FFCP PHASE1:Mm9::chr4:104039935..104039965,+: Difference between revisions
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{{FFCP|EntrezGene=13131|HGNC=|MCL_coexpression_id=13|UniProt=P97318,B2RRQ8|association_with_transcript=-199bp_to_NM_010014,uc008txv.1,uc008txw.1,uc012dhu.1_5end|description=CAGE_peak_6_at_Dab1_5end|id=chr4:104039935..104039965,+|ontology_enrichment_celltype=CL:0000117!4.12e-14!23;CL:0000337!4.12e-14!23;CL:0000540!2.32e-12!33;CL:0000047!2.32e-12!33;CL:0000031!2.32e-12!33;CL:0000404!2.32e-12!33;CL:0000393!7.24e-09!39;CL:0000211!7.24e-09!39;CL:0000221!1.84e-08!44;CL:0000133!1.84e-08!44;CL:0002319!4.59e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.15e-22,23;CL:0000337,3.15e-22,23;CL:0000540,2.64e-14,33;CL:0000047,2.64e-14,33;CL:0000031,2.64e-14,33;CL:0000404,2.64e-14,33;CL:0002609,9.42e-14,6;CL:0000393,1.63e-11,39;CL:0000211,1.63e-11,39;CL:0002319,1.67e-11,43;CL:0000221,3.76e-11,44;CL:0000133,3.76e-11,44;CL:0000120,2.38e-08,3;CL:0002613,5.63e-08,3;CL:0002608,2.79e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.84e-21!73;UBERON:0005743!3.84e-21!73;UBERON:0000033!8.39e-21!63;UBERON:0000073!5.54e-20!75;UBERON:0001016!5.54e-20!75;UBERON:0002020!6.02e-20!34;UBERON:0003056!4.24e-19!49;UBERON:0004121!4.38e-19!102;UBERON:0000924!4.38e-19!102;UBERON:0006601!4.38e-19!102;UBERON:0001049!2.04e-18!52;UBERON:0005068!2.04e-18!52;UBERON:0006241!2.04e-18!52;UBERON:0007135!2.04e-18!52;UBERON:0002346!3.76e-18!71;UBERON:0003075!3.76e-18!71;UBERON:0007284!3.76e-18!71;UBERON:0000955!1.57e-17!50;UBERON:0006238!1.57e-17!50;UBERON:0002791!2.89e-17!29;UBERON:0003528!2.89e-17!29;UBERON:0001893!2.89e-17!29;UBERON:0002616!1.09e-16!49;UBERON:0003080!9.13e-16!40;UBERON:0002780!1.69e-15!39;UBERON:0001890!1.69e-15!39;UBERON:0006240!1.69e-15!39;UBERON:0000956!7.12e-14!21;UBERON:0001869!7.12e-14!21;UBERON:0000203!7.12e-14!21;UBERON:0007811!8.98e-11!86;UBERON:0002619!1.27e-10!17;UBERON:0000153!5.51e-10!94;UBERON:0002021!4.32e-09!10;UBERON:0000411!4.32e-09!10;UBERON:0001950!4.32e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.14e-37,29;UBERON:0002791,2.14e-37,29;UBERON:0001893,2.14e-37,29;UBERON:0002020,6.91e-37,34;UBERON:0000956,3.28e-32,21;UBERON:0001869,3.28e-32,21;UBERON:0000203,3.28e-32,21;UBERON:0000955,2.72e-30,47;UBERON:0006238,2.72e-30,47;UBERON:0001017,8.10e-30,73;UBERON:0000073,2.40e-29,54;UBERON:0002780,7.63e-29,39;UBERON:0001890,7.63e-29,39;UBERON:0006240,7.63e-29,39;UBERON:0001016,8.06e-29,75;UBERON:0001049,1.40e-28,52;UBERON:0005068,1.40e-28,52;UBERON:0006241,1.40e-28,52;UBERON:0007135,1.40e-28,52;UBERON:0002616,2.45e-28,46;UBERON:0003080,5.66e-28,40;UBERON:0003056,1.04e-25,49;UBERON:0002346,1.64e-25,64;UBERON:0003075,1.64e-25,64;UBERON:0007284,1.64e-25,64;UBERON:0004121,3.92e-24,95;UBERON:0000924,3.92e-24,95;UBERON:0006601,3.92e-24,95;UBERON:0002619,8.34e-24,17;UBERON:0010371,1.69e-21,73;UBERON:0002021,1.71e-17,10;UBERON:0000411,1.71e-17,10;UBERON:0001950,1.71e-17,10;UBERON:0010314,1.31e-15,92;UBERON:0000025,2.02e-09,114;UBERON:0004111,2.23e-08,122;UBERON:0001954,5.07e-08,7;UBERON:0003022,5.07e-08,7;UBERON:0002421,5.07e-08,7;UBERON:0000349,5.07e-08,7;UBERON:0002600,5.07e-08,7;UBERON:0000369,9.30e-08,5;UBERON:0002435,9.30e-08,5;UBERON:0000204,9.30e-08,5;UBERON:0010082,9.30e-08,5;UBERON:0002420,6.87e-07,8;UBERON:0007245,6.87e-07,8;UBERON:0010009,6.87e-07,8;UBERON:0010011,6.87e-07,8;UBERON:0000454,6.87e-07,8|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,3.03474691289397,2.64495489636016,5.07065122804943,0,0,0,0,0,0,0,2.48855069540346,3.78016627328734,2.73422449756797,0.285650984403804,0.662605622854841,1.95985278743926,2.01275489138296,1.83843757322004,1.10115880999389,0.383062014255563,0.153606533256243,2.50583946687368,3.11057988248193,2.6045668527838,0.279182999001381,1.12552522006336,0,0.589257170947335