686379991447858,0,0,0.471388069233591,0.135904206073614,0,0,1.44475294950759,1.80126086612937,0.410716136675979,0,0,0,1.67569440763353,1.3749625440701,0.717873024576814,0.199679000498991,0.429226048136571,0,0.335917362433631,0,0,0.315132729228895,0.0824158583811665,0.337017719270924,0.688992370603241,0,1.59045937961861,0.136203406111576,1.76828463311521,0.275078873194468,1.24632101408756,0,0,0.182248669974074,0,0.0788057072991982,0.786818822024972,0,0,0.767660789277781,0,0.662091970365432,0,0,0,0,0,0,0,1.01980882368113,0.439656701034247,0,2.45637617086946,0.39669780522807,0,0,0.320362237703084,0.314408610199332,0,0,0,0,5.74507131993164,0,0.7520696820681,0,0,14.763085047522,0,1.09823638411767,0.250381861413,12.6150023051816,2.5513681853476,1.98708489412427,0.138348634936231,1.6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| ||
|short_description=p4@RBP1 | |||
}} | }} |
Latest revision as of 02:00, 25 September 2015
Short description: | p4@RBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBP1_5end |
Coexpression cluster: | C1921_small_Renal_Ciliary_Astrocyte_Lens_Meningeal_maxillary |
Association with transcript: | 296bp_to_uc010huj.2_5end |
EntrezGene: | RBP1 |
HGNC: | 9919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.17e-11 | 7 |
macroglial cell | 2.17e-11 | 7 |
astrocyte | 2.17e-11 | 7 |
oligodendrocyte precursor cell | 2.17e-11 | 7 |
kidney tubule cell | 2.34e-08 | 10 |
nephron tubule epithelial cell | 2.34e-08 | 10 |
neural cell | 1.02e-07 | 25 |
pericyte cell | 3.44e-07 | 4 |