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FFCP PHASE1:Mm9::chr11:98636568..98636574,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=217166
|EntrezGene=217166
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q3UV55
|UniProt=Q3UV55
|association_with_transcript=-12bp_to_NM_145434,uc007lhh.1_5end
|association_with_transcript=-12bp_to_NM_145434,uc007lhh.1_5end
|cluster_id=chr11:98636568..98636574,-
|description=CAGE_peak_9_at_Nr1d1_5end
|description=CAGE_peak_9_at_Nr1d1_5end
|id=chr11:98636568..98636574,-
|id=chr11:98636568..98636574,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.96e-12!63;UBERON:0004121!6.93e-12!102;UBERON:0000924!6.93e-12!102;UBERON:0006601!6.93e-12!102;UBERON:0000955!2.84e-11!50;UBERON:0006238!2.84e-11!50;UBERON:0002346!1.06e-10!71;UBERON:0003075!1.06e-10!71;UBERON:0007284!1.06e-10!71;UBERON:0002616!1.15e-10!49;UBERON:0001049!7.03e-10!52;UBERON:0005068!7.03e-10!52;UBERON:0006241!7.03e-10!52;UBERON:0007135!7.03e-10!52;UBERON:0007023!1.18e-09!51;UBERON:0000073!1.59e-09!75;UBERON:0001016!1.59e-09!75;UBERON:0001017!6.03e-09!73;UBERON:0005743!6.03e-09!73;UBERON:0002021!1.64e-07!10;UBERON:0000411!1.64e-07!10;UBERON:0001950!1.64e-07!10;UBERON:0003056!2.26e-07!49;UBERON:0004111!3.68e-07!122;UBERON:0003080!5.85e-07!40
|ontology_enrichment_uberon=UBERON:0000033!2.96e-12!63;UBERON:0004121!6.93e-12!102;UBERON:0000924!6.93e-12!102;UBERON:0006601!6.93e-12!102;UBERON:0000955!2.84e-11!50;UBERON:0006238!2.84e-11!50;UBERON:0002346!1.06e-10!71;UBERON:0003075!1.06e-10!71;UBERON:0007284!1.06e-10!71;UBERON:0002616!1.15e-10!49;UBERON:0001049!7.03e-10!52;UBERON:0005068!7.03e-10!52;UBERON:0006241!7.03e-10!52;UBERON:0007135!7.03e-10!52;UBERON:0007023!1.18e-09!51;UBERON:0000073!1.59e-09!75;UBERON:0001016!1.59e-09!75;UBERON:0001017!6.03e-09!73;UBERON:0005743!6.03e-09!73;UBERON:0002021!1.64e-07!10;UBERON:0000411!1.64e-07!10;UBERON:0001950!1.64e-07!10;UBERON:0003056!2.26e-07!49;UBERON:0004111!3.68e-07!122;UBERON:0003080!5.85e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.03e-15,47;UBERON:0006238,1.03e-15,47;UBERON:0000073,1.79e-15,54;UBERON:0007023,5.08e-15,51;UBERON:0002616,1.76e-14,46;UBERON:0002021,7.84e-14,10;UBERON:0000411,7.84e-14,10;UBERON:0001950,7.84e-14,10;UBERON:0001049,2.21e-13,52;UBERON:0005068,2.21e-13,52;UBERON:0006241,2.21e-13,52;UBERON:0007135,2.21e-13,52;UBERON:0001017,5.86e-13,73;UBERON:0004121,7.81e-13,95;UBERON:0000924,7.81e-13,95;UBERON:0006601,7.81e-13,95;UBERON:0001016,2.10e-12,75;UBERON:0003080,2.78e-11,40;UBERON:0003528,1.05e-10,29;UBERON:0002791,1.05e-10,29;UBERON:0001893,1.05e-10,29;UBERON:0002346,1.12e-10,64;UBERON:0003075,1.12e-10,64;UBERON:0007284,1.12e-10,64;UBERON:0010371,1.57e-10,73;UBERON:0002780,2.98e-10,39;UBERON:0001890,2.98e-10,39;UBERON:0006240,2.98e-10,39;UBERON:0003056,2.47e-09,49;UBERON:0002619,4.27e-09,17;UBERON:0004111,1.29e-08,122;UBERON:0002020,1.48e-08,34;UBERON:0000956,1.53e-08,21;UBERON:0001869,1.53e-08,21;UBERON:0000203,1.53e-08,21;UBERON:0010314,2.13e-08,92;UBERON:0002950,3.38e-07,4;UBERON:0001891,3.38e-07,4;UBERON:0009616,3.38e-07,4;UBERON:0010286,3.38e-07,4;UBERON:0000025,7.52e-07,114
|phase1_expression=0,0.348975407639361,0.454999239389536,1.51232105653415,0.500895729946347,0.16787927191189,0,0.129123323441576,0.281577444303333,0,0,0,0,0,0,0,0,0,0.274228867211478,0,1.36069264241712,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.950117097281869,0,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,1.1330713617802,0.709638518536602,0.183546752161682,1.56478268869608,0.218025156380447,0.659058548203415,0.388859798148567,0,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,1.92109152660777,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,1.10115880999389,3.19218345212969,2.76491759861238,0.131886287730194,0,0,3.62937898701795,1.68828783009504,1.22238598221448,0.589257170947335,0.854230084794618,0,0.984440513331393,0.529000920747499