FFCP PHASE1:Hg19::chr1:100111421..100111448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54873 | |EntrezGene=54873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15846 | |HGNC=15846 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP74 | |UniProt=Q9NP74 | ||
|association_with_transcript=0bp_to_NM_017734,uc001dsf.2,uc001dsg.2_5end | |association_with_transcript=0bp_to_NM_017734,uc001dsf.2,uc001dsg.2_5end | ||
|cluster_id=chr1:100111421..100111448,+ | |||
|coexpression_cluster_id=C2508 | |||
|description=CAGE_peak_5_at_PALMD_5end | |description=CAGE_peak_5_at_PALMD_5end | ||
|id=chr1:100111421..100111448,+ | |id=chr1:100111421..100111448,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.42e-16!24;CL:0000071!2.28e-13!18;CL:0002546!2.28e-13!18;CL:0000115!2.81e-12!35;CL:0002078!5.41e-10!44;CL:1000413!5.02e-09!9 | |ontology_enrichment_celltype=CL:0002139!1.42e-16!24;CL:0000071!2.28e-13!18;CL:0002546!2.28e-13!18;CL:0000115!2.81e-12!35;CL:0002078!5.41e-10!44;CL:1000413!5.02e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.99e-28;24!CL:0000071;1.14e-20;18!CL:0000115;7.62e-19;36!CL:1000413;1.72e-16;9!CL:0002544;1.87e-11;6!CL:0002078;2.12e-11;45!CL:0002138;1.30e-08;6!CL:0000213;2.59e-08;58!CL:0000215;2.59e-08;58!CL:0000182;1.50e-07;12!CL:0002618;8.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.75e-28,24;CL:0000115,6.02e-23,36;CL:0000071,4.43e-21,18;CL:0002546,4.43e-21,18;CL:0002078,5.77e-17,45;CL:1000413,1.41e-16,9;CL:0000213,1.10e-11,58;CL:0000215,1.10e-11,58;CL:0002544,1.47e-11,6;CL:0005020,1.27e-08,6;CL:0002138,1.27e-08,6;CL:0005022,1.27e-08,6;CL:0000182,1.23e-07,12;CL:0002618,7.98e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.14e-20;18!UBERON:0003104;4.04e-09;31!CL:0005022;1.30e-08;6!UBERON:0008947;7.94e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!4.70e-32!286;UBERON:0007023!7.99e-31!115;UBERON:0004111!5.83e-29!241;UBERON:0000025!2.33e-26!194;UBERON:0000483!3.76e-19!309;UBERON:0000119!1.53e-18!312;UBERON:0000481!2.25e-17!347;UBERON:0000480!2.68e-16!626;UBERON:0000467!5.24e-16!625;UBERON:0000468!7.78e-14!659;UBERON:0001986!2.28e-13!18;UBERON:0004638!2.28e-13!18;UBERON:0004852!2.28e-13!18;UBERON:0003075!9.22e-13!86;UBERON:0007284!9.22e-13!86;UBERON:0001049!1.15e-12!57;UBERON:0005068!1.15e-12!57;UBERON:0006241!1.15e-12!57;UBERON:0007135!1.15e-12!57;UBERON:0003914!1.34e-12!118;UBERON:0000922!9.66e-12!612;UBERON:0002050!1.42e-11!605;UBERON:0005423!1.42e-11!605;UBERON:0002346!1.84e-11!90;UBERON:0000923!2.66e-11!604;UBERON:0005291!2.66e-11!604;UBERON:0006598!2.66e-11!604;UBERON:0002532!2.66e-11!604;UBERON:0000055!5.75e-11!69;UBERON:0000487!6.90e-11!22;UBERON:0004872!2.48e-10!84;UBERON:0000955!2.74e-10!69;UBERON:0006238!2.74e-10!69;UBERON:0002616!3.96e-10!59;UBERON:0003080!4.49e-10!42;UBERON:0001017!5.06e-10!82;UBERON:0000153!7.66e-10!129;UBERON:0007811!7.66e-10!129;UBERON:0000475!8.76e-10!365;UBERON:0006914!1.18e-09!25;UBERON:0002780!1.57e-09!41;UBERON:0001890!1.57e-09!41;UBERON:0006240!1.57e-09!41;UBERON:0005743!1.61e-09!86;UBERON:0002049!1.65e-09!79;UBERON:0007798!1.65e-09!79;UBERON:0000033!3.88e-09!123;UBERON:0001041!4.46e-09!98;UBERON:0003915!5.02e-09!9;UBERON:0004700!5.02e-09!9;UBERON:0001917!5.02e-09!9;UBERON:0004921!5.49e-09!129;UBERON:0004185!5.49e-09!129;UBERON:0001981!6.11e-09!60;UBERON:0007500!6.11e-09!60;UBERON:0004537!6.11e-09!60;UBERON:0006965!6.11e-09!60;UBERON:0000062!7.86e-09!511;UBERON:0001009!8.17e-09!113;UBERON:0000064!8.77e-09!219;UBERON:0002020!1.17e-08!34;UBERON:0003528!1.17e-08!34;UBERON:0003056!1.43e-08!61;UBERON:0001893!2.01e-08!34;UBERON:0003103!3.74e-08!69;UBERON:0002791!4.24e-08!33;UBERON:0000073!6.72e-08!94;UBERON:0001016!6.72e-08!94;UBERON:0001869!9.07e-08!32;UBERON:0001