FFCP PHASE2:Hg19::chr19:1067342..1067353,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23526 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:17102 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17102 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F5H4A3 | ||
|association_with_transcript=26bp_to_ENST00000536472_5end | |association_with_transcript=26bp_to_ENST00000536472_5end | ||
|cluster_id=chr19:1067342..1067353,+ | |cluster_id=chr19:1067342..1067353,+ |
Latest revision as of 02:04, 25 September 2015
Short description: | p8@HMHA1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HMHA1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 26bp_to_ENST00000536472_5end |
EntrezGene: | HMHA1 |
HGNC: | 17102 |
UniProt: | F5H4A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@HMHA1 |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.77e-69 | 136 |
nongranular leukocyte | 3.38e-61 | 115 |
classical monocyte | 5.23e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.23e-60 | 42 |
hematopoietic stem cell | 1.23e-58 | 168 |
hematopoietic oligopotent progenitor cell | 9.10e-55 | 161 |
hematopoietic multipotent progenitor cell | 9.10e-55 | 161 |
hematopoietic cell | 1.71e-54 | 177 |
defensive cell | 1.69e-53 | 48 |
phagocyte | 1.69e-53 | 48 |
Showing 1 to 10 of 46 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.56e-42 | 98 |
blood island | 1.56e-42 | 98 |
hemolymphoid system | 1.20e-38 | 108 |
bone marrow | 1.25e-33 | 76 |
bone element | 3.12e-30 | 82 |
immune system | 2.86e-29 | 93 |
skeletal element | 2.05e-26 | 90 |
skeletal system | 1.62e-22 | 100 |
connective tissue | 2.46e-14 | 371 |
lateral plate mesoderm | 2.88e-13 | 203 |
Showing 1 to 10 of 14 entries