FFCP PHASE1:Hg19::chr12:83080253..83080309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=160335 | |EntrezGene=160335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25440 | |HGNC=25440 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N394 | |UniProt=Q8N394 | ||
|association_with_transcript=-349bp_to_ENST00000321196,ENST00000551915_5end | |association_with_transcript=-349bp_to_ENST00000321196,ENST00000551915_5end | ||
|cluster_id=chr12:83080253..83080309,+ | |||
|description=CAGE_peak_6_at_TMTC2_5end | |description=CAGE_peak_6_at_TMTC2_5end | ||
|id=chr12:83080253..83080309,+ | |id=chr12:83080253..83080309,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.12e-19!42;CL:0000860!2.13e-17!45;CL:0002194!3.16e-11!63;CL:0000576!3.16e-11!63;CL:0000040!3.16e-11!63;CL:0000559!3.16e-11!63;CL:0002009!3.64e-11!65;CL:0000557!1.50e-09!71;CL:0000839!3.07e-09!70;CL:0000766!1.57e-08!76 | |ontology_enrichment_celltype=CL:0002057!6.12e-19!42;CL:0000860!2.13e-17!45;CL:0002194!3.16e-11!63;CL:0000576!3.16e-11!63;CL:0000040!3.16e-11!63;CL:0000559!3.16e-11!63;CL:0002009!3.64e-11!65;CL:0000557!1.50e-09!71;CL:0000839!3.07e-09!70;CL:0000766!1.57e-08!76 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.56e-10;19!CL:0002577;6.12e-08;3!CL:0002541;5.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.77e-10,19;CL:0002577,8.42e-08,3;CL:0002541,8.50e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.47e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.60e-10;4!DOID:1612;2.60e-10;4!DOID:1749;8.33e-09;14!DOID:299;2.90e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.19e-10,4;DOID:1612,2.19e-10,4;DOID:1749,6.95e-09,14;DOID:305,1.71e-07,106;DOID:299,2.77e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.82e-15!115;UBERON:0000062!2.87e-13!511;UBERON:0000468!8.73e-09!659;UBERON:0005631!1.39e-08!14;UBERON:0000158!1.39e-08!14;UBERON:0000480!5.92e-08!626;UBERON:0000467!8.69e-08!625;UBERON:0001049!9.98e-08!57;UBERON:0005068!9.98e-08!57;UBERON:0006241!9.98e-08!57;UBERON:0007135!9.98e-08!57;UBERON:0000922!3.31e-07!612;UBERON:0002371!5.46e-07!80;UBERON:0003124!5.90e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.45e-11;24!UBERON:0005631;2.82e-10;10!UBERON:0000158;2.82e-10;10!UBERON:0001987;5.93e-10;4!UBERON:0006947;2.14e-08;3!UBERON:0004054;2.14e-08;3!UBERON:0000058;7.21e-08;10!UBERON:0003124;5.24e-07;3!UBERON:0000920;5.24e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.43e-18,14;UBERON:0000158,7.43e-18,14;UBERON:0003124,5.31e-15,7;UBERON:0000478,3.34e-11,24;UBERON:0004175,1.28e-10,25;UBERON:0001987,6.74e-10,4;UBERON:0004340,6.74e-10,4;UBERON:0006947,2.04e-08,3;UBERON:0004054,2.04e-08,3;UBERON:0004119,6.79e-07,160;UBERON:0000925,6.79e-07,160;UBERON:0006595,6.79e-07,160;UBERON:0000920,8.50e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,2.09340350391728,1.96597234917155,0.791300934685361,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0,0.786728553697808,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,1.10799081706375,1.60435557976113,0.868043482863407,0,0,0.257575567634187,0.436194716338694,0.755751887377619,0.970336244751265,0.697287110717054,0.411167888021826,0.309706370895104,1.7261543539329,2.30544635876191,1.89185783910868,0.344745680736619,0,1.35426486594342,1.31769637679823,0.818718450173537,0.449446968890169,1.53041946185451,0.641858054152187,0,0.989553900560148,0.199463657621632,2.13112375266347,0.290209238628584,1.13477044938228,0.622822248995575,1.7587406567972,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,0.949387162322653,0.211255286311942,0.212604299965044,0.419317291016752,0.673971786878971,0.750884464207532,0.16072558669708,1.71007646244749,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.458426764241994,0.364295288292542,0.741568885568859,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0,0,0,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