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FFCP PHASE1:Mm9::chr10:120748090..120748107,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:120748090..120748107,-
|DHSsupport=NA
|short_description=p3@Tbc1d30
|DPIdataset=NA
|description=CAGE_peak_3_at_Tbc1d30_5end
|association_with_transcript=137bp_to_ENSMUST00000064107,NM_029057,uc007hfm.2_5end
|EntrezGene=74694
|EntrezGene=74694
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q69ZT9
|UniProt=Q69ZT9
|association_with_transcript=137bp_to_ENSMUST00000064107,NM_029057,uc007hfm.2_5end
|cluster_id=chr10:120748090..120748107,-
|description=CAGE_peak_3_at_Tbc1d30_5end
|id=chr10:120748090..120748107,-
|ontology_enrichment_celltype=CL:0000117!7.47e-15!23;CL:0000337!7.47e-15!23;CL:0000540!3.37e-10!33;CL:0000047!3.37e-10!33;CL:0000031!3.37e-10!33;CL:0000404!3.37e-10!33;CL:0002319!7.06e-07!43;CL:0000221!8.46e-07!44;CL:0000133!8.46e-07!44;CL:0000393!9.46e-07!39;CL:0000211!9.46e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.67e-27,23;CL:0000337,5.67e-27,23;CL:0000540,1.32e-16,33;CL:0000047,1.32e-16,33;CL:0000031,1.32e-16,33;CL:0000404,1.32e-16,33;CL:0000393,5.47e-13,39;CL:0000211,5.47e-13,39;CL:0002319,3.70e-11,43;CL:0000221,9.35e-11,44;CL:0000133,9.35e-11,44;CL:0002609,4.13e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.22e-22!52;UBERON:0005068!1.22e-22!52;UBERON:0006241!1.22e-22!52;UBERON:0007135!1.22e-22!52;UBERON:0000033!1.42e-21!63;UBERON:0001017!4.93e-21!73;UBERON:0005743!4.93e-21!73;UBERON:0000073!5.67e-21!75;UBERON:0001016!5.67e-21!75;UBERON:0000955!8.86e-21!50;UBERON:0006238!8.86e-21!50;UBERON:0002346!3.55e-20!71;UBERON:0003075!3.55e-20!71;UBERON:0007284!3.55e-20!71;UBERON:0002616!3.69e-20!49;UBERON:0003056!1.34e-19!49;UBERON:0002020!1.70e-18!34;UBERON:0004121!3.28e-17!102;UBERON:0000924!3.28e-17!102;UBERON:0006601!3.28e-17!102;UBERON:0003080!7.26e-17!40;UBERON:0002780!3.52e-16!39;UBERON:0001890!3.52e-16!39;UBERON:0006240!3.52e-16!39;UBERON:0002791!3.32e-15!29;UBERON:0003528!3.32e-15!29;UBERON:0001893!3.32e-15!29;UBERON:0007811!3.97e-15!86;UBERON:0000153!7.85e-13!94;UBERON:0000956!4.06e-10!21;UBERON:0001869!4.06e-10!21;UBERON:0000203!4.06e-10!21;UBERON:0002619!4.40e-08!17;UBERON:0000025!7.62e-08!114;UBERON:0002021!2.71e-07!10;UBERON:0000411!2.71e-07!10;UBERON:0001950!2.71e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.10e-36,54;UBERON:0002020,1.36e-35,34;UBERON:0001049,6.24e-35,52;UBERON:0005068,6.24e-35,52;UBERON:0006241,6.24e-35,52;UBERON:0007135,6.24e-35,52;UBERON:0002346,8.80e-34,64;UBERON:0003075,8.80e-34,64;UBERON:0007284,8.80e-34,64;UBERON:0001017,2.50e-32,73;UBERON:0001016,4.33e-31,75;UBERON:0003528,3.19e-29,29;UBERON:0002791,3.19e-29,29;UBERON:0001893,3.19e-29,29;UBERON:0000955,1.46e-28,47;UBERON:0006238,1.46e-28,47;UBERON:0010371,5.92e-28,73;UBERON:0004121,1.24e-27,95;UBERON:0000924,1.24e-27,95;UBERON:0006601,1.24e-27,95;UBERON:0002616,1.85e-27,46;UBERON:0003056,1.86e-25,49;UBERON:0003080,2.35e-24,40;UBERON:0002780,3.95e-23,39;UBERON:0001890,3.95e-23,39;UBERON:0006240,3.95e-23,39;UBERON:0010314,1.92e-19,92;UBERON:0000956,2.31e-19,21;UBERON:0001869,2.31e-19,21;UBERON:0000203,2.31e-19,21;UBERON:0002619,1.93e-15,17;UBERON:0002021,1.61e-12,10;UBERON:0000411,1.61e-12,10;UBERON:0001950,1.61e-12,10;UBERON:0000025,1.40e-11,114;UBERON:0002420,5.70e-11,8;UBERON:0007245,5.70e-11,8;UBERON:0010009,5.70e-11,8;UBERON:0010011,5.70e-11,8;UBERON:0000454,5.70e-11,8;UBERON:0003076,8.55e-11,12;UBERON:0003057,8.55e-11,12;UBERON:0004111,4.76e-10,122;UBERON:0002240,1.01e-08,6;UBERON:0005174,1.01e-08,6;UBERON:0001137,1.01e-08,6;UBERON:0000483,1.73e-07,174;UBERON:0000369,2.14e-07,5;UBERON:0002435,2.14e-07,5;UBERON:0001948,2.14e-07,5;UBERON:0002315,2.14e-07,5;UBERON:0000204,2.14e-07,5;UBERON:0010082,2.14e-07,5;UBERON:0000119,2.95e-07,176;UBERON:0011216,8.02e-07,194
