FFCP PHASE1:Hg19::chr19:10736157..10736169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57153 | |EntrezGene=57153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17292 | |HGNC=17292 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWA5 | |UniProt=Q8IWA5 | ||
|association_with_transcript=-1bp_to_ENST00000335757,NM_020428,uc002mpf.2_5end | |association_with_transcript=-1bp_to_ENST00000335757,NM_020428,uc002mpf.2_5end | ||
|cluster_id=chr19:10736157..10736169,+ | |||
|coexpression_cluster_id=C3745 | |coexpression_cluster_id=C3745 | ||
|description=CAGE_peak_4_at_SLC44A2_5end | |description=CAGE_peak_4_at_SLC44A2_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.34e-24!254;CL:0002076!2.18e-08!43;CL:0002321!1.62e-07!248;CL:0000077!4.30e-07!19;CL:0000220!4.51e-07!246;CL:0000076!6.71e-07!62;CL:0000223!8.54e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.34e-24!254;CL:0002076!2.18e-08!43;CL:0002321!1.62e-07!248;CL:0000077!4.30e-07!19;CL:0000220!4.51e-07!246;CL:0000076!6.71e-07!62;CL:0000223!8.54e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.85e-09;19!CL:0000039;9.40e-08;7!CL:0000586;9.40e-08;7!CL:0002076;9.06e-07;42 | |ontology_enrichment_celltype_v019=CL:0000349;1.85e-09;19!CL:0000039;9.40e-08;7!CL:0000586;9.40e-08;7!CL:0002076;9.06e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.36e-22,253;CL:0000349,2.03e-09,19;CL:0002076,1.20e-07,42;CL:0000039,2.30e-07,7;CL:0000586,2.30e-07,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.09e-12!106;DOID:0050687!8.62e-12!143 | |ontology_enrichment_disease=DOID:305!1.09e-12!106;DOID:0050687!8.62e-12!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.46e-10,143;DOID:305,4.73e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.66e-16!169;UBERON:0000925!4.66e-16!169;UBERON:0006595!4.66e-16!169;UBERON:0001007!5.55e-11!155;UBERON:0001555!5.55e-11!155;UBERON:0007026!5.55e-11!155;UBERON:0003104!1.83e-10!238;UBERON:0009142!1.83e-10!238;UBERON:0000481!2.46e-10!347;UBERON:0002100!4.42e-10!216;UBERON:0000077!7.13e-10!130;UBERON:0000064!9.32e-10!219;UBERON:0000468!2.47e-09!659;UBERON:0005911!2.47e-09!82;UBERON:0001004!3.03e-09!72;UBERON:0000475!5.31e-09!365;UBERON:0005156!6.65e-09!59;UBERON:0000990!6.65e-09!59;UBERON:0000065!7.48e-09!53;UBERON:0008947!1.71e-08!38;UBERON:0003258!1.71e-08!38;UBERON:0009569!3.24e-08!113;UBERON:0000464!9.67e-08!104;UBERON:0005153!9.80e-08!37;UBERON:0005157!1.69e-07!51;UBERON:0004921!1.78e-07!129;UBERON:0004185!1.78e-07!129;UBERON:0005631!2.89e-07!14;UBERON:0000158!2.89e-07!14;UBERON:0000915!3.51e-07!52;UBERON:0003101!4.55e-07!22;UBERON:0000079!4.55e-07!22;UBERON:0000466!5.33e-07!126;UBERON:0000062!5.48e-07!511;UBERON:0003133!6.37e-07!48;UBERON:0000072!6.84e-07!46 | |ontology_enrichment_uberon=UBERON:0004119!4.66e-16!169;UBERON:0000925!4.66e-16!169;UBERON:0006595!4.66e-16!169;UBERON:0001007!5.55e-11!155;UBERON:0001555!5.55e-11!155;UBERON:0007026!5.55e-11!155;UBERON:0003104!1.83e-10!238;UBERON:0009142!1.83e-10!238;UBERON:0000481!2.46e-10!347;UBERON:0002100!4.42e-10!216;UBERON:0000077!7.13e-10!130;UBERON:0000064!9.32e-10!219;UBERON:0000468!2.47e-09!659;UBERON:0005911!2.47e-09!82;UBERON:0001004!3.03e-09!72;UBERON:0000475!5.31e-09!365;UBERON:0005156!6.65e-09!59;UBERON:0000990!6.65e-09!59;UBERON:0000065!7.48e-09!53;UBERON:0008947!1.71e-08!38;UBERON:0003258!1.71e-08!38;UBERON:0009569!3.24e-08!113;UBERON:0000464!9.67e-08!104;UBERON:0005153!9.80e-08!37;UBERON:0005157!1.69e-07!51;UBERON:0004921!1.78e-07!129;UBERON:0004185!1.78e-07!129;UBERON:0005631!2.89e-07!14;UBERON:0000158!2.89e-07!14;UBERON:0000915!3.51e-07!52;UBERON:0003101!4.55e-07!22;UBERON:0000079!4.55e-07!22;UBERON:0000466!5.33e-07!126;UBERON:0000062!5.48e-07!511;UBERON:0003133!6.37e-07!48;UBERON:0000072!6.84e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.89e-09;10!UBERON:0000158;2.89e-09;10!UBERON:0000478;2.95e-08;24!UBERON:0000486;7.18e-07;12!UBERON:0001987;7.88e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.89e-09;10!UBERON:0000158;2.89e-09;10!UBERON:0000478;2.95e-08;24!UBERON:0000486;7.18e-07;12!UBERON:0001987;7.88e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.47e-14,14;UBERON:0000158,3.47e-14,14;UBERON:0003124,9.34e-11,7;UBERON:0004119,1.05e-09,160;UBERON:0000925,1.05e-09,160;UBERON:0006595,1.05e-09,160;UBERON:0000478,3.22e-08,24;UBERON:0001008,1.03e-07,48;UBERON:0006554,3.71e-07,47;UBERON:0001987,6.77e-07,4;UBERON:0004340,6.77e-07,4 | |||
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| ||
|short_description=p4@SLC44A2 | |short_description=p4@SLC44A2 | ||
}} | }} |
Latest revision as of 02:24, 25 September 2015
Short description: | p4@SLC44A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC44A2_5end |
Coexpression cluster: | C3745_Alveolar_Renal_Placental_Amniotic_amniotic_choriocarcinoma_pancreatic |
Association with transcript: | -1bp_to_ENST00000335757, NM_020428, uc002mpf.2_5end |
EntrezGene: | SLC44A2 |
HGNC: | 17292 |
UniProt: | Q8IWA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.36e-22 | 253 |
extraembryonic cell | 2.03e-09 | 19 |
endo-epithelial cell | 1.20e-07 | 42 |
germ line cell | 2.30e-07 | 7 |
germ cell | 2.30e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.47e-14 | 14 |
membranous layer | 3.47e-14 | 14 |
chorion | 9.34e-11 | 7 |
endoderm-derived structure | 1.05e-09 | 160 |
endoderm | 1.05e-09 | 160 |
presumptive endoderm | 1.05e-09 | 160 |
extraembryonic structure | 3.22e-08 | 24 |
renal system | 1.03e-07 | 48 |
urinary system structure | 3.71e-07 | 47 |
placenta | 6.77e-07 | 4 |
allantois | 6.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.46e-10 | 143 |
carcinoma | 4.73e-09 | 106 |