Personal tools

FFCP PHASE1:Mm9::chr7:104991415..104991422,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18479
|EntrezGene=18479
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G5E884
|UniProt=G5E884
|association_with_transcript=-22bp_to_ENSMUST00000033040,ENSMUST00000156637_5end
|association_with_transcript=-22bp_to_ENSMUST00000033040,ENSMUST00000156637_5end
|cluster_id=chr7:104991415..104991422,+
|description=CAGE_peak_8_at_Pak1_5end
|description=CAGE_peak_8_at_Pak1_5end
|id=chr7:104991415..104991422,+
|id=chr7:104991415..104991422,+
|ontology_enrichment_celltype=CL:0000117!4.45e-15!23;CL:0000337!4.45e-15!23;CL:0000540!4.19e-10!33;CL:0000047!4.19e-10!33;CL:0000031!4.19e-10!33;CL:0000404!4.19e-10!33;CL:0000221!5.33e-09!44;CL:0000133!5.33e-09!44;CL:0002319!9.56e-09!43;CL:0000393!3.96e-08!39;CL:0000211!3.96e-08!39;CL:0000055!6.08e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.83e-28,23;CL:0000337,6.83e-28,23;CL:0000540,7.08e-18,33;CL:0000047,7.08e-18,33;CL:0000031,7.08e-18,33;CL:0000404,7.08e-18,33;CL:0000393,2.38e-14,39;CL:0000211,2.38e-14,39;CL:0002319,5.45e-14,43;CL:0000221,1.49e-13,44;CL:0000133,1.49e-13,44;CL:0002610,1.45e-07,3;CL:0002613,4.92e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.82e-26!52;UBERON:0005068!1.82e-26!52;UBERON:0006241!1.82e-26!52;UBERON:0007135!1.82e-26!52;UBERON:0000955!2.61e-25!50;UBERON:0006238!2.61e-25!50;UBERON:0002616!1.60e-24!49;UBERON:0000033!2.42e-24!63;UBERON:0001017!6.64e-24!73;UBERON:0005743!6.64e-24!73;UBERON:0000073!2.68e-23!75;UBERON:0001016!2.68e-23!75;UBERON:0002020!4.28e-22!34;UBERON:0002346!6.50e-22!71;UBERON:0003075!6.50e-22!71;UBERON:0007284!6.50e-22!71;UBERON:0002791!2.89e-18!29;UBERON:0003528!2.89e-18!29;UBERON:0001893!2.89e-18!29;UBERON:0003056!3.42e-18!49;UBERON:0003080!4.08e-18!40;UBERON:0004121!7.58e-18!102;UBERON:0000924!7.58e-18!102;UBERON:0006601!7.58e-18!102;UBERON:0002780!2.81e-17!39;UBERON:0001890!2.81e-17!39;UBERON:0006240!2.81e-17!39;UBERON:0007811!7.10e-15!86;UBERON:0000153!3.71e-14!94;UBERON:0000956!1.53e-12!21;UBERON:0001869!1.53e-12!21;UBERON:0000203!1.53e-12!21;UBERON:0002619!2.20e-10!17;UBERON:0003076!5.26e-09!12;UBERON:0003057!5.26e-09!12;UBERON:0002021!4.61e-08!10;UBERON:0000411!4.61e-08!10;UBERON:0001950!4.61e-08!10;UBERON:0002420!5.38e-07!8;UBERON:0007245!5.38e-07!8;UBERON:0010009!5.38e-07!8;UBERON:0010011!5.38e-07!8;UBERON:0000454!5.38e-07!8;UBERON:0000025!5.46e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.42e-51,54;UBERON:0001049,2.42e-46,52;UBERON:0005068,2.42e-46,52;UBERON:0006241,2.42e-46,52;UBERON:0007135,2.42e-46,52;UBERON:0001017,6.29e-44,73;UBERON:0001016,1.69e-42,75;UBERON:0002020,3.39e-42,34;UBERON:0000955,7.68e-38,47;UBERON:0006238,7.68e-38,47;UBERON:0002616,3.76e-36,46;UBERON:0002346,6.03e-36,64;UBERON:0003075,6.03e-36,64;UBERON:0007284,6.03e-36,64;UBERON:0003528,2.83e-33,29;UBERON:0002791,2.83e-33,29;UBERON:0001893,2.83e-33,29;UBERON:0004121,1.68e-31,95;UBERON:0000924,1.68e-31,95;UBERON:0006601,1.68e-31,95;UBERON:0010371,2.17e-30,73;UBERON:0003080,3.70e-29,40;UBERON:0002780,2.36e-27,39;UBERON:0001890,2.36e-27,39;UBERON:0006240,2.36e-27,39;UBERON:0003056,1.66e-22,49;UBERON:0000956,2.58e-22,21;UBERON:0001869,2.58e-22,21;UBERON:0000203,2.58e-22,21;UBERON:0010314,3.15e-22,92;UBERON:0002619,9.55e-19,17;UBERON:0003076,1.43e-17,12;UBERON:0003057,1.43e-17,12;UBERON:0000025,2.76e-17,114;UBERON:0002021,3.67e-17,10;UBERON:0000411,3.67e-17,10;UBERON:0001950,3.67e-17,10;UBERON:0004111,1.52e-15,122;UBERON:0002420,6.15e-12,8;UBERON:0007245,6.15e-12,8;UBERON:0010009,6.15e-12,8;UBERON:0010011,6.15e-12,8;UBERON:0000454,6.15e-12,8;UBERON:0002240,2.33e-11,6;UBERON:0005174,2.33e-11,6;UBERON:0001137,2.33e-11,6;UBERON:0011216,3.77e-11,194;UBERON:0000369,3.27e-10,5;UBERON:0002435,3.27e-10,5;UBERON:0000204,3.27e-10,5;UBERON:0010082,3.27e-10,5;UBERON:0001948,5.08e-10,5;UBERON:0002315,5.08e-10,5;UBERON:0000483,3.71e-08,174;UBERON:0000119,5.82e-08,176;UBERON:0004733,6.65e-08,6;UBERON:0004732,6.65e-08,6;UBERON:0002028,6.65e-08,6;UBERON:0007277,6.65e-08,6;UBERON:0004684,1.45e-07,3;UBERON:0002275,1.45e-07,3