,1.13897344639282,1.67759501242771,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.63502717310392,2.09446706813455,0,0,0,0,0.299581278809645,0.457500602818626,1.50785222535437,1.91206752211504,2.04572365864264,0.62336413367868,1.62241263067758,0.611036183101898,0,0,0,0.780722657776222,0.229902104433473,0.720248519221397,0.753524089178575,1.02054748726992,1.2811372028485,0.937017245597288,0.258703370739016,0,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,3.39585220851639,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.581857461502877,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0.716906393857656,0.445597348164788,0,0.404810701674894,0,0.790575555893047,4.81981974632711,0,0.178065603667255,0.488660878060728,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.419437377702843,0,0,0,0,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,2.25900737046827,1.38097570952153,2.86447756719698,0.859265911718438,2.74033007908257,1.5107877947794,4.05013500139084,1.35096360967266,2.71885445390523,2.5888015587591,0.103787347584177,0.798049746802062,1.02440163452481,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,1.44224540067226,0.64183841918363,0,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,1.23625770240992,0.294397840268795,0.342869252385415,0.532427418478012,0,0.436039249896986,0.846984423737976,0.25384382367503,0.365855945745545,0,0.679020569229309,0,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p6@Dab1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13131 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=P97318,B2RRQ8 | |||
|association_with_transcript=-199bp_to_NM_010014,uc008txv.1,uc008txw.1,uc012dhu.1_5end | |||
|cluster_id=chr4:104039935..104039965,+ | |||
|description=CAGE_peak_6_at_Dab1_5end | |||
|id=chr4:104039935..104039965,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.12e-14!23;CL:0000337!4.12e-14!23;CL:0000540!2.32e-12!33;CL:0000047!2.32e-12!33;CL:0000031!2.32e-12!33;CL:0000404!2.32e-12!33;CL:0000393!7.24e-09!39;CL:0000211!7.24e-09!39;CL:0000221!1.84e-08!44;CL:0000133!1.84e-08!44;CL:0002319!4.59e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.15e-22,23;CL:0000337,3.15e-22,23;CL:0000540,2.64e-14,33;CL:0000047,2.64e-14,33;CL:0000031,2.64e-14,33;CL:0000404,2.64e-14,33;CL:0002609,9.42e-14,6;CL:0000393,1.63e-11,39;CL:0000211,1.63e-11,39;CL:0002319,1.67e-11,43;CL:0000221,3.76e-11,44;CL:0000133,3.76e-11,44;CL:0000120,2.38e-08,3;CL:0002613,5.63e-08,3;CL:0002608,2.79e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.84e-21!73;UBERON:0005743!3.84e-21!73;UBERON:0000033!8.39e-21!63;UBERON:0000073!5.54e-20!75;UBERON:0001016!5.54e-20!75;UBERON:0002020!6.02e-20!34;UBERON:0003056!4.24e-19!49;UBERON:0004121!4.38e-19!102;UBERON:0000924!4.38e-19!102;UBERON:0006601!4.38e-19!102;UBERON:0001049!2.04e-18!52;UBERON:0005068!2.04e-18!52;UBERON:0006241!2.04e-18!52;UBERON:0007135!2.04e-18!52;UBERON:0002346!3.76e-18!71;UBERON:0003075!3.76e-18!71;UBERON:0007284!3.76e-18!71;UBERON:0000955!1.57e-17!50;UBERON:0006238!1.57e-17!50;UBERON:0002791!2.89e-17!29;UBERON:0003528!2.89e-17!29;UBERON:0001893!2.89e-17!29;UBERON:0002616!1.09e-16!49;UBERON:0003080!9.13e-16!40;UBERON:0002780!1.69e-15!39;UBERON:0001890!1.69e-15!39;UBERON:0006240!1.69e-15!39;UBERON:0000956!7.12e-14!21;UBERON:0001869!7.12e-14!21;UBERON:0000203!7.12e-14!21;UBERON:0007811!8.98e-11!86;UBERON:0002619!1.27e-10!17;UBERON:0000153!5.51e-10!94;UBERON:0002021!4.32e-09!10;UBERON:0000411!4.32e-09!10;UBERON:0001950!4.32e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.14e-37,29;UBERON:0002791,2.14e-37,29;UBERON:0001893,2.14e-37,29;UBERON:0002020,6.91e-37,34;UBERON:0000956,3.28e-32,21;UBERON:0001869,3.28e-32,21;UBERON:0000203,3.28e-32,21;UBERON:0000955,2.72e-30,47;UBERON:0006238,2.72e-30,47;UBERON:0001017,8.10e-30,73;UBERON:0000