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FFCP PHASE1:Mm9::chr9:106724330..106724347,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=321006
|EntrezGene=321006
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q80TR8
|UniProt=Q80TR8
|association_with_transcript=23bp_to_ENSMUST00000045973,NM_001015507,uc009rkp.2_5end
|association_with_transcript=23bp_to_ENSMUST00000045973,NM_001015507,uc009rkp.2_5end
|cluster_id=chr9:106724330..106724347,+
|description=CAGE_peak_2_at_Vprbp_5end
|description=CAGE_peak_2_at_Vprbp_5end
|id=chr9:106724330..106724347,+
|id=chr9:106724330..106724347,+
|ontology_enrichment_celltype=CL:0000542!1.26e-08!13;CL:0000051!1.26e-08!13;CL:0000838!2.08e-08!12;CL:0000084!4.57e-08!11;CL:0000827!4.57e-08!11;CL:0000791!5.78e-07!9;CL:0000789!5.78e-07!9;CL:0002420!5.78e-07!9;CL:0002419!5.78e-07!9;CL:0000790!5.78e-07!9
|ontology_enrichment_celltype=CL:0000542!1.26e-08!13;CL:0000051!1.26e-08!13;CL:0000838!2.08e-08!12;CL:0000084!4.57e-08!11;CL:0000827!4.57e-08!11;CL:0000791!5.78e-07!9;CL:0000789!5.78e-07!9;CL:0002420!5.78e-07!9;CL:0002419!5.78e-07!9;CL:0000790!5.78e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,3.73e-19,12;CL:0000084,2.82e-18,11;CL:0000827,2.82e-18,11;CL:0000542,1.96e-17,13;CL:0000051,1.96e-17,13;CL:0000791,1.87e-15,9;CL:0000789,1.87e-15,9;CL:0002420,1.87e-15,9;CL:0002419,1.87e-15,9;CL:0000790,1.87e-15,9;CL:0000624,8.29e-14,8;CL:0000738,1.38e-12,17;CL:0002087,1.38e-12,17;CL:0000988,6.24e-12,32;CL:0002032,6.24e-12,32;CL:0000037,6.24e-12,32;CL:0000837,6.24e-12,32;CL:0000893,6.99e-11,6;CL:0002489,6.99e-11,6;CL:0000898,6.99e-11,6;CL:0000809,6.99e-11,6;CL:0000810,6.99e-11,6;CL:0000895,6.99e-11,6;CL:0000808,6.99e-11,6;CL:0000894,6.99e-11,6;CL:0000806,6.99e-11,6;CL:0000807,6.99e-11,6;CL:0000805,6.99e-11,6;CL:0002425,6.99e-11,6;CL:0002436,6.99e-11,6;CL:0002427,6.99e-11,6;CL:0002428,6.99e-11,6;CL:0002429,6.99e-11,6;CL:0002433,6.99e-11,6;CL:0002431,6.99e-11,6;CL:0002432,6.99e-11,6;CL:0002320,3.12e-09,46;CL:0000134,3.12e-09,46;CL:0000034,3.60e-09,97;CL:0002031,1.34e-07,25;CL:0000723,2.00e-07,91;CL:0000048,2.00e-07,91;CL:0000219,3.86e-07,54
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.12e-09,46
|phase1_expression=0.640595388419176,0,1.36499771816861,0.60492842261366,0,0.839396359559449,0,1.29123323441576,14.6420271037733,11.2350972634557,1.54096171402954,2.07407613387875,2.05440875917447,1.92324885321794,0.999329285446988,0.607425802169478,0.699561878128147,0.157731082679119,0.137114433605739,0.84877930359606,0.935476191661768,1.29078236561151,2.61199789138935,0.639969691173627,0,0,1.7230479846363,0.430942465371778,0,0,0.443461021310609,0.635030673459631,0,0,0.577703239502549,0.664938581433969,1.83752420636132,1.25559489221072,0,0,0,0,0.971020706062307,0,0.506884656097573,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,1.00669563634642,4.35217285206807,3.6970317905671,0,0,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.622137673850866,1.08004750665353,0.841299845405528,0.571301968807607,0,0.979926393719632,1.24599112323707,0.919218786610021,1.10115880999389,0.383062014255563,0.307213066512487,0.923204014111357,0.914876436024097,1.56274011167028,0.837548997004143,0.56276261003168,0.45839474333043,1.17851434189467,0.284743361598206,0.745597783301202,0.530083353332288,0.529000920747499,2.31891590961342,0,2.719885334831,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,2.54805239706646,0,0,0.253359865475099,0,0.68510327831436,0.517875767294343,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,0.470354828542819,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0.220841518460394,1.45462575940567,0,0,0,0.510914110417183,4.07371423320129,0.599902730993408,4.3203877204842,0.149790639404823,0.457500602818626,0.628271760564322,1.04294592115366,0.255715457330331,0.62336413367868,0.486723789203273,0.611036183101898,0.497627882440372,0.505445516867349,0.210441855886474,0.780722657776222,0.919608417733892,0.180062129805349,0.90422890701429,1.08858398642125,0.640568601424249,0.655912071918102,0,0.646703978798527,1.13463648100692,1.23165786914764,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.796137067273973,2.1066395619397,1.80143534980301,1.13665399758237,0.621377317606506,0.234526059981096,0.540186184383045,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0,0.467061369468678,0.658239399653922,0.656669856316381,0.324275238183423,0,0,0.402619256281115,0.841159794256509,0.514523061896422,0.660837565967596,0,0.853153002140936,0,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0,0.648414149624083,0.398282546508734,0.948339504765408,0.913988100877831,0,0.407302