FFCP PHASE1:Mm9::chr10:127058298..127058314,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16971 | |EntrezGene=16971 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q91ZX7,Q3U454,Q3U5J2 | |UniProt=Q91ZX7,Q3U454,Q3U5J2 | ||
|association_with_transcript=-94bp_to_ENSMUST00000049149,ENSMUST00000125480,NM_008512,uc007hjx.1,uc007hjy.1,uc007hjz.1_5end | |association_with_transcript=-94bp_to_ENSMUST00000049149,ENSMUST00000125480,NM_008512,uc007hjx.1,uc007hjy.1,uc007hjz.1_5end | ||
|cluster_id=chr10:127058298..127058314,- | |||
|description=CAGE_peak_6_at_Lrp1_5end | |description=CAGE_peak_6_at_Lrp1_5end | ||
|id=chr10:127058298..127058314,- | |id=chr10:127058298..127058314,- | ||
|ontology_enrichment_celltype=CL:0000117!7.40e-17!23;CL:0000337!7.40e-17!23;CL:0000540!8.08e-16!33;CL:0000047!8.08e-16!33;CL:0000031!8.08e-16!33;CL:0000404!8.08e-16!33;CL:0000221!4.81e-14!44;CL:0000133!4.81e-14!44;CL:0002319!1.42e-13!43;CL:0000393!4.07e-12!39;CL:0000211!4.07e-12!39;CL:0000055!2.89e-10!50 | |ontology_enrichment_celltype=CL:0000117!7.40e-17!23;CL:0000337!7.40e-17!23;CL:0000540!8.08e-16!33;CL:0000047!8.08e-16!33;CL:0000031!8.08e-16!33;CL:0000404!8.08e-16!33;CL:0000221!4.81e-14!44;CL:0000133!4.81e-14!44;CL:0002319!1.42e-13!43;CL:0000393!4.07e-12!39;CL:0000211!4.07e-12!39;CL:0000055!2.89e-10!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-49,23;CL:0000337,1.43e-49,23;CL:0000540,2.18e-36,33;CL:0000047,2.18e-36,33;CL:0000031,2.18e-36,33;CL:0000404,2.18e-36,33;CL:0000393,5.02e-30,39;CL:0000211,5.02e-30,39;CL:0002319,9.06e-27,43;CL:0000221,4.77e-26,44;CL:0000133,4.77e-26,44;CL:0002609,1.15e-16,6;CL:0002321,5.22e-16,70;CL:0000723,4.94e-10,91;CL:0000048,4.94e-10,91;CL:0002613,9.06e-10,3;CL:0000120,2.23e-09,3;CL:0000034,4.13e-09,97;CL:0002608,4.73e-09,3;CL:0002612,7.28e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.13e-27!73;UBERON:0005743!2.13e-27!73;UBERON:0000073!6.98e-27!75;UBERON:0001016!6.98e-27!75;UBERON:0001049!1.01e-22!52;UBERON:0005068!1.01e-22!52;UBERON:0006241!1.01e-22!52;UBERON:0007135!1.01e-22!52;UBERON:0004121!1.98e-22!102;UBERON:0000924!1.98e-22!102;UBERON:0006601!1.98e-22!102;UBERON:0002346!2.46e-21!71;UBERON:0003075!2.46e-21!71;UBERON:0007284!2.46e-21!71;UBERON:0000033!3.64e-21!63;UBERON:0000955!6.03e-21!50;UBERON:0006238!6.03e-21!50;UBERON:0002616!2.37e-20!49;UBERON:0003056!9.52e-18!49;UBERON:0003080!4.19e-17!40;UBERON:0002780!7.61e-17!39;UBERON:0001890!7.61e-17!39;UBERON:0006240!7.61e-17!39;UBERON:0002020!1.45e-15!34;UBERON:0002791!3.21e-12!29;UBERON:0003528!3.21e-12!29;UBERON:0001893!3.21e-12!29;UBERON:0007811!9.87e-11!86;UBERON:0000153!3.52e-10!94;UBERON:0000956!1.17e-07!21;UBERON:0001869!1.17e-07!21;UBERON:0000203!1.17e-07!21;UBERON:0000025!4.47e-07!114;UBERON:0004111!5.70e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.44e-30,73;UBERON:0001016,2.28e-29,75;UBERON:0000073,6.60e-29,54;UBERON:0002020,2.08e-28,34;UBERON:0001049,1.04e-27,52;UBERON:0005068,1.04e-27,52;UBERON:0006241,1.04e-27,52;UBERON:0007135,1.04e-27,52;UBERON:0004121,6.70e-22,95;UBERON:0000924,6.70e-22,95;UBERON:0006601,6.70e-22,95;UBERON:0002346,1.72e-21,64;UBERON:0003075,1.72e-21,64;UBERON:0007284,1.72e-21,64;UBERON:0002780,5.92e-19,39;UBERON:0001890,5.92e-19,39;UBERON:0006240,5.92e-19,39;UBERON:0003528,1.76e-18,29;UBERON:0002791,1.76e-18,29;UBERON:0001893,1.76e-18,29;UBERON:0003080,2.23e-18,40;UBERON:0010371,3.61e-18,73;UBERON:0002616,2.35e-17,46;UBERON:0000955,6.79e-17,47;UBERON:0006238,6.79e-17,47;UBERON:0002240,9.20e-16,6;UBERON:0005174,9.20e-16,6;UBERON:0001137,9.20e-16,6;UBERON:0003056,2.99e-14,49;UBERON:0001948,1.60e-13,5;UBERON:0002315,1.60e-13,5;UBERON:0010314,2.74e-13,92;UBERON:0002420,2.20e-12,8;UBERON:0007245,2.20e-12,8;UBERON:0010009,2.20e-12,8;UBERON:0010011,2.20e-12,8;UBERON:0000454,2.20e-12,8;UBERON:0003076,4.69e-10,12;UBERON:0003057,4.69e-10,12;UBERON:0000369,7.94e-10,5;UBERON:0002435,7.94e-10,5;UBERON:0000204,7.94e-10,5;UBERON:0010082,7.94e-10,5;UBERON:0000025,1.13e-09,114;UBERON:0000956,4.37e-09,21;UBERON:0001869,4.37e-09,21;UBERON:0000203,4.37e-09,21;UBERON:0002257,7.28e-09,3;UBERON:0004111,1.11e-08,122;UBERON:0011216,2.73e-08,194 | |||
