FFCP PHASE1:Hg19::chr12:8975101..8975108,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:8975101..8975108,+
|short_description=p4@A2ML1
|description=CAGE_peak_4_at_A2ML1_5end
|association_with_transcript=33bp_to_ENST00000299698_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144568 | |EntrezGene=144568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23336 | |HGNC=23336 | ||
|TSSclassifier=strong | |||
|UniProt=A8K2U0 | |UniProt=A8K2U0 | ||
|association_with_transcript=33bp_to_ENST00000299698_5end | |||
|cluster_id=chr12:8975101..8975108,+ | |||
|coexpression_cluster_id=C1369 | |||
|description=CAGE_peak_4_at_A2ML1_5end | |||
|id=chr12:8975101..8975108,+ | |||
|ontology_enrichment_celltype=CL:0002623!3.67e-14!3;CL:0002536!2.21e-10!2;CL:0000039!2.33e-10!7;CL:0000586!2.33e-10!7;CL:0002537!1.19e-09!5;CL:0000622!1.09e-08!5;CL:0000154!2.59e-07!6;CL:0000349!3.66e-07!3;CL:0002577!3.66e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;9.07e-27;5!CL:0000349;1.99e-12;19!CL:0001014;2.07e-08;2!CL:0001016;2.07e-08;2!CL:0002536;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,9.07e-27,5;CL:0000349,1.94e-12,19;CL:0001014,2.00e-08,2;CL:0001016,2.00e-08,2;CL:0002536,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.07e-15;1!UBERON:0004874;2.75e-15;1!UBERON:0008814;2.67e-08;2!UBERON:0010056;2.67e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;2.67e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.90e-21!14;UBERON:0000158!9.90e-21!14;UBERON:0000305!2.29e-17!7;UBERON:0004871!3.69e-15!8;UBERON:0001042!1.11e-11!10;UBERON:0009145!1.11e-11!10;UBERON:0000478!1.53e-11!24;UBERON:0003408!4.29e-11!10;UBERON:0006562!1.36e-10!11;UBERON:0000341!1.59e-10!2;UBERON:0000166!4.95e-10!21;UBERON:0000078!7.50e-09!18;UBERON:0000974!1.45e-07!10;UBERON:0001723!1.78e-07!3;UBERON:0001033!1.78e-07!3;UBERON:0010056!1.78e-07!3;UBERON:0001044!2.59e-07!6;UBERON:0003293!2.59e-07!6;UBERON:0003294!2.59e-07!6;UBERON:0010047!2.59e-07!6;UBERON:0000167!2.59e-07!6;UBERON:0000165!2.76e-07!28;UBERON:0000930!2.76e-07!28;UBERON:0000161!3.19e-07!35;UBERON:0003135!9.32e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;4.26e-33;7!UBERON:0005631;2.66e-23;10!UBERON:0000158;2.66e-23;10!UBERON:0001723;8.26e-20;3!UBERON:0001033;8.26e-20;3!UBERON:0002372;1.07e-15;1!UBERON:0007029;1.07e-15;1!UBERON:0001961;1.07e-15;1!UBERON:0001744;1.07e-15;1!UBERON:0001042;1.07e-15;1!UBERON:0001735;1.07e-15;1!UBERON:0000989;2.75e-15;1!UBERON:0008811;2.75e-15;1!UBERON:0000478;6.82e-10;24!UBERON:0006562;1.67e-08;2!UBERON:0000341;2.67e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,3.93e-33,7;UBERON:0004871,4.75e-29,8;UBERON:0001723,8.67e-20,3;UBERON:0001033,8.67e-20,3;UBERON:0010056,8.67e-20,3;UBERON:0005631,9.05e-17,14;UBERON:0000158,9.05e-17,14;UBERON:0007029,1.16e-15,1;UBERON:0002372,1.34e-15,1;UBERON:0001961,1.34e-15,1;UBERON:0001744,1.34e-15,1;UBERON:0001735,1.34e-15,1;UBERON:0000989,2.06e-15,1;UBERON:0008811,2.06e-15,1;UBERON:0006258,2.06e-15,1;UBERON:0005876,2.06e-15,1;UBERON:0004874,2.06e-15,1;UBERON:0001042,2.25e-13,10;UBERON:0009145,2.25e-13,10;UBERON:0006562,3.26e-12,11;UBERON:0000478,6.66e-10,24;UBERON:0000341,2.67e-08,2;UBERON:0001557,2.65e-07,19 | |||
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|short_description=p4@A2ML1 | |||
}} | }} |
Latest revision as of 07:11, 25 September 2015
Short description: | p4@A2ML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_A2ML1_5end |
Coexpression cluster: | C1369_amniotic_immature_skin_salivary_chorionic_tongue_esophagus |
Association with transcript: | 33bp_to_ENST00000299698_5end |
EntrezGene: | A2ML1 |
HGNC: | 23336 |
UniProt: | A8K2U0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 9.07e-27 | 5 |
extraembryonic cell | 1.94e-12 | 19 |
CD1a-positive Langerhans cell | 2.00e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.00e-08 | 2 |
amniotic epithelial cell | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 3.93e-33 | 7 |
somatic layer of lateral plate mesoderm | 4.75e-29 | 8 |
tongue | 8.67e-20 | 3 |
gustatory system | 8.67e-20 | 3 |
future tongue | 8.67e-20 | 3 |
extraembryonic membrane | 9.05e-17 | 14 |
membranous layer | 9.05e-17 | 14 |
surface | 1.16e-15 | 1 |
tonsil | 1.34e-15 | 1 |
mucosa-associated lymphoid tissue | 1.34e-15 | 1 |
lymphoid tissue | 1.34e-15 | 1 |
tonsillar ring | 1.34e-15 | 1 |
penis | 2.06e-15 | 1 |
intromittent organ | 2.06e-15 | 1 |
lateral plate mesenchyme | 2.06e-15 | 1 |
undifferentiated genital tubercle | 2.06e-15 | 1 |
somatopleure | 2.06e-15 | 1 |
chordate pharynx | 2.25e-13 | 10 |
pharyngeal region of foregut | 2.25e-13 | 10 |
pharynx | 3.26e-12 | 11 |
extraembryonic structure | 6.66e-10 | 24 |
throat | 2.67e-08 | 2 |
upper respiratory tract | 2.65e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.87e-08 | 2 |