048!1.18e-07!168;UBERON:0003104!1.42e-07!238;UBERON:0009142!1.42e-07!238;UBERON:0004535!1.44e-07!110;UBERON:0000077!2.56e-07!130;UBERON:0001007!2.73e-07!155;UBERON:0001555!2.73e-07!155;UBERON:0007026!2.73e-07!155;UBERON:0002619!3.06e-07!22;UBERON:0007100!3.41e-07!27;UBERON:0004121!6.38e-07!169;UBERON:0001737!9.95e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.14e-20;18!UBERON:0001986;1.14e-20;18!UBERON:0004852;1.14e-20;18!UBERON:0003915;1.72e-16;9!UBERON:0004700;1.72e-16;9!UBERON:0001917;1.72e-16;9!UBERON:0000487;3.83e-16;22!UBERON:0006914;1.03e-13;25!UBERON:0007100;1.22e-08;25!UBERON:0000490;1.45e-08;33!UBERON:0002365;9.17e-08;31!UBERON:0002330;9.17e-08;31!UBERON:0000055;1.31e-07;65!UBERON:0004151;3.53e-07;3!UBERON:0003978;4.97e-07;3!UBERON:0000946;4.97e-07;3!UBERON:0002107;6.22e-07;19!UBERON:0006925;6.22e-07;19!UBERON:0001637;7.40e-07;42!UBERON:0003509;7.40e-07;42!UBERON:0004572;7.40e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.43e-21,18;UBERON:0001986,4.43e-21,18;UBERON:0004852,4.43e-21,18;UBERON:0004111,1.57e-18,240;UBERON:0003914,1.86e-18,117;UBERON:0000055,3.65e-17,68;UBERON:0003915,1.41e-16,9;UBERON:0004700,1.41e-16,9;UBERON:0001917,1.41e-16,9;UBERON:0000487,1.81e-16,22;UBERON:0000025,3.08e-16,192;UBERON:0001009,2.85e-14,112;UBERON:0006914,5.42e-14,25;UBERON:0002049,7.31e-14,78;UBERON:0007798,7.31e-14,78;UBERON:0004872,1.40e-13,83;UBERON:0007500,2.48e-13,59;UBERON:0001981,2.48e-13,59;UBERON:0004537,2.48e-13,59;UBERON:0006965,2.48e-13,59;UBERON:0004535,6.43e-12,109;UBERON:0001041,2.09e-10,87;UBERON:0007100,2.15e-09,27;UBERON:0004921,8.24e-09,118;UBERON:0000483,8.58e-09,306;UBERON:0007023,1.07e-08,114;UBERON:0000119,1.46e-08,309;UBERON:0002365,4.66e-08,31;UBERON:0002330,4.66e-08,31;UBERON:0009569,6.80e-08,112;UBERON:0003103,9.11e-08,68;UBERON:0001637,1.72e-07,42;UBERON:0003509,1.72e-07,42;UBERON:0004572,1.72e-07,42;UBERON:0004151,3.07e-07,3;UBERON:0002107,5.28e-07,19;UBERON:0006925,5.28e-07,19;UBERON:0008836,5.28e-07,19;UBERON:0003978,5.49e-07,3;UBERON:0009751,5.49e-07,3;UBERON:0000946,5.49e-07,3;UBERON:0002523,5.49e-07,3;UBERON:0005983,5.49e-07,3;UBERON:0002165,5.49e-07,3;UBERON:0002062,5.49e-07,3;UBERON:0007280,5.49e-07,3;UBERON:0001048,6.51e-07,160;UBERON:0000490,8.04e-07,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0,0,0.795285947051099,0,0.189069634328136,0,0.527008714158756,0.458426764241994,0,0.741568885568859,0,0,0,0,0,0,2.38514888840046,1.72046919021225,3.81854551768354,1.13061588384802,4.19499436209906,3.30141650328081,1.46296476575767,3.87625138753993,5.33649394030065,11.7152214467635,0.402829317109147,1.52054421143703,1.95249646038536,2.94130464276695,6.48113558305408,6.6081798930219,1.57170560838319,3.0405099730497,0,0.949265659568129,1.64881569537367,0,0,0,0,0.633152558322899,0.264818361626438,0,0,0.560677600142307,0,0.49333509683432,0.311211035399766,1.88594940897563,1.47115712802113,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,1.70148274740032,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18306800039844,0.674338760312407,2.89213235860178,1.21323370005633,1.08939722046203,0.474541238222193,0.808987848960987,0.588664395376038,1.53898862778556,0,0,0,0,8.87285243752816,1.96565443335525,2.95394953340702,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0.469634776943287,2.16549671641611,0,1.52203321787679,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.680374821106063,1.72732732881711,3.08454505380579,0,0,0,0,0,0,0,0,0,0,4.6368455241475,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.178064071293475,0.661139661443912,0,0.127612712494584,0.10115778085555,0,0,0,0,1.06461206063404,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0.808729926293264,1.58510321173