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FFCP PHASE1:Mm9::chr10:127058298..127058314,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:127058298..127058314,-
|DHSsupport=NA
|short_description=p6@Lrp1
|DPIdataset=NA
|description=CAGE_peak_6_at_Lrp1_5end
|association_with_transcript=-94bp_to_ENSMUST00000049149,ENSMUST00000125480,NM_008512,uc007hjx.1,uc007hjy.1,uc007hjz.1_5end
|EntrezGene=16971
|EntrezGene=16971
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q91ZX7,Q3U454,Q3U5J2
|UniProt=Q91ZX7,Q3U454,Q3U5J2
|association_with_transcript=-94bp_to_ENSMUST00000049149,ENSMUST00000125480,NM_008512,uc007hjx.1,uc007hjy.1,uc007hjz.1_5end
|cluster_id=chr10:127058298..127058314,-
|description=CAGE_peak_6_at_Lrp1_5end
|id=chr10:127058298..127058314,-
|ontology_enrichment_celltype=CL:0000117!7.40e-17!23;CL:0000337!7.40e-17!23;CL:0000540!8.08e-16!33;CL:0000047!8.08e-16!33;CL:0000031!8.08e-16!33;CL:0000404!8.08e-16!33;CL:0000221!4.81e-14!44;CL:0000133!4.81e-14!44;CL:0002319!1.42e-13!43;CL:0000393!4.07e-12!39;CL:0000211!4.07e-12!39;CL:0000055!2.89e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-49,23;CL:0000337,1.43e-49,23;CL:0000540,2.18e-36,33;CL:0000047,2.18e-36,33;CL:0000031,2.18e-36,33;CL:0000404,2.18e-36,33;CL:0000393,5.02e-30,39;CL:0000211,5.02e-30,39;CL:0002319,9.06e-27,43;CL:0000221,4.77e-26,44;CL:0000133,4.77e-26,44;CL:0002609,1.15e-16,6;CL:0002321,5.22e-16,70;CL:0000723,4.94e-10,91;CL:0000048,4.94e-10,91;CL:0002613,9.06e-10,3;CL:0000120,2.23e-09,3;CL:0000034,4.13e-09,97;CL:0002608,4.73e-09,3;CL:0002612,7.28e-09,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.13e-27!73;UBERON:0005743!2.13e-27!73;UBERON:0000073!6.98e-27!75;UBERON:0001016!6.98e-27!75;UBERON:0001049!1.01e-22!52;UBERON:0005068!1.01e-22!52;UBERON:0006241!1.01e-22!52;UBERON:0007135!1.01e-22!52;UBERON:0004121!1.98e-22!102;UBERON:0000924!1.98e-22!102;UBERON:0006601!1.98e-22!102;UBERON:0002346!2.46e-21!71;UBERON:0003075!2.46e-21!71;UBERON:0007284!2.46e-21!71;UBERON:0000033!3.64e-21!63;UBERON:0000955!6.03e-21!50;UBERON:0006238!6.03e-21!50;UBERON:0002616!2.37e-20!49;UBERON:0003056!9.52e-18!49;UBERON:0003080!4.19e-17!40;UBERON:0002780!7.61e-17!39;UBERON:0001890!7.61e-17!39;UBERON:0006240!7.61e-17!39;UBERON:0002020!1.45e-15!34;UBERON:0002791!3.21e-12!29;UBERON:0003528!3.21e-12!29;UBERON:0001893!3.21e-12!29;UBERON:0007811!9.87e-11!86;UBERON:0000153!3.52e-10!94;UBERON:0000956!1.17e-07!21;UBERON:0001869!1.17e-07!21;UBERON:0000203!1.17e-07!21;UBERON:0000025!4.47e-07!114;UBERON:0004111!5.70e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.44e-30,73;UBERON:0001016,2.28e-29,75;UBERON:0000073,6.60e-29,54;UBERON:0002020,2.08e-28,34;UBERON:0001049,1.04e-27,52;UBERON:0005068,1.04e-27,52;UBERON:0006241,1.04e-27,52;UBERON:0007135,1.04e-27,52;UBERON:0004121,6.70e-22,95;UBERON:0000924,6.70e-22,95;UBERON:0006601,6.70e-22,95;UBERON:0002346,1.72e-21,64;UBERON:0003075,1.72e-21,64;UBERON:0007284,1.72e-21,64;UBERON:0002780,5.92e-19,39;UBERON:0001890,5.92e-19,39;UBERON:0006240,5.92e-19,39;UBERON:0003528,1.76e-18,29;UBERON:0002791,1.76e-18,29;UBERON:0001893,1.76e-18,29;UBERON:0003080,2.23e-18,40;UBERON:0010371,3.61e-18,73;UBERON:0002616,2.35e-17,46;UBERON:0000955,6.79e-17,47;UBERON:0006238,6.79e-17,47;UBERON:0002240,9.20e-16,6;UBERON:0005174,9.20e-16,6;UBERON:0001137,9.20e-16,6;UBERON:0003056,2.99e-14,49;UBERON:0001948,1.60e-13,5;UBERON:0002315,1.60e-13,5;UBERON:0010314,2.74e-13,92;UBERON:0002420,2.20e-12,8;UBERON:0007245,2.20e-12,8;UBERON:0010009,2.20e-12,8;UBERON:0010011,2.20e-12,8;UBERON:0000454,2.20e-12,8;UBERON:0003076,4.69e-10,12;UBERON:0003057,4.69e-10,12;UBERON:0000369,7.94e-10,5;UBERON:0002435,7.94e-10,5;UBERON:0000204,7.94e-10,5;UBERON:0010082,7.94e-10,5;UBERON:0000025,1.13e-09,114;UBERON:0000956,4.37e-09,21;UBERON:0001869,4.37e-09,21;UBERON:0000203,4.37e-09,21;UBERON:0002257,7.28e-09,3;UBERON:0004111,1.11e-08,122;UBERON:0011216,2.73e-08,194
|phase1_expression=0.80074423552397,1.04692622291808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.198581902401771,0,0,0,0.57423196411502,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.872100625521786,0.439372365468944,0,0.839918529752175,0,0,0,0,0,0,0,4.04632921719196,2.11596391708813,3.1691570175309,0,0,0.449949858640699,0.988866362566974,0,0,0.768436610643109,2.07379224616955,3.51015439662396,2.52389953621658,1.99955689082663,1.76694832761291,1.10241719293459,2.87536413054709,5.51531271966013,1.10115880999389,0.766124028511126,2.4577045320999,2.63772575460388,6.03818447775904,5.2091337055676,2.23346399201105,0.56276261003168,1.06958773443767,1.17851434189467,1.85083185038834,5.03278503728312,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,2.51308704225729,0.869121600961382,1.02286182932132,1.0389402227978,0.648965052271031,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.900310649026746,0.452114453507145,0.680364991513279,0.768682321709099,0.937017245597288,0,0,0.189106080167819,0.703