FFCP PHASE1:Hg19::chr2:228029355..228029366,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:228029355..228029366,+ to FFCP PHASE1:Hg19::chr2:228029355..228029366,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1285 | |EntrezGene=1285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2204 | |HGNC=2204 | ||
|TSSclassifier=strong | |||
|UniProt=F8W841,E7ENN2,F8W849,F8W8L3,Q01955 | |UniProt=F8W841,E7ENN2,F8W849,F8W8L3,Q01955 | ||
|association_with_transcript=74bp_to_ENST00000315699,ENST00000328380,ENST00000335583,ENST00000396574,ENST00000396578,NM_000091,uc002vom.1,uc002von.1,uc002voo.1,uc002vop.1_5end | |||
|cluster_id=chr2:228029355..228029366,+ | |||
|description=CAGE_peak_3_at_COL4A3_5end | |||
|id=chr2:228029355..228029366,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.49e-12;3!UBERON:0010226;2.88e-09;1!UBERON:0010115;2.88e-09;1!UBERON:0005425;2.88e-09;1!UBERON:0004874;2.88e-09;1!UBERON:0007123;2.11e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.93e-48!115;UBERON:0001049!2.81e-15!57;UBERON:0005068!2.81e-15!57;UBERON:0006241!2.81e-15!57;UBERON:0007135!2.81e-15!57;UBERON:0003075!2.87e-15!86;UBERON:0007284!2.87e-15!86;UBERON:0002346!4.61e-14!90;UBERON:0002616!2.43e-13!59;UBERON:0000955!9.21e-12!69;UBERON:0006238!9.21e-12!69;UBERON:0005743!9.30e-12!86;UBERON:0002780!2.21e-11!41;UBERON:0001890!2.21e-11!41;UBERON:0006240!2.21e-11!41;UBERON:0003080!5.82e-11!42;UBERON:0001017!6.23e-11!82;UBERON:0000073!1.39e-10!94;UBERON:0001016!1.39e-10!94;UBERON:0000477!6.07e-10!286;UBERON:0003056!6.57e-09!61;UBERON:0000025!1.32e-08!194;UBERON:0000481!2.96e-08!347;UBERON:0000062!4.12e-08!511;UBERON:0001894!4.41e-08!7;UBERON:0006222!4.41e-08!7;UBERON:0002298!8.40e-08!8;UBERON:0004111!1.27e-07!241;UBERON:0003296!1.33e-07!4;UBERON:0010133!1.33e-07!4;UBERON:0000033!6.44e-07!123;UBERON:0000153!9.47e-07!129;UBERON:0007811!9.47e-07!129;UBERON:0002020!9.61e-07!34;UBERON:0003528!9.61e-07!34;UBERON:0001893!9.85e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.15e-32;4!UBERON:0010133;1.15e-32;4!UBERON:0001894;8.52e-19;7!UBERON:0001905;2.64e-17;2!UBERON:0002757;2.64e-17;2!UBERON:0010134;2.64e-17;2!UBERON:0005408;2.64e-17;2!UBERON:0001899;2.64e-17;2!UBERON:0000007;3.51e-17;2!UBERON:0001896;1.59e-11;3!UBERON:0006947;1.59e-11;3!UBERON:0005290;1.59e-11;3!UBERON:0004054;1.59e-11;3!UBERON:0002135;9.03e-10;1!UBERON:0002363;2.88e-09;1!UBERON:0002084;2.88e-09;1!UBERON:0001000;2.88e-09;1!UBERON:0000989;2.88e-09;1!UBERON:0000941;2.88e-09;1!UBERON:0001301;2.88e-09;1!UBERON:0002171;2.88e-09;1!UBERON:0001785;2.88e-09;1!UBERON:0002464;2.88e-09;1!UBERON:0004904;2.88e-09;1!UBERON:0008811;2.88e-09;1!UBERON:0001021;2.88e-09;1!UBERON:0002082;2.88e-09;1!UBERON:0006518;2.88e-09;1!UBERON:0008949;2.88e-09;1!UBERON:0000101;2.88e-09;1!UBERON:0005352;2.88e-09;1!UBERON:0002167;2.88e-09;1!UBERON:0002784;4.15e-09;4!UBERON:0005904;7.28e-09;4!UBERON:0002046;2.11e-07;5!UBERON:0002368;2.99e-07;33!UBERON:0003135;5.06e-07;11!UBERON:0007023;6.54e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.54e-33,4;UBERON:0010133,3.54e-33,4;UBERON:0007023,4.25e-22,114;UBERON:0001894,4.39e-19,7;UBERON:0006222,4.39e-19,7;UBERON:0000007,1.62e-17,2;UBERON:0001905,1.76e-17,2;UBERON:0002757,1.76e-17,2;UBERON:0010134,1.76e-17,2;UBERON:0005408,1.76e-17,2;UBERON:0001899,1.76e-17,2;UBERON:0001896,1.97e-11,3;UBERON:0005290,1.97e-11,3;UBERON:0010096,1.97e-11,3;UBERON:0006947,2.31e-11,3;UBERON:0004054,2.31e-11,3;UBERON:0002135,8.68e-10,1;UBERON:0000989,1.69e-09,1;UBERON:0008811,1.69e-09,1;UBERON:0006258,1.69e-09,1;UBERON:0005876,1.69e-09,1;UBERON:0004874,1.69e-09,1;UBERON:0000941,1.99e-09,1;UBERON:0001785,1.99e-09,1;UBERON:0002464,1.99e-09,1;UBERON:0004904,1.99e-09,1;UBERON:0001021,1.99e-09,1;UBERON:0003902,1.99e-09,1;UBERON:0005425,1.99e-09,1;UBERON:0002084,2.35e-09,1;UBERON:0002082,2.35e-09,1;UBERON:0010226,2.35e-09,1;UBERON:0002171,2.55e-09,1;UBERON:0006518,2.55e-09,1;UBERON:0008949,2.55e-09,1;UBERON:0000101,2.55e-09,1;UBERON:0002167,2.55e-09,1;UBERON:0001000,2.77e-09,1;UBERON:0005352,2.77e-09,1;UBERON:0002784,3.40e-09,4;UBERON:0001301,5.28e-09,1;UBERON:0002363,5.72e-09,1;UBERON:0007645,5.72e-09,1;UBERON:0007647,5.72e-09,1;UBERON:0010115,5.72e-09,1;UBERON:0005904,9.62e-09,4;UBERON:0000949,3.74e-08,45;UBERON:0002368,5.64e-08,35;UBERON:0010314,5.72e-08,132;UBERON:0002046,1.83e-07,5;UBERON:0004117,1.83e-07,5;UBERON:0007689,1.83e-07,5;UBERON:0007123,1.83e-07,5;UBERON:0003091,1.83e-07,5;UBERON:0003135,5.12e-07,11 | |||
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|short_description=p3@COL4A3 | |||
}} | }} |
Latest revision as of 03:42, 25 September 2015
Short description: | p3@COL4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL4A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 74bp_to_ENST00000315699, ENST00000328380, ENST00000335583, ENST00000396574, ENST00000396578, NM_000091, uc002vom.1, uc002von.1, uc002voo.1, uc002vop.1_5end |
EntrezGene: | COL4A3 |
HGNC: | 2204 |
UniProt: | F8W841E7ENN2F8W849F8W8L3Q01955 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data