008,0,0,0,0,0,0,0,0,2.65375590096488,2.19225442626881,0,0,1.62328301570163,0,0.281695602532241,0,0,1.07001315444375,0,0.211107635297664,0,0,0,0.384888450902048,0,0,5.27205284349963,0,0,0,0,0,0,0,0,0,0,0,0,2.24330549367694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.17890078432281,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.463840490809256,0,0,1.74919999992391,1.44999915086959,0.682760689712998,0.508507300585533,0,0,0,0,0,0.60298219312704,0,0.110579259931225,0.295547618953547,0,0.32681539055697,0.139423744278603,1.07730361905316,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0.948768663620925,0.158936578980379,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0.269604531922708,1.60515529459758,0.702793337176017,0,0.586993856796269,0,0,0,0.30607276163049,0.821425535170343,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,1.39781334593624,0,0.387025325156341,0.219267951258557,0.0821154570532092,1.16386819786103,0,1.35588444468319,0,0,0.253243183823515,0,0.240476460754601,0.213452994739353,4.99524023955326,0,0.114536596165916,0,0,0,0.707082103850386,0.135904206073614,0,0,0,0.600420288709789,0.821432273351958,0,0.429765441419957,0,2.51354161145029,3.20824593616357,4.30723814746088,1.59743200399193,2.57535628881943,4.24025769139558,3.56072404179649,0,1.16495949527454,5.59360594381288,5.60427836991932,6.13372249073083,0.0984274815147488,0,0.795229689809303,1.49823746722733,0,0,0,0,0,0.303747783290123,0,0.788057072991982,0.157363764404994,0,0.35857467866569,0,2.85878130549347,5.95882773328889,0,0,0,0,0,0,0,0,2.93104467356165,1.32506888912221,0.775697738169303,0.52893040697076,0.342173675768659,2.11444506695002,1.60181118851542,3.93010762749165,1.24271716604159,0.496166021811951,0.197611631897944,0,0,3.80812462358632,3.0082787282724,2.14441903734423,2.95085367638824,0,0,0.488105059607853,0.250381861413,1.72022758707021,1.22021956690538,0.620964029413834,3.87376177821446,4.49929468663584,0,0,0,0,0,0,0,0,0,0.251567901752575,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.363697318405119,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.862598491173454,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.578063025868136,1.41696576325585,0.478901577171454,0.41023272848151,1.00828678488687,0.0691572524642179,0.645902582527404,0,0.294443155503077,0.11796972334774,0,0,0,0.690359926060101,0,1.20336525358812,0,0,0,0,0,0.405225507710368,0.781078098613847,0.206686796501184,0.317079050969534,1.64092442705466,4.38606213485746,0.496211178389294,0,1.02209942111676,0,1.00885116665647,1.21393120847326,0.455324382702595,3.72549954683083,0,0.5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| ||
|short_description=p5@PALMD | |short_description=p5@PALMD | ||
}} | }} |
Latest revision as of 03:06, 25 September 2015
Short description: | p5@PALMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PALMD_5end |
Coexpression cluster: | C2508_mature_skeletal_left_Endothelial_adipose_heart_gastric |
Association with transcript: | 0bp_to_NM_017734, uc001dsf.2, uc001dsg.2_5end |
EntrezGene: | PALMD |
HGNC: | 15846 |
UniProt: | Q9NP74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.75e-28 | 24 |
endothelial cell | 6.02e-23 | 36 |
blood vessel endothelial cell | 4.43e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.43e-21 | 18 |
meso-epithelial cell | 5.77e-17 | 45 |
endothelial cell of artery | 1.41e-16 | 9 |
lining cell | 1.10e-11 | 58 |
barrier cell | 1.10e-11 | 58 |
aortic endothelial cell | 1.47e-11 | 6 |
lymphangioblast | 1.27e-08 | 6 |
endothelial cell of lymphatic vessel | 1.27e-08 | 6 |
vascular lymphangioblast | 1.27e-08 | 6 |
hepatocyte | 1.23e-07 | 12 |
endothelial cell of umbilical vein | 7.98e-07 | 3 |