FFCP PHASE1:Mm9::chr17:27957479..27957517,-: Difference between revisions
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{{FFCP|EntrezGene=224647|HGNC=|MCL_coexpression_id=175|UniProt=B2KF52,A2RT11,Q3TT38,B2KF54|association_with_transcript=0bp_to_ENSMUST00000075076,ENSMUST00000114863,NM_001033279,NM_001044719,uc008bpp.1,uc008bpq.1,uc008bpr.1_5end|description=CAGE_peak_1_at_D17Wsu92e_5end|id=chr17:27957479..27957517,-|ontology_enrichment_celltype=CL:0000066!1.97e-08!25;CL:0000223!1.84e-07!20;CL:0000063!5.38e-07!66|ontology_enrichment_celltype_v019_2=CL:0000066,1.97e-08,25;CL:0000223,1.84e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.90e-10!130;UBERON:0000925!2.90e-10!130;UBERON:0006595!2.90e-10!130;UBERON:0001007!8.33e-10!128;UBERON:0001555!8.33e-10!128;UBERON:0007026!8.33e-10!128;UBERON:0004921!1.56e-09!126;UBERON:0004185!1.56e-09!126;UBERON:0002365!2.30e-09!25;UBERON:0002330!2.30e-09!25;UBERON:0009854!7.32e-09!23;UBERON:0009856!7.32e-09!23;UBERON:0002107!9.37e-09!22;UBERON:0007499!9.37e-09!22;UBERON:0006925!9.37e-09!22;UBERON:0009497!9.37e-09!22;UBERON:0000015!9.37e-09!22;UBERON:0002423!9.37e-09!22;UBERON:0006235!9.37e-09!22;UBERON:0008835!9.37e-09!22;UBERON:0003894!9.37e-09!22;UBERON:0004161!9.37e-09!22;UBERON:0008836!9.37e-09!22;UBERON:0000160!3.54e-08!43;UBERON:0005409!7.85e-08!59;UBERON:0005172!1.00e-07!49;UBERON:0005173!1.00e-07!49;UBERON:0002417!1.00e-07!49;UBERON:0000916!1.00e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.01e-09,118;UBERON:0000925,2.01e-09,118;UBERON:0006595,2.01e-09,118;UBERON:0002365,2.30e-09,25;UBERON:0002330,2.30e-09,25;UBERON:0001007,5.53e-09,116;UBERON:0001555,5.53e-09,116;UBERON:0007026,5.53e-09,116;UBERON:0009854,7.32e-09,23;UBERON:0009856,7.32e-09,23;UBERON:0002107,9.37e-09,22;UBERON:0007499,9.37e-09,22;UBERON:0006925,9.37e-09,22;UBERON:0009497,9.37e-09,22;UBERON:0000015,9.37e-09,22;UBERON:0002423,9.37e-09,22;UBERON:0006235,9.37e-09,22;UBERON:0008835,9.37e-09,22;UBERON:0003894,9.37e-09,22;UBERON:0004161,9.37e-09,22;UBERON:0008836,9.37e-09,22;UBERON:0004921,9.96e-09,114;UBERON:0000160,2.76e-08,31;UBERON:0005172,1.00e-07,49;UBERON:0005173,1.00e-07,49;UBERON:0002417,1.00e-07,49;UBERON:0000916,1.00e-07,49;UBERON:0005409,1.68e-07,47|phase1_expression=8.0074423552397,26.5221309805914,32.7599452360466,45.9745601186382,48.0859900748493,18.4667199103079,12.3814699515629,3.74457637980571,19.2880549347783,20.5976783163354,16.265706981423,20.6609891797921,6.50562773738582,4.45844052336887,10.6595123781012,13.7683181825082,21.6864182219725,10.4102514568218,9.32378148519024,5.94145512517242,12.246233781754,2.38298282882125,1.82839852397255,9.11956809922418,11.6998733344257,28.711598205751,23.6919097887491,17.6686410802429,11.0213583284697,13.3575968772763,10.4213340007993,6.35030673459631,7.99584223859941,31.6963362030877,14.1537293678125,11.6364251750945,14.7001936508906,9.62622750694888,7.813353445238,3.14114246384279,7.05877785637217,8.19654581950135,9.71020706062307,3.14742044938943,3.24406179902447,5.87349606917381,10.1710874765245,5.01457859675027,4.61340983742391,6.41618666945135,5.03951117851305,4.31257693094915,12.751478060388,17.4086914082723,11.7632829699862,4.88792928468299,3.15186783932632,6.18806510732931,1.82084814773638,1.5869729378161,1.90149421051854,6.43804610931351,10.6715375533337,19.3478439215501,13.8441290759376,17.0515227587064,10.1864037576258,12.2949857702897,1.8664130215526,1.4850653216486,0.841299845405528,4.57041575046086,3.3130281142742,1.5923803897944,2.01275489