FFCP PHASE1:Hg19::chr19:10736183..10736247,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57153 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17292 | |||
|TSSclassifier=strong | |||
|UniProt=E7ETY3 | |||
|association_with_transcript=0bp_to_ENST00000380614_5end | |||
|cluster_id=chr19:10736183..10736247,+ | |||
|coexpression_cluster_id=C3745 | |||
|description=CAGE_peak_2_at_SLC44A2_5end | |||
|id=chr19:10736183..10736247,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.35e-17!254;CL:0002076!1.76e-10!43;CL:0002321!2.02e-07!248;CL:0000220!3.60e-07!246;CL:0002368!9.14e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.60e-08;42!CL:0000349;9.08e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.19e-16,253;CL:0002076,2.11e-10,42;CL:0000349,8.28e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.33e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.45e-22!365;UBERON:0000481!4.18e-21!347;UBERON:0000468!7.60e-18!659;UBERON:0004119!1.09e-17!169;UBERON:0000925!1.09e-17!169;UBERON:0006595!1.09e-17!169;UBERON:0000064!3.26e-15!219;UBERON:0003104!1.80e-14!238;UBERON:0009142!1.80e-14!238;UBERON:0000467!1.86e-13!625;UBERON:0002100!2.45e-13!216;UBERON:0000480!3.57e-13!626;UBERON:0000483!2.54e-12!309;UBERON:0001007!2.92e-12!155;UBERON:0001555!2.92e-12!155;UBERON:0007026!2.92e-12!155;UBERON:0000062!4.68e-12!511;UBERON:0000922!5.03e-12!612;UBERON:0000119!7.79e-12!312;UBERON:0002050!8.13e-11!605;UBERON:0005423!8.13e-11!605;UBERON:0000923!1.44e-10!604;UBERON:0005291!1.44e-10!604;UBERON:0006598!1.44e-10!604;UBERON:0002532!1.44e-10!604;UBERON:0001004!2.35e-10!72;UBERON:0000464!6.47e-10!104;UBERON:0000077!1.89e-09!130;UBERON:0004111!2.49e-09!241;UBERON:0000477!6.97e-09!286;UBERON:0005631!8.60e-09!14;UBERON:0000158!8.60e-09!14;UBERON:0009569!1.38e-08!113;UBERON:0000466!2.49e-08!126;UBERON:0004921!2.69e-08!129;UBERON:0004185!2.69e-08!129;UBERON:0004121!3.07e-08!169;UBERON:0000915!4.45e-08!52;UBERON:0005157!1.47e-07!51;UBERON:0000161!1.86e-07!35;UBERON:0005177!2.32e-07!107;UBERON:0000924!3.00e-07!173;UBERON:0006601!3.00e-07!173;UBERON:0001008!3.24e-07!45;UBERON:0006554!4.06e-07!44;UBERON:0000065!4.79e-07!53;UBERON:0005256!5.08e-07!143;UBERON:0005156!5.87e-07!59;UBERON:0000990!5.87e-07!59;UBERON:0005911!7.84e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.30e-17,160;UBERON:0000925,2.30e-17,160;UBERON:0006595,2.30e-17,160;UBERON:0001007,7.98e-12,145;UBERON:0001555,7.98e-12,145;UBERON:0007026,7.98e-12,145;UBERON:0000483,4.01e-11,306;UBERON:0000119,1.43e-10,309;UBERON:0002100,1.49e-10,199;UBERON:0000922,1.62e-10,592;UBERON:0001004,2.12e-10,74;UBERON:0005423,9.35e-10,581;UBERON:0011216,2.02e-09,223;UBERON:0001008,2.95e-09,48;UBERON:0006554,3.67e-09,47;UBERON:0005631,7.40e-09,14;UBERON:0000158,7.40e-09,14;UBERON:0004111,3.08e-08,240;UBERON:0004921,9.51e-08,118;UBERON:0009569,1.05e-07,112;UBERON:0000915,1.18e-07,52;UBERON:0000161,1.27e-07,36;UBERON:0004923,1.66e-07,66;UBERON:0002050,1.75e-07,564;UBERON:0003102,2.72e-07,99;UBERON:0004121,3.74e-07,171;UBERON:0000924,3.74e-07,171;UBERON:0006601,3.74e-07,171;UBERON:0005156,5.54e-07,59;UBERON:0000990,5.54e-07,59;UBERON:0000065,5.91e-07,54;UBERON:0005157,5.92e-07,47 | |||
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| |||
|short_description=p2@SLC44A2 | |||
}} |
Latest revision as of 02:24, 25 September 2015
Short description: | p2@SLC44A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC44A2_5end |
Coexpression cluster: | C3745_Alveolar_Renal_Placental_Amniotic_amniotic_choriocarcinoma_pancreatic |
Association with transcript: | 0bp_to_ENST00000380614_5end |
EntrezGene: | SLC44A2 |
HGNC: | 17292 |
UniProt: | E7ETY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.19e-16 | 253 |
endo-epithelial cell | 2.11e-10 | 42 |
extraembryonic cell | 8.28e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.30e-17 | 160 |
endoderm | 2.30e-17 | 160 |
presumptive endoderm | 2.30e-17 | 160 |
digestive system | 7.98e-12 | 145 |
digestive tract | 7.98e-12 | 145 |
primitive gut | 7.98e-12 | 145 |
epithelium | 4.01e-11 | 306 |
cell layer | 1.43e-10 | 309 |
trunk | 1.49e-10 | 199 |
embryo | 1.62e-10 | 592 |
respiratory system | 2.12e-10 | 74 |
developing anatomical structure | 9.35e-10 | 581 |
organ system subdivision | 2.02e-09 | 223 |
renal system | 2.95e-09 | 48 |
urinary system structure | 3.67e-09 | 47 |
extraembryonic membrane | 7.40e-09 | 14 |
membranous layer | 7.40e-09 | 14 |
anatomical conduit | 3.08e-08 | 240 |
subdivision of digestive tract | 9.51e-08 | 118 |
subdivision of trunk | 1.05e-07 | 112 |
thoracic segment of trunk | 1.18e-07 | 52 |
orifice | 1.27e-07 | 36 |
organ component layer | 1.66e-07 | 66 |
embryonic structure | 1.75e-07 | 564 |
surface structure | 2.72e-07 | 99 |
ectoderm-derived structure | 3.74e-07 | 171 |
ectoderm | 3.74e-07 | 171 |
presumptive ectoderm | 3.74e-07 | 171 |
reproductive structure | 5.54e-07 | 59 |
reproductive system | 5.54e-07 | 59 |
respiratory tract | 5.91e-07 | 54 |
epithelial fold | 5.92e-07 | 47 |