0,3.1608175918371,6.86788929675898,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0.254094624222463,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,1.21251028578504,9.98612637062982,7.86214762657169,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,1.28913384510255,0,0,0,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0.509752546090077,0,0,0,0,0,0,0.325378394664303,1.44257416306811,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.893288987462089,1.0115778085555,0,0.94443704049192,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,1.7887322147588,0.43050537267123,0,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,1.96032172784825,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36277837387947,0,0,0,0.284136146806413,2.62618933211459,8.61197574414652,5.83605333988541,0,0.562677665642051,0,0.329607748453519,0,0.796991953004279,0,0.251932747854276,0.20453736500431,0,0,0.539210106883961,2.50629644545853,0,0.394573622547734,0,0,0,0.463840490809256,0,2.86470537193757,4.54791999980218,0.724999575434793,3.64139034513599,1.77977555204936,2.12748913591143,0,0,0.173624994933292,0,0.241192877250816,0,0.663475559587348,0,0,0,0.975966209950223,1.00035336054936,0.341826167541004,0.46112780877612,0.269272933229316,0.434589487688032,1.5950057986596,1.00757352742049,2.13213910407454,0,0,0,0,0,0,0,0,0,2.61172493054636,0.141353071433941,0,0,0.265372693510018,1.22206028986725,0,0,0,0.606610196826093,0,0.468528891450678,0,0.391329237864179,0,5.52418163989147,1.20990716048664,0.61214552326098,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0,0,0.569219092059585,0,1.73559738335131,0.0979923974143777,1.04471047896483,3.84398670132466,0,0,0.0730893170861856,0,2.32773639572207,0,1.12990370390266,0,0,0.189932387867636,0.195551382734803,0.240476460754601,2.56143593687223,0,0.72045208577053,0,0.343189995723929,0.14405479798815,0,0.235694034616795,0,0,0,0,1.80126086612937,0.684526894459965,0,0,0.262887354279314,0,0,0,0.599037001496973,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0.393709926058995,0,0,0.817220436669454,0,0,0,0.449947783103001,0,0.303747783290123,0.335434687599266,1.10327990218877,1.67854682031994,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.646414781807753,0.13223260174269,0,0.704815022316672,1.28144895081234,1.88645166119599,6.62782488555513,0.496166021811951,0.197611631897944,0,1.91502377331055,0,0.2506898940227,0,0,3.14108192500469,0,0.122026264901963,0.500763722825999,1.14681839138014,0.776503360757966,0.496771223531068,0,0,0.606596470166591,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107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| ||
|short_description=p6@TMTC2 | |short_description=p6@TMTC2 | ||
}} | }} |
Latest revision as of 02:41, 25 September 2015
Short description: | p6@TMTC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMTC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -349bp_to_ENST00000321196, ENST00000551915_5end |
EntrezGene: | TMTC2 |
HGNC: | 25440 |
UniProt: | Q8N394 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.77e-10 | 19 |
placental epithelial cell | 8.42e-08 | 3 |
chorionic membrane mesenchymal stem cell | 8.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.43e-18 | 14 |
membranous layer | 7.43e-18 | 14 |
chorion | 5.31e-15 | 7 |
extraembryonic structure | 3.34e-11 | 24 |
internal genitalia | 1.28e-10 | 25 |
placenta | 6.74e-10 | 4 |
allantois | 6.74e-10 | 4 |
male genital duct | 2.04e-08 | 3 |
internal male genitalia | 2.04e-08 | 3 |
endoderm-derived structure | 6.79e-07 | 160 |
endoderm | 6.79e-07 | 160 |
presumptive endoderm | 6.79e-07 | 160 |
egg chorion | 8.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.19e-10 | 4 |
breast cancer | 2.19e-10 | 4 |
squamous cell carcinoma | 6.95e-09 | 14 |
carcinoma | 1.71e-07 | 106 |
adenocarcinoma | 2.77e-07 | 25 |