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.971020706062307,0.251793635951155,0.101376931219515,0,1.56478268869608,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,0,0.677689064138264,0,0,0,0,0,0,1.76272340924412,2.16009501330705,0.210324961351382,1.99955689082663,3.3130281142742,3.30725157880376,2.01275489138296,0.919218786610021,3.30347642998166,6.2566795661742,4.45458946443106,3.29715719325485,3.38504281328916,2.6045668527838,4.4669279840221,0.56276261003168,2.13917546887534,2.94628585473668,2.56269025438385,2.23679334990361,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,4.19413790333504,2.74500361691176,1.88481528169297,3.82413504423008,3.83573185995496,1.87009240103604,1.29793010454206,0.305518091550949,0,0,0.210441855886474,0,0,0.360124259610698,0.30140963567143,0.136072998302656,0.512454881139399,0.281105173679186,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.9551876352064,0,0,0.426576501070468,0.232236671860439,0,0.605050573870028,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0.50925170356284,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.21101179975584,3.6335622843583,0,0,0,0,0,0,0.222798674082394,0,0,0,0.790575555893047,2.57057053137446,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.822745103010605,0,0,0.21183207086382,0,0,0,0,0,0,0,1.66882771809459,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0.506868376472335,0.117357238645754,0,0.209718688851422,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,1.38097570952153,2.86447756719698,2.23409137046794,2.05524755931193,1.5107877947794,2.02506750069542,1.80128481289688,4.07828168085784,3.10656187051092,0.415149390336707,0,1.19513524027894,0,0.628839487883947,0.183843508450014,0,0.824140228955577,0,0.252697211763798,0,0.565879024158229,0.37456602987953,0.512201219238954,0.402048282689293,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,0.294397840268795,1.02860775715625,0.354951612318675,0.715308569841963,0.436039249896986,0.470546902076653,0.761531471025089,0.182927972872773,0.263069711437843,0.814824683075171,0,0.355905054372522,0.788035859004508,0,0.154936841185966,0.771626443924566,0.749431733813838,0,0.429742108096597,0.191288332068843,0,0.463735671240843
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.971020706062307,0.251793635951155,0.101376931219515,0,1.56478268869608,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,0,0.677689064138264,0,0,0,0,0,0,1.76272340924412,2.16009501330705,0.210324961351382,1.99955689082663,3.3130281142742,3.30725157880376,2.01275489138296,0.919218786610021,3.30347642998166,6.2566795661742,4.45458946443106,3.29715719325485,3.38504281328916,2.6045668527838,4.4669279840221,0.56276261003168,2.13917546887534,2.94628585473668,2.56269025438385,2.23679334990361,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,4.19413790333504,2.74500361691176,1.88481528169297,3.82413504423008,3.83573185995496,1.87009240103604,1.29793010454206,0.305518091550949,0,0,0.210441855886474,0,0,0.360124259610698,0.30140963567143,0.136072998302656,0.512454881139399,0.281105173679186,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