138296,0,6.60695285996332,7.15049093277051,7.83393319606842,1.31886287730194,2.8361169516747,2.6045668527838,6.70039197603314,3.93933827022176,5.19514042441154,3.53554302568401,2.98980529678116,2.23679334990361,10.677393259979,6.65029728939713,14.7830889237856,39.5794983411438,80.9165887112223,52.8909127805061,62.3785360749762,64.9638986291137,25.7013288841106,3.91989741929533,1.81850203222008,4.59341446863442,7.46470124816407,7.69958864485907,15.2883143823987,7.11066703153331,9.09262372247099,9.88103475352884,10.1104889002957,39.1650707436376,11.6522047641227,20.0396887737513,8.50078101154066,10.0473607843007,15.2206228188999,14.3186508524991,12.5819916635204,20.3579877954074,17.3036477414062,17.930320258069,11.4999371753484,6.63244084784378,8.61281921995535,8.727754556434,11.1835056730873,5.5628351432194,5.65506108396329,16.860165643767,8.74650408893218,6.59893004092748,6.4805815807263,5.39246301857362,5.49000723382352,3.39266750704734,10.6032835317289,10.9957646652042,5.40248915854856,6.48965052271031,5.29564692021645,8.70848794270651,7.32895999457657,11.1534183619831,3.6433724029557,3.90833577536904,3.42118046630164,3.46621081022145,4.35433594568498,3.33095672740609,3.84177070694888,5.95017752699736,1.72454394346274,3.02569728268511,4.04687585577082,2.84954452155847,4.44875598760957,3.1342694986995,5.76189981942242,1.99034266818493,6.31991868581911,3.86021860672073,6.53576048609863,1.86413195281952,3.75241695969754,4.50155153652537,6.39210786080068,6.09969118416952,4.01094493507183,3.72054311600653,5.36546802799238,6.889155199663,7.240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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224647 | |||
|HGNC= | |||
|MCL_coexpression_id=175 | |||
|TSSclassifier=NA | |||
|UniProt=B2KF52,A2RT11,Q3TT38,B2KF54 | |||
|association_with_transcript=0bp_to_ENSMUST00000075076,ENSMUST00000114863,NM_001033279,NM_001044719,uc008bpp.1,uc008bpq.1,uc008bpr.1_5end | |||
|cluster_id=chr17:27957479..27957517,- | |||
|description=CAGE_peak_1_at_D17Wsu92e_5end | |||
|id=chr17:27957479..27957517,- | |||
|ontology_enrichment_celltype=CL:0000066!1.97e-08!25;CL:0000223!1.84e-07!20;CL:0000063!5.38e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.97e-08,25;CL:0000223,1.84e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.90e-10!130;UBERON:0000925!2.90e-10!130;UBERON:0006595!2.90e-10!130;UBERON:0001007!8.33e-10!128;UBERON:0001555!8.33e-10!128;UBERON:0007026!8.33e-10!128;UBERON:0004921!1.56e-09!126;UBERON:0004185!1.56e-09!126;UBERON:0002365!2.30e-09!25;UBERON:0002330!2.30e-09!25;UBERON:0009854!7.32e-09!23;UBERON:0009856!7.32e-09!23;UBERON:0002107!9.37e-09!22;UBERON:0007499!9.37e-09!22;UBERON:0006925!9.37e-09!22;UBERON:0009497!9.37e-09!22;UBERON:0000015!9.37e-09!22;UBERON:0002423!9.37e-09!22;UBERON:0006235!9.37e-09!22;UBERON:0008835!9.37e-09!22;UBERON:0003894!9.37e-09!22;UBERON:0004161!9.37e-09!22;UBERON:0008836!9.37e-09!22;UBERON:0000160!3.54e-08!43;UBERON:0005409!7.85e-08!59;UBERON:0005172!1.00e-07!49;UBERON:0005173!1.00e-07!49;UBERON:0002417!1.00e-07!49;UBERON:0000916!1.00e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.01e-09,118;UBERON:0000925,2.01e-09,118;UBERON:0006595,2.01e-09,118;UBERON:0002365,2.30e-09,25;UBERON:0002330,2.30e-09,25;UBERON:0001007,5.53e-09,116;UBERON:0001555,5.53e-09,116;UBERON:0007026,5.53e-09,116;UBERON:0009854,7.32e-09,23;UBERON:0009856,7.32e-09,23;UBERON:0002107,9.37e-09,22;UBERON:0007499,9.37e-09,22;UBERON:0006925,9.37e-09,22;UBERON:0009497,9.37e-09,22;UBERON:0000015,9.37e-09,22;UBERON:0002423,9.37e-09,22;UBERON:0006235,9.37e-09,22;UBERON:0008835,9.37e-09,22;UBERON:0003894,9.37e-09,22;UBERON:0004161,9.37e-09,22;UBERON:0008836,9.37e-09,22;UBERON:0004921,9.96e-09,114;UBERON:0000160,2.76e-08,31;UBERON:0005172,1.00e-07,49;UBERON:0005173,1.00e-07,49;UBERON:0002417,1.00e-07,49;UBERON:0000916,1.00e-07,49;UBERON:0005409,1.68e-07,47 | |||