073,2.40e-29,54;UBERON:0002780,7.63e-29,39;UBERON:0001890,7.63e-29,39;UBERON:0006240,7.63e-29,39;UBERON:0001016,8.06e-29,75;UBERON:0001049,1.40e-28,52;UBERON:0005068,1.40e-28,52;UBERON:0006241,1.40e-28,52;UBERON:0007135,1.40e-28,52;UBERON:0002616,2.45e-28,46;UBERON:0003080,5.66e-28,40;UBERON:0003056,1.04e-25,49;UBERON:0002346,1.64e-25,64;UBERON:0003075,1.64e-25,64;UBERON:0007284,1.64e-25,64;UBERON:0004121,3.92e-24,95;UBERON:0000924,3.92e-24,95;UBERON:0006601,3.92e-24,95;UBERON:0002619,8.34e-24,17;UBERON:0010371,1.69e-21,73;UBERON:0002021,1.71e-17,10;UBERON:0000411,1.71e-17,10;UBERON:0001950,1.71e-17,10;UBERON:0010314,1.31e-15,92;UBERON:0000025,2.02e-09,114;UBERON:0004111,2.23e-08,122;UBERON:0001954,5.07e-08,7;UBERON:0003022,5.07e-08,7;UBERON:0002421,5.07e-08,7;UBERON:0000349,5.07e-08,7;UBERON:0002600,5.07e-08,7;UBERON:0000369,9.30e-08,5;UBERON:0002435,9.30e-08,5;UBERON:0000204,9.30e-08,5;UBERON:0010082,9.30e-08,5;UBERON:0002420,6.87e-07,8;UBERON:0007245,6.87e-07,8;UBERON:0010009,6.87e-07,8;UBERON:0010011,6.87e-07,8;UBERON:0000454,6.87e-07,8 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,3.03474691289397,2.64495489636016,5.07065122804943,0,0,0,0,0,0,0,2.48855069540346,3.78016627328734,2.73422449756797,0.285650984403804,0.662605622854841,1.95985278743926,2.01275489138296,1.83843757322004,1.10115880999389,0.383062014255563,0.153606533256243,2.50583946687368,3.11057988248193,2.6045668527838,0.279182999001381,1.12552522006336,0,0.589257170947335,1.13897344639282,1.67759501242771,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.63502717310392,2.09446706813455,0,0,0,0,0.299581278809645,0.457500602818626,1.50785222535437,1.91206752211504,2.04572365864264,0.62336413367868,1.62241263067758,0.611036183101898,0,0,0,0.780722657776222,0.229902104433473,0.720248519221397,0.753524089178575,1.02054748726992,1.2811372028485,0.937017245597288,0.258703370739016,0,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,3.39585220851639,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.581857461502877,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0.716906393857656,0.445597348164788,0,0.404810701674894,0,0.790575555893047,4.81981974632711,0,0.178065603667255,0.488660878060728,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.419437377702843,0,0,0,0,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,2.25900737046827,1.38097570952153,2.86447756719698,0.859265911718438,2.74033007908257,1.5107877947794,4.05013500139084,1.35096360967266,2.71885445390523,2.5888015587591,0.103787347584177,0.798049746802062,1.02440163452481,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,1.44224540067226,0.64183841918363,0,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,1.23625770240992,0.294397840268795,0.342869252385415,0.532427418478012,0,0.436039249896986,0.846984423737976,0.25384382367503,0.365855945745545,0,0.679020569229309,0,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p6@Dab1 | |||
}} |
Latest revision as of 02:17, 26 September 2015
Short description: | p6@Dab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dab1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -199bp_to_NM_010014, uc008txv.1, uc008txw.1, uc012dhu.1_5end |
EntrezGene: | Dab1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.15e-22 | 23 |
neuroblast (sensu Vertebrata) | 3.15e-22 | 23 |
neuron | 2.64e-14 | 33 |
neuronal stem cell | 2.64e-14 | 33 |
neuroblast | 2.64e-14 | 33 |
electrically signaling cell | 2.64e-14 | 33 |
neuron of cerebral cortex | 9.42e-14 | 6 |
electrically responsive cell | 1.63e-11 | 39 |
electrically active cell | 1.63e-11 | 39 |
neural cell | 1.67e-11 | 43 |
ectodermal cell | 3.76e-11 | 44 |
neurectodermal cell | 3.76e-11 | 44 |
granule cell | 2.38e-08 | 3 |
striatum neuron | 5.63e-08 | 3 |
hippocampal neuron | 2.79e-07 | 3 |