655690628,0,0.350679099451593,0.632365371242573,0.442830443938806,0.470996183524124,0.246794327843601,0.889357881261447,0.333690211432188,0.589676985339609,1.12431056192427,0.608580364165509,0.72353147925725,0.25462585178142,0,0.810676133875177,0.274561413188081,1.43768206527355,0,0.312037673114561,0.505157755894224,0.538192240565737,0,0.369506380333209,1.13694847062291,0.977789858652155,0.509235257325564,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0.221464689648775,1.11618338060241,0.655453258862952,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0.481651769963376,0,0.327869890753351,0,1.26203287766503,0.780877488593277,0.646270193198397,0.477937595905104,0,0,0.404810701674894,0.292255857911312,0,0,0.141940085208269,1.06839362200353,1.62886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0.354680467284547,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0.661585194164886,0.16488625294148,0.484393280087717,0.482503399425247,0.596861720015682,0.492422699235184,0.582961673259701,0.370850604021019,0.683483523191411,0.619160603889667,0,0.188368457004691,0.410082683163076,0.686334519619568,5.09935289981566,4.47844647435706,4.56059913554598,0,0,0.609958401380546,0.756037385752609,0.209088296014469,0.218362563746178,0.134864346384821,0.330613822901344,0,0.777689839750757,0,1.12738587736838,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0.844780627453891,0.352071715937262,0.911430693907651,3.77493639932559,3.38217769156408,2.30424005006292,0.316011120628178,0.810900861160657,0.821687657318618,0.25984164595559,0.358053391334963,0.198681354781265,0.721172697119813,0.295379054349154,0.706765149637033,0.685861259894999,0.604957110821043,0.682205165178267,0.865906574762965,0.350630706544707,0.453460767230423,0.665957860122194,0.986852422704233,0.503653849092235,0.965947970160952,0.187682475451182,0.36630324853453,0,0,1.6942555278512,0.920650473014354,0,0.515559547031063,0,0,1.35004500046361,0.45032120322422,0.906284817968409,0,1.03787347584177,2.39414924040619,0.170733605754134,0.486213434136588,0.209613162627982,1.2869045591501,0.666740183404846,0.412070114477788,0,1.51618327058278,1.01391719956096,0.188626341386076,0.280924522409647,0.448176066834085,0.631790158511746,0.952587382566147,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.0941093804153306,0.592302255241736,0.73171189149109,0,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0,0.464810523557898,0.578719832943424,0.749431733813838,0,0.214871054048298,0.57386499620653,0.220591419119515,0
|phase1_expression=0.640595388419176,0,1.36499771816861,0.60492842261366,0,0.839396359559449,0,1.29123323441576,14.6420271037733,11.2350972634557,1.54096171402954,2.07407613387875,2.05440875917447,1.92324885321794,0.999329285446988,0.607425802169478,0.699561878128147,0.157731082679119,0.137114433605739,0.84877930359606,0.935476191661768,1.29078236561151,2.61199789138935,0.639969691173627,0,0,1.7230479846363,0.430942465371778,0,0,0.443461021310609,0.635030673459631,0,0,0.577703239502549,0.664938581433969,1.83752420636132,1.25559489221072,0,0,0,0,0.971020706062307,0,0.506884656097573,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,1.00669563634642,4.35217285206807,3.6970317905671,0,0,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.622137673850866,1.08004750665353,0.841299845405528,0.571301968807607,0,0.979926393719632,1.24599112323707,0.919218786610021,1.10115880999389,0.383062014255563,0.307213066512487,0.923204014111357,0.914876436024097,1.56274011167028,0.837548997004143,0.56276261003168,0.45839474333043,1.17851434189467,0.284743361598206,0.745597783301202,0.530083353332288,0.529000920747499,2.31891590961342,0,2.719885334831,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,2.54805239706646,0,0,0.253359865475099,0,0.68510327831436,0.517875767294343,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,0.470354828542819,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0.220841518460394,1.45462575940567,0,0,0,0.510914110417183,4.07371423320129,0.599902730993408,4.3203877204842,0.149790639404823,0.457500602818626,0.628271760564322,1.04294592115366,0.255715457330331,0.62336413367868,0.486723789203273,0.611036183101898,0.497627882440372,0.505445516867349,0.210441855886474,0.780722657776222,0.919608417733892,0.180062129805349,0.90422890701429,1.08858398642125,0.640568601424249,0.655912071918102,0,0.646703978798527,1.13463648100692,1.23165786914764,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.796137067273973,2.1066395619397,1.80143534980301,1.13665399758237,0.621377317606506,0.234526059981096,0.540186184383045,