|phase1_expression=8.0074423552397,26.5221309805914,32.7599452360466,45.9745601186382,48.0859900748493,18.4667199103079,12.3814699515629,3.74457637980571,19.2880549347783,20.5976783163354,16.265706981423,20.6609891797921,6.50562773738582,4.45844052336887,10.6595123781012,13.7683181825082,21.6864182219725,10.4102514568218,9.32378148519024,5.94145512517242,12.246233781754,2.38298282882125,1.82839852397255,9.11956809922418,11.6998733344257,28.711598205751,23.6919097887491,17.6686410802429,11.0213583284697,13.3575968772763,10.4213340007993,6.35030673459631,7.99584223859941,31.6963362030877,14.1537293678125,11.6364251750945,14.7001936508906,9.62622750694888,7.813353445238,3.14114246384279,7.05877785637217,8.19654581950135,9.71020706062307,3.14742044938943,3.24406179902447,5.87349606917381,10.1710874765245,5.01457859675027,4.61340983742391,6.41618666945135,5.03951117851305,4.31257693094915,12.751478060388,17.4086914082723,11.7632829699862,4.88792928468299,3.15186783932632,6.18806510732931,1.82084814773638,1.5869729378161,1.90149421051854,6.43804610931351,10.6715375533337,19.3478439215501,13.8441290759376,17.0515227587064,10.1864037576258,12.2949857702897,1.8664130215526,1.4850653216486,0.841299845405528,4.57041575046086,3.3130281142742,1.5923803897944,2.01275489138296,0,6.60695285996332,7.15049093277051,7.83393319606842,1.31886287730194,2.8361169516747,2.6045668527838,6.70039197603314,3.93933827022176,5.19514042441154,3.53554302568401,2.98980529678116,2.23679334990361,10.677393259979,6.65029728939713,14.7830889237856,39.5794983411438,80.9165887112223,52.8909127805061,62.3785360749762,64.9638986291137,25.7013288841106,3.91989741929533,1.81850203222008,4.59341446863442,7.46470124816407,7.69958864485907,15.2883143823987,7.11066703153331,9.09262372247099,9.88103475352884,10.1104889002957,39.1650707436376,11.6522047641227,20.0396887737513,8.50078101154066,10.0473607843007,15.2206228188999,14.3186508524991,12.5819916635204,20.3579877954074,17.3036477414062,17.930320258069,11.4999371753484,6.63244084784378,8.61281921995535,8.727754556434,11.1835056730873,5.5628351432194,5.65506108396329,16.860165643767,8.74650408893218,6.59893004092748,6.4805815807263,5.39246301857362,5.49000723382352,3.39266750704734,10.6032835317289,10.9957646652042,5.40248915854856,6.48965052271031,5.29564692021645,8.70848794270651,7.32895999457657,11.1534183619831,3.6433724029557,3.90833577536904,3.42118046630164,3.46621081022145,4.35433594568498,3.33095672740609,3.84177070694888,5.95017752699736,1.72454394346274,3.02569728268511,4.04687585577082,2.84954452155847,4.44875598760957,3.1342694986995,5.76189981942242,1.99034266818493,6.31991868581911,3.86021860672073,6.53576048609863,1.86413195281952,3.75241695969754,4.50155153652537,6.39210786080068,6.09969118416952,4.01094493507183,3.72054311600653,5.36546802799238,6.889155199663,7.24063339619314,7.38753588355929,9.64718833595683,8.62579925809461,9.00155472693308,9.66286215074677,8.62188789112922,3.39585220851639,27.4247589876552,21.4204958997471,1.91959425481711,4.41249676534833,6.95884291139304,9.88249270654378,7.11609740303585,11.7939888189787,22.7773949541