,3.47837386442013,0,0,2.15881276655127,0.649776417447669,0,2.24711072210803,0.170430322578058,0,0.35333957451034,0.422530259330042,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0,0.45673551887624,0.776813650941515,1.92974780784272,0,0,0.922461989024234,0.452167921657868,0.940709657085638,1.0053327306374,0,2.31358971071859,0,0,0.662524555381181,0,0,4.09893115816166,2.72280718857492,1.53274233125155,0,0,0,2.39665023047716,2.28750301409313,0.125654352112864,2.9550134432687,2.04572365864264,1.0389402227978,1.46017136760982,0,0.248813941220186,0,1.47309299120532,0.130120442962704,0,0.180062129805349,0.452114453507145,0.476255494059295,0.2562274405697,0.281105173679186,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0,0.656669856316381,0.972825714550269,1.60819986167866,0.878200461164203,0,2.73376933133365,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,1.42358718463353,0.164698954724011,0,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.316182685621286,1.18088118383682,1.09899109488962,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0.757736633841335,1.07638448113147,0,2.77129785249907,0,0.162964976442026,0,0,0,0,0.195133647857799,0.788175720530955,0.44292937929755,0,0.983179888294428,0.345369963731791,0.289298117163023,0,0.54390568381871,0,1.37968373152366,1.12385412991454,0.937693492737625,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0.891194696329576,0,0,0.292255857911312,0.395287777946524,4.17717711348349,0.567760340833074,0,0.162886959353576,0.824850614862677,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0,0.258717367565509,0,0,0.713475270408282,0.987294123612726,1.522324745573,0,0,0.220528398054962,2.80306630000516,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0.291480836629851,1.66882771809459,0.170870880797853,0.412773735926445,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.495920734352016,0.26175594198403,0.129614973291793,1.86401793926078,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.39061315453185,0.314578033277133,0,0.864090018773596,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0,2.0405734525369,0,0,0.167884616364078,1.35232715822533,0.563047426353546,1.64836461840539,0.428736758158132,1.50471631210609,1.6942555278512,2.76195141904306,1.14579102687879,5.15559547031063,2.05524755931193,2.2661816921691,0.675022500231806,5.85417564191487,4.53142408984205,5.1776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.287177344778066,0.952587382566147,0,0.578727661391115,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0,0.182927972872773,0.789209134313529,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0.765153328275374,0.441182838239031,0.231867835620421
|phase1_expression=0,0.348975407639361,0.454999239389536,1.51232105653415,0.500895729946347,0.16787927191189,0,0.129123323441576,0.281577444303333,0,0,0,0,0,0,0,0,0,0.274228867211478,0,1.36069264241712,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.950117097281869,0,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,1.1330713617802,0.709638518536602,0.183546752161682,1.56478268869608,0.218025156380447,0.659058548203415,0.388859798148567,0,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,1.92109152660777,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,1.10115880999389,3.19218345212969,2.76491759861238,0.131886287730194,0,0,3.62937898701795,1.68828783009504,1.22238598221448,0.589257170947335,0.854230084794618,0,0.984440513331393,0.529000920747499,3.47837386442013,0,0,2.15881276655127,0.649776417447669,0,2.24711072210803,0.170430322578058,0,0.35333957451034,0.422530259330042,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0,0.45673551887624,0.776813650941515,1.92974780784272,0,0,0.922461989024234,0.452167921657868,0.940709657085638,1.0053327306374,0,2.31358971071859,0,0,0.662524555381181,0,0,4.09893115816166,2.72280718857492,1.53274233125155,0,0,0,2.39665023047716