|phase1_expression=0.160148847104794,0,0,0,0,0,0,2.32421982194837,2.81577444303333,0.936258105287974,1.19852577757853,0.239316476986009,0.684802919724823,1.22388563386596,0,0,0,0,0,0,1.27564935226605,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,1.45072428402269,0.672187598284928,0,0,0,4.24864567805155,4.23192783417626,1.90149421051854,0,0,0.449949858640699,0,0,0,0,1.76272340924412,2.02508907497536,1.05162480675691,3.71346279724945,1.32521124570968,3.1847607795888,2.58782771749238,1.83843757322004,1.10115880999389,3.57524546638526,1.68967186581868,4.61602007055678,4.48289453651807,1.56274011167028,4.18774498502071,2.25105044012672,3.81995619442025,2.94628585473668,3.98640706237488,4.65998614563251,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,3.51336956413857,4.1889341362691,0.255457055208591,0,0,0,3.74476598512057,1.83000241127451,4.02093926761166,4.34560800480691,4.85859368927628,2.28566849015516,2.75810147215188,0,0,0,1.68353484709179,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,1.02054748726992,1.0249097622788,1.12442069471675,3.10444044886819,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.268412837520744,3.15434922846191,3.2929475961371,0,0,0.213288250535234,0,0.128867461322093,0.605050573870028,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0.442830443938806,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,1.10732344824387,1.2756381492599,1.14704320301017,0.690739927463582,0.723245292907558,0,0,0,0,2.56880943980467,3.16471553798949,0,0,0,0,0,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0.395287777946524,2.57057053137446,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0.713475270408282,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.180938774784468,0,0.164140899745061,0,4.07935664423121,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,1.8228613878153,2.30690557736564,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,1.38097570952153,2.86447756719698,4.46818274093588,1.37016503954128,3.0215755895588,3.37511250115903,2.2516060161211,1.81256963593682,5.1776031175182,0.207574695168353,1.59609949360412,0.341467211508268,0.486213434136588,0.838452650511929,1.10306105070008,0,0.618105171716683,0.320919209591815,0.505394423527595,1.2673964994512,0.754505365544305,0.280924522409647,0.576226371643824,0.918967503289812,1.90517476513229,0.927074607558844,0.964546102318525,0.824171801606613,0.735994600671987,1.02860775715625,0.177475806159338,0.238436189947321,0.726732083161643,0.282328141245992,0.592302255241736,0.548783918618318,1.05227884575137,0.271608227691724,0.561142271657738,0.949080144993393,0.591026894253381,0.409231043169689,1.08455788830176,0.385813221962283,2.24829520144151,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,2.32421982194837,2.81577444303333,0.936258105287974,1.19852577757853,0.239316476986009,0.684802919724823,1.22388563386596,0,0,0,0,0,0,1.27564935226605,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,1.45072428402269,0.672187598284928,0,0,0,4.24864567805155,4.23192783417626,1.90149421051854,0,0,0.449949858640699,0,0,0,0,1.76272340924412,2.02508907497536,1.05162480675691,3.71346279724945,1.32521124570968,3.1847607795888,2.58782771749238,1.83843757322004,1.10115880999389,3.57524546638526,1.68967186581868,4.61602007055678,4.48289453651807,1.56274011167028,4.18774498502071,2.25105044012672,3.81995619442025,2.94628585473668,3.98640706237488,4.65998614563251,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,3.51336956413857,4.1889341362691,0.255457055208591,0,0,0,3.74476598512057,1.83000241127451,4.02093926761166,4.34560800480691,4.85859368927628,2.28566849015516,2.75810147215188,0,0,0,1.68353484709179,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