804496655795,0,0.834141747676794,0.348252166522167,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0.268412837520744,0.841159794256509,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,1.17211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,1.13230612315533,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0.35613120733451,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.643011105094777,0.709360934569094,1.24858172321449,0.987294123612726,2.13125464380219,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.375364950902364,0,0.214368379079066,0.501572104035363,1.12950368523413,1.38097570952153,0.572895513439397,0.515559547031063,0.685082519770642,0,0,1.80128481289688,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.640251524048693,0.229741875822453,0,0.695305955669133,0.578727661391115,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0.581385666529314,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0,0.231867835620421
|phase1_expression=0.80074423552397,1.04692622291808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.198581902401771,0,0,0,0.57423196411502,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.872100625521786,0.439372365468944,0,0.839918529752175,0,0,0,0,0,0,0,4.04632921719196,2.11596391708813,3.1691570175309,0,0,0.449949858640699,0.988866362566974,0,0,0.768436610643109,2.07379224616955,3.51015439662396,2.52389953621658,1.99955689082663,1.76694832761291,1.10241719293459,2.87536413054709,5.51531271966013,1.10115880999389,0.766124028511126,2.4577045320999,2.63772575460388,6.03818447775904,5.2091337055676,2.23346399201105,0.56276261003168,1.06958773443767,1.17851434189467,1.85083185038834,5.03278503728312,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,2.51308704225729,0.869121600961382,1.02286182932132,1.0389402227978,0.648965052271031,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.900310649026746,0.452114453507145,0.680364991513279,0.768682321709099,0.937017245597288,0,0,0.189106080167819,0.703804496655795,0,0.834141747676794,0.348252166522167,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0.268412837520744,0.841159794256509,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,1.17211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,1.13230612315533,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0.35613120733451,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.643011105094777,0.709360934569094,1.24858172321449,0.987294123612726,2.13125464380219,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.375364950902364,0,0.214368379079066,0.501572104035363,1.12950368523413,1.38097570952153,0.572895513439397,0.515559547031063,0.685082519770642,0,0,1.80128481289688,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.640251524048693,0.229741875822453,0,0.695305955669133,0.578727661391115,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0.581385666529314,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0,0.231867835620421
|short_description=p6@Lrp1
}}
}}

Latest revision as of 18:02, 25 September 2015

Short description:p6@Lrp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Lrp1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -94bp_to_ENSMUST00000049149, ENSMUST00000125480, NM_008512, uc007hjx.1, uc007hjy.1, uc007hjz.1_5end
EntrezGene:Lrp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Lrp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.44e-3073
nervous system2.28e-2975
regional part of nervous system6.60e-2954
gray matter2.08e-2834
neural tube1.04e-2752
neural rod1.04e-2752
future spinal cord1.04e-2752
neural keel1.04e-2752
ectoderm-derived structure6.70e-2295
ectoderm6.70e-2295
presumptive ectoderm6.70e-2295
neurectoderm1.72e-2164
neural plate1.72e-2164
presumptive neural plate1.72e-2164
regional part of forebrain5.92e-1939
forebrain5.92e-1939
future forebrain5.92e-1939
brain grey matter1.76e-1829
regional part of telencephalon1.76e-1829
telencephalon1.76e-1829
anterior neural tube2.23e-1840
ecto-epithelium3.61e-1873
regional part of brain2.35e-1746
brain6.79e-1747
future brain6.79e-1747
spinal cord9.20e-166
dorsal region element9.20e-166
dorsum9.20e-166
pre-chordal neural plate2.99e-1449
regional part of spinal cord1.60e-135
gray matter of spinal cord1.60e-135
structure with developmental contribution from neural crest2.74e-1392
basal ganglion2.20e-128
nuclear complex of neuraxis2.20e-128
aggregate regional part of brain2.20e-128
collection of basal ganglia2.20e-128
cerebral subcortex2.20e-128
posterior neural tube4.69e-1012
chordal neural plate4.69e-1012
corpus striatum7.94e-105
striatum7.94e-105
ventral part of telencephalon7.94e-105
future corpus striatum7.94e-105
tube1.13e-09114
cerebral cortex4.37e-0921
cerebral hemisphere4.37e-0921
pallium4.37e-0921
ventral horn of spinal cord7.28e-093
anatomical conduit1.11e-08122
organ system subdivision2.73e-08194
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