Personal tools

FFCP PHASE1:Mm9::chr11:96213264..96213282,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|EntrezGene=NA
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=103889
|HGNC=
|HGNC=
|MCL_coexpression_id=2011
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr11:96213264..96213282,+
|cluster_id=chr11:96213264..96213282,+
|description=CAGE_peak_5_at_Hoxb2_5end
|id=chr11:96213264..96213282,+
|id=chr11:96213264..96213282,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005177!5.58e-14!85;UBERON:0005157!2.54e-13!27;UBERON:0002100!3.12e-12!98;UBERON:0000489!8.50e-11!21;UBERON:0009569!1.92e-10!66;UBERON:0002048!9.00e-10!14;UBERON:0000117!9.00e-10!14;UBERON:0000171!9.00e-10!14;UBERON:0000170!9.00e-10!14;UBERON:0005597!9.00e-10!14;UBERON:0000118!9.00e-10!14;UBERON:0005153!2.42e-08!17;UBERON:0001008!3.84e-08!17;UBERON:0002113!9.00e-08!14;UBERON:0003918!9.00e-08!14;UBERON:0005095!9.00e-08!14;UBERON:0007687!9.00e-08!14;UBERON:0006554!1.02e-07!16;UBERON:0005178!2.21e-07!17;UBERON:0005181!2.21e-07!17;UBERON:0002224!2.21e-07!17;UBERON:0000915!2.21e-07!17;UBERON:0008947!2.21e-07!17;UBERON:0003258!2.21e-07!17;UBERON:0003104!4.22e-07!131;UBERON:0009142!4.22e-07!131
|ontology_enrichment_uberon=UBERON:0005177!5.58e-14!85;UBERON:0005157!2.54e-13!27;UBERON:0002100!3.12e-12!98;UBERON:0000489!8.50e-11!21;UBERON:0009569!1.92e-10!66;UBERON:0002048!9.00e-10!14;UBERON:0000117!9.00e-10!14;UBERON:0000171!9.00e-10!14;UBERON:0000170!9.00e-10!14;UBERON:0005597!9.00e-10!14;UBERON:0000118!9.00e-10!14;UBERON:0005153!2.42e-08!17;UBERON:0001008!3.84e-08!17;UBERON:0002113!9.00e-08!14;UBERON:0003918!9.00e-08!14;UBERON:0005095!9.00e-08!14;UBERON:0007687!9.00e-08!14;UBERON:0006554!1.02e-07!16;UBERON:0005178!2.21e-07!17;UBERON:0005181!2.21e-07!17;UBERON:0002224!2.21e-07!17;UBERON:0000915!2.21e-07!17;UBERON:0008947!2.21e-07!17;UBERON:0003258!2.21e-07!17;UBERON:0003104!4.22e-07!131;UBERON:0009142!4.22e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0005157,1.20e-13,20;UBERON:0000489,3.00e-13,21;UBERON:0002048,8.11e-13,14;UBERON:0000117,8.11e-13,14;UBERON:0000171,8.11e-13,14;UBERON:0000170,8.11e-13,14;UBERON:0005597,8.11e-13,14;UBERON:0000118,8.11e-13,14;UBERON:0005153,7.86e-11,17;UBERON:0009569,1.49e-10,66;UBERON:0005177,2.83e-10,79;UBERON:0002100,5.22e-10,90;UBERON:0005178,1.31e-09,17;UBERON:0005181,1.31e-09,17;UBERON:0002224,1.31e-09,17;UBERON:0000915,1.31e-09,17;UBERON:0008947,1.31e-09,17;UBERON:0003258,1.31e-09,17;UBERON:0002113,4.07e-09,14;UBERON:0003918,4.07e-09,14;UBERON:0011143,4.07e-09,14;UBERON:0005095,4.07e-09,14;UBERON:0007687,4.07e-09,14;UBERON:0001008,8.60e-08,19;UBERON:0006554,3.02e-07,18;UBERON:0000310,5.25e-07,6;UBERON:0001443,5.25e-07,6;UBERON:0003064,7.49e-07,14
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,2.33166941804883,2.56965453026354,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,1.42825492201902,2.65042249141936,0,0,0,0,0,0,0,0,0,0.837548997004143,0,0.30559649555362,3.24091444021034,1.13897344639282,5.21918448310842,0.075726193333184,0.0755715601067855,4.05810284182349,0,0,0.539703191637817,0,0,0.842666520790511,0.170430322578058,0,0,0,0,0,0,0,0,0.505524445014783,0.68510327831436,0.517875767294343,3.11728492036132,2.25530924795977,1.52232739156071,1.61430848079241,1.50722640552623,1.99900802130698,3.64433114856059,0,1.3013942122792,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0,0.457500602818626,0,0,0,0,0,2.44414473240759,0.870848794270651,3.0326731012041,0,0,0,0,0,0,0,0,0,0.862271971731369,0.945530400839096,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.492502392237286,0,0.146199987425332,0,0,0,0,0,0.793351699990633,5.97207101498655,4.87697010906921,1.67527699718721,2.01683524623343,1.55664630691409,2.85338439168839,0.949058123089023,1.15289268306808,1.25667604400135,2.18852119245266,1.55971269695296,0,0.432276099749388,1.39398891278057,3.79335801