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FFCP PHASE1:Mm9::chr10:42580582..42580616,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268297
|EntrezGene=268297
|HGNC=
|HGNC=
|MCL_coexpression_id=40
|TSSclassifier=NA
|UniProt=Q80VG1
|UniProt=Q80VG1
|association_with_transcript=0bp_to_ENSMUST00000105494_5end
|association_with_transcript=0bp_to_ENSMUST00000105494_5end
|cluster_id=chr10:42580582..42580616,+
|description=CAGE_peak_2_at_Scml4_5end
|description=CAGE_peak_2_at_Scml4_5end
|id=chr10:42580582..42580616,+
|id=chr10:42580582..42580616,+
|ontology_enrichment_celltype=CL:0000838!2.07e-08!12;CL:0000084!9.34e-08!11;CL:0000827!9.34e-08!11;CL:0000542!2.91e-07!13;CL:0000051!2.91e-07!13;CL:0000791!6.21e-07!9;CL:0000789!6.21e-07!9;CL:0002420!6.21e-07!9;CL:0002419!6.21e-07!9;CL:0000790!6.21e-07!9
|ontology_enrichment_celltype=CL:0000838!2.07e-08!12;CL:0000084!9.34e-08!11;CL:0000827!9.34e-08!11;CL:0000542!2.91e-07!13;CL:0000051!2.91e-07!13;CL:0000791!6.21e-07!9;CL:0000789!6.21e-07!9;CL:0002420!6.21e-07!9;CL:0002419!6.21e-07!9;CL:0000790!6.21e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,2.37e-13,12;CL:0000542,4.37e-12,13;CL:0000051,4.37e-12,13;CL:0000084,4.39e-12,11;CL:0000827,4.39e-12,11;CL:0002031,7.47e-12,25;CL:0000791,1.97e-10,9;CL:0000789,1.97e-10,9;CL:0002420,1.97e-10,9;CL:0002419,1.97e-10,9;CL:0000790,1.97e-10,9;CL:0000624,5.13e-09,8;CL:0000738,1.55e-08,17;CL:0002087,1.55e-08,17;CL:0000988,3.02e-08,32;CL:0002032,3.02e-08,32;CL:0000037,3.02e-08,32;CL:0000837,3.02e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!2.03e-12!29;UBERON:0002193!4.57e-11!48;UBERON:0003408!4.10e-10!24;UBERON:0002370!6.25e-10!23;UBERON:0000974!6.25e-10!23;UBERON:0004807!6.25e-10!23;UBERON:0005058!6.25e-10!23;UBERON:0003351!6.25e-10!23;UBERON:0009113!6.25e-10!23;UBERON:0003295!6.25e-10!23;UBERON:0009722!6.25e-10!23;UBERON:0005562!6.25e-10!23;UBERON:0007690!6.25e-10!23;UBERON:0002390!1.68e-09!45;UBERON:0003061!1.68e-09!45;UBERON:0006562!4.59e-09!24;UBERON:0001557!4.59e-09!24;UBERON:0001042!4.59e-09!24;UBERON:0008814!4.59e-09!24;UBERON:0009145!4.59e-09!24;UBERON:0000064!3.34e-07!99;UBERON:0000072!6.29e-07!27;UBERON:0001004!6.33e-07!42
|ontology_enrichment_uberon=UBERON:0004177!2.03e-12!29;UBERON:0002193!4.57e-11!48;UBERON:0003408!4.10e-10!24;UBERON:0002370!6.25e-10!23;UBERON:0000974!6.25e-10!23;UBERON:0004807!6.25e-10!23;UBERON:0005058!6.25e-10!23;UBERON:0003351!6.25e-10!23;UBERON:0009113!6.25e-10!23;UBERON:0003295!6.25e-10!23;UBERON:0009722!6.25e-10!23;UBERON:0005562!6.25e-10!23;UBERON:0007690!6.25e-10!23;UBERON:0002390!1.68e-09!45;UBERON:0003061!1.68e-09!45;UBERON:0006562!4.59e-09!24;UBERON:0001557!4.59e-09!24;UBERON:0001042!4.59e-09!24;UBERON:0008814!4.59e-09!24;UBERON:0009145!4.59e-09!24;UBERON:0000064!3.34e-07!99;UBERON:0000072!6.29e-07!27;UBERON:0001004!6.33e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.30e-21,48;UBERON:0002405,5.30e-21,48;UBERON:0004177,3.69e-20,29;UBERON:0005057,3.69e-20,29;UBERON:0002390,7.16e-18,45;UBERON:0003061,7.16e-18,45;UBERON:0002370,1.57e-17,23;UBERON:0000974,1.57e-17,23;UBERON:0004807,1.57e-17,23;UBERON:0005058,1.57e-17,23;UBERON:0003351,1.57e-17,23;UBERON:0009113,1.57e-17,23;UBERON:0003295,1.57e-17,23;UBERON:0009722,1.57e-17,23;UBERON:0005562,1.57e-17,23;UBERON:0007690,1.57e-17,23;UBERON:0006562,1.47e-16,24;UBERON:0003408,1.47e-16,24;UBERON:0001557,1.47e-16,24;UBERON:0001042,1.47e-16,24;UBERON:0008814,1.47e-16,24;UBERON:0009145,1.47e-16,24;UBERON:0000077,1.70e-15,35;UBERON:0000072,4.33e-14,27;UBERON:0000065,5.42e-13,41;UBERON:0001004,1.61e-12,42;UBERON:0007811,3.23e-09,36;UBERON:0001007,5.08e-07,116;UBERON:0001555,5.08e-07,116;UBERON:0007026,5.08e-07,116;UBERON:0000153,6.70e-07,43;UBERON:0004119,9.62e-07,118;UBERON:0000925,9.62e-07,118;UBERON:0006595,9.62e-07,118
|phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,0,1.34303417529512,0.934450562382103,44.805793234227,4.36445038670167,8.89445200023575,1.19852577757853,0.638177271962691,83.203554746566,77.3670561408127,2.99798785634096,3.84703008040669,0.699561878128147,19.0854610041734,20.7042794744666,12.3072999021429,0.935476191661768,1.48936426801328,1.56719873483361,2.71987118748791,2.2940928106717,0.57423196411502,2.58457197695445,1.07735616342945,1.52018735565099,0.504060259519861,1.10865255327652,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,0,0,0,0,0.218025156380447,0.219686182734472,0,0,1.43752564364972,8.72469551500229,31.9159342484992,34.2815675125313,0,0,0,0.606949382578793,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.857435594504678,0.575072826109418,0,2.20231761998777,0,0.921639199537461,1.58263545276233,2.10421580285542,1.56274011167028,0,1.12552522006336,0.45839474333043,0.589257170947335,0.142371680799103,0.372798891650601,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0,0,1.7127581957859,33.4029869904852,1.1875371125186,0.173485326766136,0.913396434936424,0.230615497256059,0.60289056221049,0.470354828542819,0.502666365318702,0,0.86759614151947,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0.766371165625774,0.479260498023681,0,0,0.748953197024114,0,0.251308704225729,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0,1.24406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0.243206428637567,0,0.219550115291051,0,0,0.102904612379284,1.32167513193519,0.793351699990633,0,0,0,0,0,0.190225626112559,1.42358718463353,0.164698954724011,0.251335208800269,0,0.779856348476481,0,0.648414149624083,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.316182685621286,0.147610147979602,0.627994911365499,0.246794327843601,0,0,0,0,0,0.482354319504834,0,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0.358794827043824,0,2.77129785249907,0,0,0,0,0.167506257441816,0,0.390267295715598,0.472905432318573,0.8858587585951,1.11618338060241,2.94953966488328,2.24490476425664,1.59113964439663,0,0,4.91764273019036,3.58717770196152,0.321101179975584,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,0,1.70219802876894,0,0,0.428674070063185,0,0.713475270408282,0.658196082408484,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.582961673259701,0,5.63873906632914,0.412773735926445,0.555583582109135,2.63715839806567,5.46776910884101,4.80434163733698,0.679913719975421,1.6794174278839,1.24379976423981,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,1.03691978633434,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,11.6924114632426,0.608175645870493,2.05421914329655,3.76770386635606,4.29664069601955,5.16571522431289,6.61074972359829,7.53216588590344,8.88504759543699,9.29723041190998,7.76361625553672,11.8898614502498,11.7378446801202,20.9209654905008,0,0,0,0,0,0.187682475451182,3.6630324853453,0.214368379079066,0,0,0.460325236507177,0,0,1.37016503954128,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0.798049746802062,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.37456602987953,0.320125762024346,0.516919220600519,0,0.347652977834566,0,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.338458431566706,0,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.644613162144895,0,0.661774257358546,0.463735671240843
|phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,0,1.34303417529512,0.934450562382103,44.805793234227,4.36445038670167,8.89445200023575,1.19852577757853,0.638177271962691,83.203554746566,77.3670561408127,2.99798785634096,3.84703008040669,0.699561878128147,19.0854610041734,20.7042794744666,12.3072999021429,0.935476191661768,1.48936426801328,1.56719873483361,2.71987118748791,2.2940928106717,0.57423196411502,2.58457197695445,1.07735616342945,1.52018735565099,0.504060259519861,1.10865255327652,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,0,0,0,0,0.218025156380447,0.219686182734472,0,0,1.43752564364972,8.72469551500229,31.9159342484992,34.2815675125313,0,0,0,0.606949382578793,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.857435594504678,0.575072826109418,0,2.20231761998777,0,0.921639199537461,1.58263545276233,2.10421580285542,1.56274011167028,0,1.12552522006336,0.45839474333043,0.589257170947335,0.142371680799103,0.372798891650601,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0,0,1.7127581957859,33.4029869904852,1.1875371125186,0.173485326766136,0.913396434936424,0.230615497256059,0.60289056221049,0.470354828542819,0.502666365318702,0,0.86759614151947,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0.766371165625774,0.479260498023681,0,0,0.748953197024114,0,0.251308704225729,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0,1.24406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