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0,0.467061369468678,0.658239399653922,0.656669856316381,0.324275238183423,0,0,0.402619256281115,0.841159794256509,0.514523061896422,0.660837565967596,0,0.853153002140936,0,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0,0.648414149624083,0.398282546508734,0.948339504765408,0.913988100877831,0,0.407302655690628,0,0.350679099451593,0.632365371242573,0.442830443938806,0.470996183524124,0.246794327843601,0.889357881261447,0.333690211432188,0.589676985339609,1.12431056192427,0.608580364165509,0.72353147925725,0.25462585178142,0,0.810676133875177,0.274561413188081,1.43768206527355,0,0.312037673114561,0.505157755894224,0.538192240565737,0,0.369506380333209,1.13694847062291,0.977789858652155,0.509235257325564,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0.221464689648775,1.11618338060241,0.655453258862952,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0.481651769963376,0,0.327869890753351,0,1.26203287766503,0.780877488593277,0.646270193198397,0.477937595905104,0,0,0.404810701674894,0.292255857911312,0,0,0.141940085208269,1.06839362200353,1.62886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0.354680467284547,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0.661585194164886,0.16488625294148,0.484393280087717,0.482503399425247,0.596861720015682,0.492422699235184,0.582961673259701,0.370850604021019,0.683483523191411,0.619160603889667,0,0.188368457004691,0.410082683163076,0.686334519619568,5.09935289981566,4.47844647435706,4.56059913554598,0,0,0.609958401380546,0.756037385752609,0.209088296014469,0.218362563746178,0.134864346384821,0.330613822901344,0,0.777689839750757,0,1.12738587736838,0.299033092087958,0.165458490457098,0.388902376688095,0.129159823477731,0.844780627453891,0.352071715937262,0.911430693907651,3.77493639932559,3.38217769156408,2.30424005006292,0.316011120628178,0.810900861160657,0.821687657318618,0.25984164595559,0.358053391334963,0.198681354781265,0.721172697119813,0.295379054349154,0.706765149637033,0.685861259894999,0.604957110821043,0.682205165178267,0.865906574762965,0.350630706544707,0.453460767230423,0.665957860122194,0.986852422704233,0.503653849092235,0.965947970160952,0.187682475451182,0.36630324853453,0,0,1.6942555278512,0.920650473014354,0,0.515559547031063,0,0,1.35004500046361,0.45032120322422,0.906284817968409,0,1.03787347584177,2.39414924040619,0.170733605754134,0.486213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|short_description=p2@Vprbp
|short_description=p2@Vprbp
}}
}}

Latest revision as of 03:07, 26 September 2015

Short description:p2@Vprbp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Vprbp_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 23bp_to_ENSMUST00000045973, NM_001015507, uc009rkp.2_5end
EntrezGene:Vprbp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Vprbp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.32
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.56
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell3.73e-1912
T cell2.82e-1811
pro-T cell2.82e-1811
lymphocyte1.96e-1713
common lymphoid progenitor1.96e-1713
mature alpha-beta T cell1.87e-159
alpha-beta T cell1.87e-159
immature T cell1.87e-159
mature T cell1.87e-159
immature alpha-beta T cell1.87e-159
CD4-positive, alpha-beta T cell8.29e-148
leukocyte1.38e-1217
nongranular leukocyte1.38e-1217
hematopoietic cell6.24e-1232
hematopoietic oligopotent progenitor cell6.24e-1232
hematopoietic stem cell6.24e-1232
hematopoietic multipotent progenitor cell6.24e-1232
thymocyte6.99e-116
double negative thymocyte6.99e-116
naive T cell6.99e-116
double-positive, alpha-beta thymocyte6.99e-116
CD4-positive, alpha-beta thymocyte6.99e-116
naive thymus-derived CD4-positive, alpha-beta T cell6.99e-116
DN4 thymocyte6.99e-116
DN1 thymic pro-T cell6.99e-116
DN2 thymocyte6.99e-116
DN3 thymocyte6.99e-116
immature single positive thymocyte6.99e-116
early T lineage precursor6.99e-116
mature CD4 single-positive thymocyte6.99e-116
resting double-positive thymocyte6.99e-116
double-positive blast6.99e-116
CD69-positive double-positive thymocyte6.99e-116
CD69-positive, CD4-positive single-positive thymocyte6.99e-116
CD4-positive, CD8-intermediate double-positive thymocyte6.99e-116
CD24-positive, CD4 single-positive thymocyte6.99e-116
connective tissue cell3.12e-0946
mesenchymal cell3.12e-0946
stem cell3.60e-0997
hematopoietic lineage restricted progenitor cell1.34e-0725
somatic stem cell2.00e-0791
multi fate stem cell2.00e-0791
motile cell3.86e-0754

Uber anatomy
Ontology termp-valuen
connective tissue3.12e-0946
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