,2.28750301409313,0.125654352112864,2.9550134432687,2.04572365864264,1.0389402227978,1.46017136760982,0,0.248813941220186,0,1.47309299120532,0.130120442962704,0,0.180062129805349,0.452114453507145,0.476255494059295,0.2562274405697,0.281105173679186,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0,0.656669856316381,0.972825714550269,1.60819986167866,0.878200461164203,0,2.73376933133365,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,1.42358718463353,0.164698954724011,0,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.316182685621286,1.18088118383682,1.09899109488962,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0.757736633841335,1.07638448113147,0,2.77129785249907,0,0.162964976442026,0,0,0,0,0.195133647857799,0.788175720530955,0.44292937929755,0,0.983179888294428,0.345369963731791,0.289298117163023,0,0.54390568381871,0,1.37968373152366,1.12385412991454,0.937693492737625,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0.891194696329576,0,0,0.292255857911312,0.395287777946524,4.17717711348349,0.567760340833074,0,0.162886959353576,0.824850614862677,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0,0.258717367565509,0,0,0.713475270408282,0.987294123612726,1.522324745573,0,0,0.220528398054962,2.80306630000516,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0.291480836629851,1.66882771809459,0.170870880797853,0.412773735926445,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.495920734352016,0.26175594198403,0.129614973291793,1.86401793926078,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.39061315453185,0.314578033277133,0,0.864090018773596,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0,2.0405734525369,0,0,0.167884616364078,1.35232715822533,0.563047426353546,1.64836461840539,0.428736758158132,1.50471631210609,1.6942555278512,2.76195141904306,1.14579102687879,5.15559547031063,2.05524755931193,2.2661816921691,0.675022500231806,5.85417564191487,4.53142408984205,5.1776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.287177344778066,0.952587382566147,0,0.578727661391115,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0,0.182927972872773,0.789209134313529,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0.765153328275374,0.441182838239031,0.231867835620421
|short_description=p9@Nr1d1
|short_description=p9@Nr1d1
}}
}}

Latest revision as of 03:24, 26 September 2015

Short description:p9@Nr1d1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Nr1d1_5end
Coexpression cluster:NA
Association with transcript: -12bp_to_NM_145434, uc007lhh.1_5end
EntrezGene:Nr1d1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Nr1d1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain1.03e-1547
future brain1.03e-1547
regional part of nervous system1.79e-1554
adult organism5.08e-1551
regional part of brain1.76e-1446
occipital lobe7.84e-1410
visual cortex7.84e-1410
neocortex7.84e-1410
neural tube2.21e-1352
neural rod2.21e-1352
future spinal cord2.21e-1352
neural keel2.21e-1352
central nervous system5.86e-1373
ectoderm-derived structure7.81e-1395
ectoderm7.81e-1395
presumptive ectoderm7.81e-1395
nervous system2.10e-1275
anterior neural tube2.78e-1140
brain grey matter1.05e-1029
regional part of telencephalon1.05e-1029
telencephalon1.05e-1029
neurectoderm1.12e-1064
neural plate1.12e-1064
presumptive neural plate1.12e-1064
ecto-epithelium1.57e-1073
regional part of forebrain2.98e-1039
forebrain2.98e-1039
future forebrain2.98e-1039
pre-chordal neural plate2.47e-0949
regional part of cerebral cortex4.27e-0917
anatomical conduit1.29e-08122
gray matter1.48e-0834
cerebral cortex1.53e-0821
cerebral hemisphere1.53e-0821
pallium1.53e-0821
structure with developmental contribution from neural crest2.13e-0892
regional part of midbrain3.38e-074
midbrain3.38e-074
presumptive midbrain3.38e-074
midbrain neural tube3.38e-074
tube7.52e-07114
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