|phase1_expression=0.80074423552397,1.04692622291808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.198581902401771,0,0,0,0.57423196411502,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.872100625521786,0.439372365468944,0,0.839918529752175,0,0,0,0,0,0,0,4.04632921719196,2.11596391708813,3.1691570175309,0,0,0.449949858640699,0.988866362566974,0,0,0.768436610643109,2.07379224616955,3.51015439662396,2.52389953621658,1.99955689082663,1.76694832761291,1.10241719293459,2.87536413054709,5.51531271966013,1.10115880999389,0.766124028511126,2.4577045320999,2.63772575460388,6.03818447775904,5.2091337055676,2.23346399201105,0.56276261003168,1.06958773443767,1.17851434189467,1.85083185038834,5.03278503728312,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,2.51308704225729,0.869121600961382,1.02286182932132,1.0389402227978,0.648965052271031,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.900310649026746,0.452114453507145,0.680364991513279,0.768682321709099,0.937017245597288,0,0,0.189106080167819,0.703804496655795,0,0.834141747676794,0.348252166522167,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0.268412837520744,0.841159794256509,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,1.17211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,1.13230612315533,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0.35613120733451,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.643011105094777,0.709360934569094,1.24858172321449,0.987294123612726,2.13125464380219,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.375364950902364,0,0.214368379079066,0.501572104035363,1.12950368523413,1.38097570952153,0.572895513439397,0.515559547031063,0.685082519770642,0,0,1.80128481289688,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.640251524048693,0.229741875822453,0,0.695305955669133,0.578727661391115,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0.581385666529314,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0,0.231867835620421 | |phase1_expression=0.80074423552397,1.04692622291808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.198581902401771,0,0,0,0.57423196411502,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.872100625521786,0.439372365468944,0,0.839918529752175,0,0,0,0,0,0,0,4.04632921719196,2.11596391708813,3.1691570175309,0,0,0.449949858640699,0.988866362566974,0,0,0.768436610643109,2.07379224616955,3.51015439662396,2.52389953621658,1.99955689082663,1.76694832761291,1.10241719293459,2.87536413054709,5.51531271966013,1.10115880999389,0.766124028511126,2.4577045320999,2.63772575460388,6.03818447775904,5.2091337055676,2.23346399201105,0.56276261003168,1.06958773443767,1.17851434189467,1.85083185038834,5.03278503728312,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,2.51308704225729,0.869121600961382,1.02286182932132,1.0389402227978,0.648965052271031,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.900310649026746,0.452114453507145,0.680364991513279,0.768682321709099,0.937017245597288,0,0,0.189106080167819,0.703804496655795,0,0.834141747676794,0.348252166522167,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0.268412837520744,0.841159794256509,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,1.17211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,1.13230612315533,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0.35613120733451,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.643011105094777,0.709360934569094,1.24858172321449,0.987294123612726,2.13125464380219,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.375364950902364,0,0.214368379079066,0.501572104035363,1.12950368523413,1.38097570952153,0.572895513439397,0.515559547031063,0.685082519770642,0,0,1.80128481289688,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.640251524048693,0.229741875822453,0,0.695305955669133,0.578727661391115,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0.581385666529314,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0,0.231867835620421 | ||
|short_description=p6@Lrp1 | |short_description=p6@Lrp1 | ||
}} | }} |
Latest revision as of 18:02, 25 September 2015
Short description: | p6@Lrp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lrp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -94bp_to_ENSMUST00000049149, ENSMUST00000125480, NM_008512, uc007hjx.1, uc007hjy.1, uc007hjz.1_5end |
EntrezGene: | Lrp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.43e-49 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-49 | 23 |
neuron | 2.18e-36 | 33 |
neuronal stem cell | 2.18e-36 | 33 |
neuroblast | 2.18e-36 | 33 |
electrically signaling cell | 2.18e-36 | 33 |
electrically responsive cell | 5.02e-30 | 39 |
electrically active cell | 5.02e-30 | 39 |
neural cell | 9.06e-27 | 43 |
ectodermal cell | 4.77e-26 | 44 |
neurectodermal cell | 4.77e-26 | 44 |
neuron of cerebral cortex | 1.15e-16 | 6 |
embryonic cell | 5.22e-16 | 70 |
somatic stem cell | 4.94e-10 | 91 |
multi fate stem cell | 4.94e-10 | 91 |
striatum neuron | 9.06e-10 | 3 |
granule cell | 2.23e-09 | 3 |
stem cell | 4.13e-09 | 97 |
hippocampal neuron | 4.73e-09 | 3 |
neuron of the ventral spinal cord | 7.28e-09 | 3 |