0.243206428637567,0,0.219550115291051,0,0,0.102904612379284,1.32167513193519,0.793351699990633,0,0,0,0,0,0.190225626112559,1.42358718463353,0.164698954724011,0.251335208800269,0,0.779856348476481,0,0.648414149624083,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.316182685621286,0.147610147979602,0.627994911365499,0.246794327843601,0,0,0,0,0,0.482354319504834,0,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0.358794827043824,0,2.77129785249907,0,0,0,0,0.167506257441816,0,0.390267295715598,0.472905432318573,0.8858587585951,1.11618338060241,2.94953966488328,2.24490476425664,1.59113964439663,0,0,4.91764273019036,3.58717770196152,0.321101179975584,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,0,1.70219802876894,0,0,0.428674070063185,0,0.713475270408282,0.658196082408484,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.582961673259701,0,5.63873906632914,0.412773735926445,0.555583582109135,2.63715839806567,5.46776910884101,4.80434163733698,0.679913719975421,1.6794174278839,1.24379976423981,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,1.03691978633434,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,11.6924114632426,0.608175645870493,2.05421914329655,3.76770386635606,4.29664069601955,5.16571522431289,6.61074972359829,7.53216588590344,8.88504759543699,9.29723041190998,7.76361625553672,11.8898614502498,11.7378446801202,20.9209654905008,0,0,0,0,0,0.187682475451182,3.6630324853453,0.214368379079066,0,0,0.460325236507177,0,0,1.37016503954128,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0.798049746802062,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.37456602987953,0.320125762024346,0.516919220600519,0,0.347652977834566,0,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.338458431566706,0,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.644613162144895,0,0.661774257358546,0.463735671240843
|short_description=p2@Scml4
|short_description=p2@Scml4
}}
}}

Latest revision as of 00:44, 26 September 2015

Short description:p2@Scml4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Scml4_5end
Coexpression cluster:MCL_coexpression_mm9:40
Association with transcript: 0bp_to_ENSMUST00000105494_5end
EntrezGene:Scml4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Scml4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E944.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.89
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E483.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E877.37
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.28
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H933.40
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H15.47
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B511.69
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C53.77
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F86.61
thymus, neonate N03.CNhs11137.2104-43C77.53
thymus, neonate N06.CNhs11197.681-26C48.89
thymus, neonate N07.CNhs11211.713-19D39.30
thymus, neonate N10.CNhs11194.748-24E47.76
thymus, neonate N20.CNhs11186.820-7A211.89
thymus, neonate N25.CNhs11125.1362-25G711.74
thymus, neonate N30.CNhs11132.1393-42G220.92
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system5.30e-2148
immune system5.30e-2148
hemopoietic organ3.69e-2029
immune organ3.69e-2029
hematopoietic system7.16e-1845
blood island7.16e-1845
thymus1.57e-1723
neck1.57e-1723
respiratory system epithelium1.57e-1723
hemolymphoid system gland1.57e-1723
pharyngeal epithelium1.57e-1723
thymic region1.57e-1723
pharyngeal gland1.57e-1723
entire pharyngeal arch endoderm1.57e-1723
thymus primordium1.57e-1723
early pharyngeal endoderm1.57e-1723
pharynx1.47e-1624
gland of gut1.47e-1624
upper respiratory tract1.47e-1624
chordate pharynx1.47e-1624
pharyngeal arch system1.47e-1624
pharyngeal region of foregut1.47e-1624
mixed endoderm/mesoderm-derived structure1.70e-1535
segment of respiratory tract4.33e-1427
respiratory tract5.42e-1341
respiratory system1.61e-1242
craniocervical region3.23e-0936
digestive system5.08e-07116
digestive tract5.08e-07116
primitive gut5.08e-07116
anterior region of body6.70e-0743
endoderm-derived structure9.62e-07118
endoderm9.62e-07118
presumptive endoderm9.62e-07118
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