366,19.9285735216053,19.604146286421,16.9113001234978,12.8676297498619,16.178749355776,14.0489732418551,19.7149860521824,3.79335801906163,3.65595240351132,5.63538678365402,3.05476991767971,4.07300223052014,9.95928642442524,9.35900749439008,19.9273699772463,17.583857518234,26.6537874071089,62.2550516883013,5.6727335943472,8.05891879964132,5.8464149220062,9.73728582664814,11.3353265083636,10.9489116266011,12.9463261852865,26.1037715107807,19.7684217495419,37.3797336971122,29.0269939181433,27.7713529071959,36.118779546437,34.803098223251,69.4718670763249,9.23765950833023,1.89491411770485,2.60743962307241,3.05541154395339,3.28566347603903,4.85768146581266,5.2369600994923,12.0982861671835,4.57141917907954,7.75126413770712,5.58091690301205,5.40748938561935,9.67035898449015,9.69148692496127,15.0791283939272,28.8270012423916,12.7858710984949,10.4855963595798,6.42202359951168,7.501547941901,6.22952792431367,19.6927323219411,6.31016438832513,4.68526493155966,5.81643173878557,5.4962823529087,5.34716817797746,6.51076020814315,6.8817819284732,4.9683495844923,7.51046778098395,5.78378369559253,7.66476460124651,3.02711526234334,6.51547837414304,9.07335676348945,15.9294166007955,4.37005145078967,5.13950046840077,7.35559811048003,12.1073776081117,12.2974059177571,11.3708448994017,6.5436071305951,8.55593708123331,11.0612865277536,10.5418608574999,18.5643977846736,7.83011093233712,1.98067203434441,3.75140182969988,3.85806663056866,6.20690817747958,5.17269571046005,4.77192159746151,7.30715877875038,21.1204537257339,9.10877904714427,30.6534473296397,14.6748765117917,10.8181165886257,10.9769523369244,13.0115854963419,13.6236946788401,17.7803310344209,6.86073617438886,11.2774781326583,4.95328483111734,6.66700298530962,8.66494902221579,11.072232445403,12.5827995263587,11.728511669576,14.9748053986314,14.7873971970733,11.4560474161814,2.68885594543965,5.28630614529807,7.02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| |||
|short_description=p1@D17Wsu92e | |||
}} |
Latest revision as of 03:48, 26 September 2015
Short description: | p1@D17Wsu92e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D17Wsu92e_5end |
Coexpression cluster: | MCL_coexpression_mm9:175 |
Association with transcript: | 0bp_to_ENSMUST00000075076, ENSMUST00000114863, NM_001033279, NM_001044719, uc008bpp.1, uc008bpq.1, uc008bpr.1_5end |
EntrezGene: | D17Wsu92e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.97e-08 | 25 |
endodermal cell | 1.84e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.01e-09 | 118 |
endoderm | 2.01e-09 | 118 |
presumptive endoderm | 2.01e-09 | 118 |
exocrine gland | 2.30e-09 | 25 |
exocrine system | 2.30e-09 | 25 |
digestive system | 5.53e-09 | 116 |
digestive tract | 5.53e-09 | 116 |
primitive gut | 5.53e-09 | 116 |
digestive tract diverticulum | 7.32e-09 | 23 |
sac | 7.32e-09 | 23 |
liver | 9.37e-09 | 22 |
epithelial sac | 9.37e-09 | 22 |
digestive gland | 9.37e-09 | 22 |
epithelium of foregut-midgut junction | 9.37e-09 | 22 |
anatomical boundary | 9.37e-09 | 22 |
hepatobiliary system | 9.37e-09 | 22 |
foregut-midgut junction | 9.37e-09 | 22 |
hepatic diverticulum | 9.37e-09 | 22 |
liver primordium | 9.37e-09 | 22 |
septum transversum | 9.37e-09 | 22 |
liver bud | 9.37e-09 | 22 |
subdivision of digestive tract | 9.96e-09 | 114 |
intestine | 2.76e-08 | 31 |
abdomen element | 1.00e-07 | 49 |
abdominal segment element | 1.00e-07 | 49 |
abdominal segment of trunk | 1.00e-07 | 49 |
abdomen | 1.00e-07 | 49 |
gastrointestinal system | 1.68e-07 | 47 |