906163,2.17072173958485,3.38123207019241,3.05476991767971,4.07300223052014,1.8936671370386,1.89709611372772,2.65698266363284,1.41298855057237,2.46794327843601,0,0.83422552858047,0.786235980452812,0.899448449539415,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,1.43768206527355,1.11642284300551,0.624075346229121,0.505157755894224,1.07638448113147,0,2.95605104266567,4.9267767060326,8.31121379854332,6.78980343100753,6.33663670378956,4.35516269348721,3.80869825417622,1.75620283072019,6.46304090835383,4.87222317227305,4.14582398509466,2.29408640602033,2.24490476425664,2.4590339958857,0,0,0,1.37968373152366,5.29816946959713,2.81308047821288,0,0,6.94118082715765,5.0757036758563,6.24727853425117,0,0,0,6.47697122679831,5.55286130031493,3.16230222357219,0,1.41940085208269,1.06839362200353,1.14020871547503,3.95928295134085,1.32745138339963,1.69946445308487,0.906970670894253,0.943025398779491,0.885905678642318,0.307435147943927,1.03371317267288,1.45413491791002,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0.220528398054962,1.6488625294148,1.61464426695906,1.56813604813205,1.55184047204077,1.64140899745061,0.874442509889552,3.8939313422207,0,1.03193433981611,0.740778109478847,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0.138199973804424,1.90934123603023,7.75023184273782,3.65975040828328,3.34816556547584,1.88179466413022,1.31017538247707,1.07891477107857,2.39695021603474,1.57053565190418,0.648074866458964,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,0,0.352071715937262,0,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.410843828659309,0.129920822977795,0.358053391334963,0.596044064343795,0.480781798079875,0,0.504832249740738,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,1.73870634628971,1.31377732815827,1.28206136987086,2.14368379079066,6.01886524842436,0,0,0,0,0,0,0,0,0,0,4.04770655578289,1.59609949360412,1.36586884603307,0.486213434136588,1.25767897576789,1.83843508450014,0.888986911206461,1.64828045791115,1.60459604795908,0.758091635291392,1.2673964994512,0.754505365544305,1.21733959710847,1.08842759088278,1.26358031702349,1.42888107384922,0.579421629724277,0.578727661391115,0.824171801606613,1.03039244094078,1.71434626192708,1.77475806159337,0.715308569841963,1.30811774969096,0.846984423737976,0.930760686808441,1.09756783723664,1.05227884575137,0.543216455383447,2.24456908663095,1.30498519936592,0.492522411877817,0.409231043169689,1.39443157067369,0.964533054905707,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,0.882365676478062,1.15933917810211
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,2.33166941804883,2.56965453026354,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,1.42825492201902,2.65042249141936,0,0,0,0,0,0,0,0,0,0.837548997004143,0,0.30559649555362,3.24091444021034,1.13897344639282,5.21918448310842,0.075726193333184,0.0755715601067855,4.05810284182349,0,0,0.539703191637817,0,0,0.842666520790511,0.170430322578058,0,0,0,0,0,0,0,0,0.505524445014783,0.68510327831436,0.517875767294343,3.11728492036132,2.25530924795977,1.52232739156071,1.61430848079241,1.50722640552623,1.99900802130698,3.64433114856059,0,1.3013942122792,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0,0.457500602818626,0,0,0,0,0,2.44414473240759,0.870848794270651,3.0326731012041,0,0,0,0,0,0,0,0,0,0.862271971731369,0.945530400839096,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.492502392237286,0,0.146199987425332,0,0,0,0,0,0.793351699990633,5.97207101498655,4.87697010906921,1.67527699718721,2.01683524623343,1.55664630691409,2.85338439168839,0.949058123089023,1.15289268306808,1.25667604400135,2.18852119245266,1.55971269695296,0,0.432276099749388,1.39398891278057,3.79335801906163,2.17072173958485,3.38123207019241,3.05476991767971,4.07300223052014,1.8936671370386,1.89709611372772,2.65698266363284,1.41298855057237,2.46794327843601,0,0.83422552858047,0.786