.9551876352064,0,0,0.426576501070468,0.232236671860439,0,0.605050573870028,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0.50925170356284,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.21101179975584,3.6335622843583,0,0,0,0,0,0,0.222798674082394,0,0,0,0.790575555893047,2.57057053137446,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.822745103010605,0,0,0.21183207086382,0,0,0,0,0,0,0,1.66882771809459,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0.506868376472335,0.117357238645754,0,0.209718688851422,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,1.38097570952153,2.86447756719698,2.23409137046794,2.05524755931193,1.5107877947794,2.02506750069542,1.80128481289688,4.07828168085784,3.10656187051092,0.415149390336707,0,1.19513524027894,0,0.628839487883947,0.183843508450014,0,0.824140228955577,0,0.252697211763798,0,0.565879024158229,0.37456602987953,0.512201219238954,0.402048282689293,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,0.294397840268795,1.02860775715625,0.354951612318675,0.715308569841963,0.436039249896986,0.470546902076653,0.761531471025089,0.182927972872773,0.263069711437843,0.814824683075171,0,0.355905054372522,0.788035859004508,0,0.154936841185966,0.771626443924566,0.749431733813838,0,0.429742108096597,0.191288332068843,0,0.463735671240843
|short_description=p8@Pak1
|short_description=p8@Pak1
}}
}}

Latest revision as of 13:46, 25 September 2015

Short description:p8@Pak1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Pak1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -22bp_to_ENSMUST00000033040, ENSMUST00000156637_5end
EntrezGene:Pak1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Pak1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.42e-5154
neural tube2.42e-4652
neural rod2.42e-4652
future spinal cord2.42e-4652
neural keel2.42e-4652
central nervous system6.29e-4473
nervous system1.69e-4275
gray matter3.39e-4234
brain7.68e-3847
future brain7.68e-3847
regional part of brain3.76e-3646
neurectoderm6.03e-3664
neural plate6.03e-3664
presumptive neural plate6.03e-3664
brain grey matter2.83e-3329
regional part of telencephalon2.83e-3329
telencephalon2.83e-3329
ectoderm-derived structure1.68e-3195
ectoderm1.68e-3195
presumptive ectoderm1.68e-3195
ecto-epithelium2.17e-3073
anterior neural tube3.70e-2940
regional part of forebrain2.36e-2739
forebrain2.36e-2739
future forebrain2.36e-2739
pre-chordal neural plate1.66e-2249
cerebral cortex2.58e-2221
cerebral hemisphere2.58e-2221
pallium2.58e-2221
structure with developmental contribution from neural crest3.15e-2292
regional part of cerebral cortex9.55e-1917
posterior neural tube1.43e-1712
chordal neural plate1.43e-1712
tube2.76e-17114
occipital lobe3.67e-1710
visual cortex3.67e-1710
neocortex3.67e-1710
anatomical conduit1.52e-15122
basal ganglion6.15e-128
nuclear complex of neuraxis6.15e-128
aggregate regional part of brain6.15e-128
collection of basal ganglia6.15e-128
cerebral subcortex6.15e-128
spinal cord2.33e-116
dorsal region element2.33e-116
dorsum2.33e-116
organ system subdivision3.77e-11194
corpus striatum3.27e-105
striatum3.27e-105
ventral part of telencephalon3.27e-105
future corpus striatum3.27e-105
regional part of spinal cord5.08e-105
gray matter of spinal cord5.08e-105
epithelium3.71e-08174
cell layer5.82e-08176
segmental subdivision of hindbrain6.65e-086
segmental subdivision of nervous system6.65e-086
hindbrain6.65e-086
presumptive hindbrain6.65e-086
raphe nuclei1.45e-073
reticular formation1.45e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:104991415..104991422,%2B&oldid=4194427"