FFCP PHASE1:Hg19::chr19:1082814..1082874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23526 | |EntrezGene=23526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17102 | |HGNC=17102 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010dsd.1_5end | |association_with_transcript=0bp_to_uc010dsd.1_5end | ||
|cluster_id=chr19:1082814..1082874,+ | |||
|description=CAGE_peak_6_at_HMHA1_5end | |description=CAGE_peak_6_at_HMHA1_5end | ||
|id=chr19:1082814..1082874,+ | |id=chr19:1082814..1082874,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.25e-15;7!CL:0000586;3.25e-15;7!CL:0002322;1.30e-14;5!CL:0002621;1.40e-08;3!CL:0002327;6.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.88e-15,7;CL:0000586,3.88e-15,7;CL:0002322,1.92e-14,5;CL:0000066,4.19e-09,253;CL:0002621,1.05e-08,3;CL:0002327,6.07e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.14e-07;10!UBERON:0005564;4.14e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.93e-13;4!DOID:1612;2.93e-13;4!DOID:299;1.94e-08;25!DOID:3095;1.86e-07;22!DOID:2994;1.86e-07;22!DOID:3493;9.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.81e-13,4;DOID:1612,2.81e-13,4;DOID:299,2.03e-08,25;DOID:305,3.01e-08,106;DOID:0050687,1.23e-07,143;DOID:3095,1.90e-07,22;DOID:2994,1.90e-07,22;DOID:3493,9.71e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.80e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.20e-12;8!UBERON:0003135;4.33e-12;11!UBERON:0001949;1.40e-08;3!UBERON:0004921;1.91e-07;33!UBERON:0001911;6.80e-07;4!UBERON:0001829;9.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.66e-12,8;UBERON:0003135,5.31e-12,11;UBERON:0001949,1.05e-08,3;UBERON:0001911,6.07e-07,4;UBERON:0005333,6.07e-07,4;UBERON:0008425,6.07e-07,4;UBERON:0005311,6.07e-07,4;UBERON:0001829,8.16e-07,2 | |||
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| 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| ||
|short_description=p6@HMHA1 | |short_description=p6@HMHA1 | ||
}} | }} |
Latest revision as of 02:55, 25 September 2015
Short description: | p6@HMHA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HMHA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010dsd.1_5end |
EntrezGene: | HMHA1 |
HGNC: | 17102 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.88e-15 | 7 |
germ cell | 3.88e-15 | 7 |
embryonic stem cell | 1.92e-14 | 5 |
epithelial cell | 4.19e-09 | 253 |
gingival epithelial cell | 1.05e-08 | 3 |
mammary gland epithelial cell | 6.07e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.66e-12 | 8 |
male reproductive organ | 5.31e-12 | 11 |
gingival epithelium | 1.05e-08 | 3 |
mammary gland | 6.07e-07 | 4 |
mammary bud | 6.07e-07 | 4 |
mammary ridge | 6.07e-07 | 4 |
mammary placode | 6.07e-07 | 4 |
major salivary gland | 8.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.81e-13 | 4 |
breast cancer | 2.81e-13 | 4 |
adenocarcinoma | 2.03e-08 | 25 |
carcinoma | 3.01e-08 | 106 |
cell type cancer | 1.23e-07 | 143 |
germ cell and embryonal cancer | 1.90e-07 | 22 |
germ cell cancer | 1.90e-07 | 22 |
signet ring cell adenocarcinoma | 9.71e-07 | 2 |