235980452812,0.899448449539415,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,1.43768206527355,1.11642284300551,0.624075346229121,0.505157755894224,1.07638448113147,0,2.95605104266567,4.9267767060326,8.31121379854332,6.78980343100753,6.33663670378956,4.35516269348721,3.80869825417622,1.75620283072019,6.46304090835383,4.87222317227305,4.14582398509466,2.29408640602033,2.24490476425664,2.4590339958857,0,0,0,1.37968373152366,5.29816946959713,2.81308047821288,0,0,6.94118082715765,5.0757036758563,6.24727853425117,0,0,0,6.47697122679831,5.55286130031493,3.16230222357219,0,1.41940085208269,1.06839362200353,1.14020871547503,3.95928295134085,1.32745138339963,1.69946445308487,0.906970670894253,0.943025398779491,0.885905678642318,0.307435147943927,1.03371317267288,1.45413491791002,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0.220528398054962,1.6488625294148,1.61464426695906,1.56813604813205,1.55184047204077,1.64140899745061,0.874442509889552,3.8939313422207,0,1.03193433981611,0.740778109478847,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0.138199973804424,1.90934123603023,7.75023184273782,3.65975040828328,3.34816556547584,1.88179466413022,1.31017538247707,1.07891477107857,2.39695021603474,1.57053565190418,0.648074866458964,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,0,0.352071715937262,0,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.410843828659309,0.129920822977795,0.358053391334963,0.596044064343795,0.480781798079875,0,0.504832249740738,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,1.73870634628971,1.31377732815827,1.28206136987086,2.14368379079066,6.01886524842436,0,0,0,0,0,0,0,0,0,0,4.04770655578289,1.59609949360412,1.36586884603307,0.486213434136588,1.25767897576789,1.83843508450014,0.888986911206461,1.64828045791115,1.60459604795908,0.758091635291392,1.2673964994512,0.754505365544305,1.21733959710847,1.08842759088278,1.26358031702349,1.42888107384922,0.579421629724277,0.578727661391115,0.824171801606613,1.03039244094078,1.71434626192708,1.77475806159337,0.715308569841963,1.30811774969096,0.846984423737976,0.930760686808441,1.09756783723664,1.05227884575137,0.543216455383447,2.24456908663095,1.30498519936592,0.492522411877817,0.409231043169689,1.39443157067369,0.964533054905707,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,0.882365676478062,1.15933917810211
|short_description=p@chr11:96213264..96213282,+
|short_description=p5@Hoxb2
}}
}}

Latest revision as of 01:36, 26 September 2015

Short description:p5@Hoxb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Hoxb2_5end
Coexpression cluster:MCL_coexpression_mm9:2011
Association with transcript: NA
EntrezGene:Hoxb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Hoxb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D73.12
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F88.31
lung, embryo E15.CNhs11020.432-17C56.79
lung, embryo E16.CNhs10998.458-17B66.34
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E37.75
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial fold1.20e-1320
cavitated compound organ3.00e-1321
lung8.11e-1314
respiratory tube8.11e-1314
respiration organ8.11e-1314
pair of lungs8.11e-1314
lung primordium8.11e-1314
lung bud8.11e-1314
epithelial bud7.86e-1117
subdivision of trunk1.49e-1066
trunk region element2.83e-1079
trunk5.22e-1090
thoracic cavity element1.31e-0917
thoracic segment organ1.31e-0917
thoracic cavity1.31e-0917
thoracic segment of trunk1.31e-0917
respiratory primordium1.31e-0917
endoderm of foregut1.31e-0917
kidney4.07e-0914
kidney mesenchyme4.07e-0914
upper urinary tract4.07e-0914
kidney rudiment4.07e-0914
kidney field4.07e-0914
renal system8.60e-0819
urinary system structure3.02e-0718
breast5.25e-076
chest5.25e-076
intermediate mesoderm7.49e-0714
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:96213264..96213282,%2B&oldid=4225790"