,1.02054748726992,1.0249097622788,1.12442069471675,3.10444044886819,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.268412837520744,3.15434922846191,3.2929475961371,0,0,0.213288250535234,0,0.128867461322093,0.605050573870028,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0.442830443938806,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,1.10732344824387,1.2756381492599,1.14704320301017,0.690739927463582,0.723245292907558,0,0,0,0,2.56880943980467,3.16471553798949,0,0,0,0,0,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0.395287777946524,2.57057053137446,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0.713475270408282,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.180938774784468,0,0.164140899745061,0,4.07935664423121,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,1.8228613878153,2.30690557736564,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,1.38097570952153,2.86447756719698,4.46818274093588,1.37016503954128,3.0215755895588,3.37511250115903,2.2516060161211,1.81256963593682,5.1776031175182,0.207574695168353,1.59609949360412,0.341467211508268,0.486213434136588,0.838452650511929,1.10306105070008,0,0.618105171716683,0.320919209591815,0.505394423527595,1.2673964994512,0.754505365544305,0.280924522409647,0.576226371643824,0.918967503289812,1.90517476513229,0.927074607558844,0.964546102318525,0.824171801606613,0.735994600671987,1.02860775715625,0.177475806159338,0.238436189947321,0.726732083161643,0.282328141245992,0.592302255241736,0.548783918618318,1.05227884575137,0.271608227691724,0.561142271657738,0.949080144993393,0.591026894253381,0.409231043169689,1.08455788830176,0.385813221962283,2.24829520144151,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p3@Tbc1d30
}}
}}

Latest revision as of 16:28, 25 September 2015

Short description:p3@Tbc1d30
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tbc1d30_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 137bp_to_ENSMUST00000064107, NM_029057, uc007hfm.2_5end
EntrezGene:Tbc1d30
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tbc1d30

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.10e-3654
gray matter1.36e-3534
neural tube6.24e-3552
neural rod6.24e-3552
future spinal cord6.24e-3552
neural keel6.24e-3552
neurectoderm8.80e-3464
neural plate8.80e-3464
presumptive neural plate8.80e-3464
central nervous system2.50e-3273
nervous system4.33e-3175
brain grey matter3.19e-2929
regional part of telencephalon3.19e-2929
telencephalon3.19e-2929
brain1.46e-2847
future brain1.46e-2847
ecto-epithelium5.92e-2873
ectoderm-derived structure1.24e-2795
ectoderm1.24e-2795
presumptive ectoderm1.24e-2795
regional part of brain1.85e-2746
pre-chordal neural plate1.86e-2549
anterior neural tube2.35e-2440
regional part of forebrain3.95e-2339
forebrain3.95e-2339
future forebrain3.95e-2339
structure with developmental contribution from neural crest1.92e-1992
cerebral cortex2.31e-1921
cerebral hemisphere2.31e-1921
pallium2.31e-1921
regional part of cerebral cortex1.93e-1517
occipital lobe1.61e-1210
visual cortex1.61e-1210
neocortex1.61e-1210
tube1.40e-11114
basal ganglion5.70e-118
nuclear complex of neuraxis5.70e-118
aggregate regional part of brain5.70e-118
collection of basal ganglia5.70e-118
cerebral subcortex5.70e-118
posterior neural tube8.55e-1112
chordal neural plate8.55e-1112
anatomical conduit4.76e-10122
spinal cord1.01e-086
dorsal region element1.01e-086
dorsum1.01e-086
epithelium1.73e-07174
corpus striatum2.14e-075
striatum2.14e-075
regional part of spinal cord2.14e-075
gray matter of spinal cord2.14e-075
ventral part of telencephalon2.14e-075
future corpus striatum2.14e-075
cell layer2.95e-07176
organ system subdivision8.02e-07194
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